RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 CHADO15335 359 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 MSI1O43347 362 aaKnown RBP10.09□□□□□ -0.79
PRPF3-207ENST00000496202 DCXO43602 365 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 NARSO43776 548 aaKnown RBP10.09□□□□□ -0.79
PRPF3-207ENST00000496202 FTLP02792 175 aaPredicted RBP10.09□□□□□ -0.79
PRPF3-207ENST00000496202 MYBL1P10243 752 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 SRFP11831 508 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 TCF3P15923 654 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 GBP1P32455 592 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 MRE11P49959 708 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 PFKPQ01813 784 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 PDGFRLQ15198 375 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 TAF5Q15542 800 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 CCDC122Q5T0U0 273 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 ALKBH5Q6P6C2 394 aaKnown RBP10.09□□□□□ -0.79
PRPF3-207ENST00000496202 WDR59Q6PJI9 974 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 TAC4Q86UU9 113 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 UBALD2Q8IYN6 164 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 DEFB106AQ8N104 65 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 C3orf20Q8ND61 904 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 CSGALNACT1Q8TDX6 532 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 DQX1Q8TE96 717 aaKnown RBP10.09□□□□□ -0.79
PRPF3-207ENST00000496202 IRF7Q92985 503 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 RNF34Q969K3 372 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 PLD4Q96BZ4 506 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 ZFRQ96KR1 1074 aaKnown RBP10.09□□□□□ -0.79
PRPF3-207ENST00000496202 SLC2A13Q96QE2 648 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 KLF16Q9BXK1 252 aaPredicted RBP10.09□□□□□ -0.79
PRPF3-207ENST00000496202 SMOC2Q9H3U7 446 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 GKN1Q9NS71 199 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 DDIT4Q9NX09 232 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 DUS2Q9NX74 493 aaKnown RBP10.09□□□□□ -0.79
PRPF3-207ENST00000496202 RRN3Q9NYV6 651 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.09□□□□□ -0.79
PRPF3-207ENST00000496202 COX16Q9P0S2 106 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 TBC1D14Q9P2M4 693 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 SFMBT1Q9UHJ3 866 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 DUSP12Q9UNI6 340 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 NAALADL1Q9UQQ1 740 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 ZDBF2Q9HCK1 2354 aa10.09□□□□□ -0.79
PRPF3-207ENST00000496202 MYOFQ9NZM1 2061 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 A0A087X0T9 212 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 SCAMP3O14828 347 aaKnown RBP10.08□□□□□ -0.8
PRPF3-207ENST00000496202 ATMINO43313 823 aaPredicted RBP10.08□□□□□ -0.8
PRPF3-207ENST00000496202 STC2O76061 302 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 IPO7O95373 1038 aaKnown RBP10.08□□□□□ -0.8
PRPF3-207ENST00000496202 NFATC1O95644 943 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 TRUB2O95900 331 aaKnown RBP10.08□□□□□ -0.8
PRPF3-207ENST00000496202 APOEP02649 317 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 FAM228BP0C875 321 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 KRT3P12035 628 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 ALADP13716 330 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 ABCB4P21439 1286 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 SDC4P31431 198 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 NOS2P35228 1153 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 CYLC1P35663 651 aaPredicted RBP10.08□□□□□ -0.8
PRPF3-207ENST00000496202 MATKP42679 507 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 HARS2P49590 506 aaKnown RBP10.08□□□□□ -0.8
PRPF3-207ENST00000496202 SULT1E1P49888 294 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 TBX4P57082 545 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 GSDMDP57764 484 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 GPC5P78333 572 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 FCHO2Q0JRZ9 810 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 PTP4A2Q12974 167 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 NNTQ13423 1086 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 TRIP4Q15650 581 aaPredicted RBP10.08□□□□□ -0.8
PRPF3-207ENST00000496202 SLC18A3Q16572 532 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 NUGGCQ68CJ6 796 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 DCUN1D2Q6PH85 259 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 SND1Q7KZF4 910 aaKnown RBP eCLIP10.08□□□□□ -0.8
PRPF3-207ENST00000496202 CPA6Q8N4T0 437 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 KIAA1958Q8N8K9 716 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 OLIG1Q8TAK6 271 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 ADAM32Q8TC27 787 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 DNASE1L2Q92874 299 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 ATP2A3Q93084 1043 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 ZFYVE19Q96K21 471 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 CHP1Q99653 195 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 NHEJ1Q9H9Q4 299 aaPredicted RBP10.08□□□□□ -0.8
PRPF3-207ENST00000496202 PARVAQ9NVD7 372 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 CNOT8Q9UFF9 292 aaKnown RBP10.08□□□□□ -0.8
PRPF3-207ENST00000496202 ZNF510Q9Y2H8 683 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 PAXBP1Q9Y5B6 917 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 WNT6Q9Y6F9 365 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 SCINQ9Y6U3 715 aa10.08□□□□□ -0.8
PRPF3-207ENST00000496202 M0QYT0 321 aa10.07□□□□□ -0.8
PRPF3-207ENST00000496202 TNFRSF10AO00220 468 aa10.07□□□□□ -0.8
PRPF3-207ENST00000496202 IRAK2O43187 625 aa10.07□□□□□ -0.8
PRPF3-207ENST00000496202 FYNP06241 537 aa10.07□□□□□ -0.8
PRPF3-207ENST00000496202 H2AFZP0C0S5 128 aa10.07□□□□□ -0.8
PRPF3-207ENST00000496202 SLC2A3P11169 496 aa10.07□□□□□ -0.8
PRPF3-207ENST00000496202 PDGFRAP16234 1089 aa10.07□□□□□ -0.8
PRPF3-207ENST00000496202 RRM1P23921 792 aa10.07□□□□□ -0.8
PRPF3-207ENST00000496202 CORO1AP31146 461 aaKnown RBP10.07□□□□□ -0.8
PRPF3-207ENST00000496202 FLT3P36888 993 aa10.07□□□□□ -0.8
PRPF3-207ENST00000496202 GSCP56915 257 aaPredicted RBP10.07□□□□□ -0.8
PRPF3-207ENST00000496202 GFPT1Q06210 699 aaPredicted RBP10.07□□□□□ -0.8
PRPF3-207ENST00000496202 RING1Q06587 406 aa10.07□□□□□ -0.8
PRPF3-207ENST00000496202 NR1H3Q13133 447 aa10.07□□□□□ -0.8
PRPF3-207ENST00000496202 NME3Q13232 169 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms