RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 SLC47A2Q86VL8 602 aa12.94□□□□□ -0.34
MRPL55-233ENST00000495899 BBS7Q8IWZ6 715 aa12.94□□□□□ -0.34
MRPL55-233ENST00000495899 SCUBE3Q8IX30 993 aa12.94□□□□□ -0.34
MRPL55-233ENST00000495899 SPEM1Q8N4L4 309 aa12.94□□□□□ -0.34
MRPL55-233ENST00000495899 WDTC1Q8N5D0 677 aa12.94□□□□□ -0.34
MRPL55-233ENST00000495899 NDRG1Q92597 394 aaKnown RBP12.94□□□□□ -0.34
MRPL55-233ENST00000495899 ATOH1Q92858 354 aaPredicted RBP12.94□□□□□ -0.34
MRPL55-233ENST00000495899 CD101Q93033 1021 aa12.94□□□□□ -0.34
MRPL55-233ENST00000495899 NOX5Q96PH1 765 aa12.94□□□□□ -0.34
MRPL55-233ENST00000495899 ERGIC2Q96RQ1 377 aa12.94□□□□□ -0.34
MRPL55-233ENST00000495899 PHOX2BQ99453 314 aa12.94□□□□□ -0.34
MRPL55-233ENST00000495899 GANQ9H2C0 597 aa12.94□□□□□ -0.34
MRPL55-233ENST00000495899 SPHK2Q9NRA0 654 aa12.94□□□□□ -0.34
MRPL55-233ENST00000495899 ST7Q9NRC1 585 aa12.94□□□□□ -0.34
MRPL55-233ENST00000495899 RASAL2Q9UJF2 1139 aa12.94□□□□□ -0.34
MRPL55-233ENST00000495899 SIK3Q9Y2K2 1263 aa12.94□□□□□ -0.34
MRPL55-233ENST00000495899 HBS1LQ9Y450 684 aaKnown RBP12.94□□□□□ -0.34
MRPL55-233ENST00000495899 CEP83Q9Y592 693 aa12.94□□□□□ -0.34
MRPL55-233ENST00000495899 PATJQ8NI35 1801 aa12.94□□□□□ -0.34
MRPL55-233ENST00000495899 KIF26AQ9ULI4 1882 aaPredicted RBP12.93□□□□□ -0.34
MRPL55-233ENST00000495899 COL4A3Q01955 1670 aa12.93□□□□□ -0.34
MRPL55-233ENST00000495899 ZNF638Q14966 1978 aaKnown RBP12.93□□□□□ -0.34
MRPL55-233ENST00000495899 A0A0A0MRY4 1105 aa12.93□□□□□ -0.34
MRPL55-233ENST00000495899 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.93□□□□□ -0.34
MRPL55-233ENST00000495899 MDM4O15151 490 aa12.93□□□□□ -0.34
MRPL55-233ENST00000495899 HOXC11O43248 304 aaPredicted RBP12.93□□□□□ -0.34
MRPL55-233ENST00000495899 ATG13O75143 517 aa12.93□□□□□ -0.34
MRPL55-233ENST00000495899 LTFP02788 710 aa12.93□□□□□ -0.34
MRPL55-233ENST00000495899 IRF1P10914 325 aa12.93□□□□□ -0.34
MRPL55-233ENST00000495899 ADH5P11766 374 aa12.93□□□□□ -0.34
MRPL55-233ENST00000495899 ATP1A3P13637 1013 aa12.93□□□□□ -0.34
MRPL55-233ENST00000495899 CHKAP35790 457 aa12.93□□□□□ -0.34
MRPL55-233ENST00000495899 CCR3P51677 355 aa12.93□□□□□ -0.34
MRPL55-233ENST00000495899 PDCLQ13371 301 aa12.93□□□□□ -0.34
MRPL55-233ENST00000495899 SYCP1Q15431 976 aa12.93□□□□□ -0.34
MRPL55-233ENST00000495899 TRIP4Q15650 581 aaPredicted RBP12.93□□□□□ -0.34
MRPL55-233ENST00000495899 GAB4Q2WGN9 574 aa12.93□□□□□ -0.34
MRPL55-233ENST00000495899 PREPLQ4J6C6 727 aaPredicted RBP12.93□□□□□ -0.34
MRPL55-233ENST00000495899 LY6G5CQ5SRR4 150 aa12.93□□□□□ -0.34
MRPL55-233ENST00000495899 MSANTD2Q6P1R3 559 aa12.93□□□□□ -0.34
MRPL55-233ENST00000495899 MAML2Q8IZL2 1156 aaPredicted RBP12.93□□□□□ -0.34
MRPL55-233ENST00000495899 EDEM1Q92611 657 aa12.93□□□□□ -0.34
MRPL55-233ENST00000495899 WBP2Q969T9 261 aa12.93□□□□□ -0.34
MRPL55-233ENST00000495899 PLD4Q96BZ4 506 aa12.93□□□□□ -0.34
MRPL55-233ENST00000495899 FAM126AQ9BYI3 521 aaPredicted RBP12.93□□□□□ -0.34
MRPL55-233ENST00000495899 MIS12Q9H081 205 aa12.93□□□□□ -0.34
MRPL55-233ENST00000495899 FBRSL1Q9HCM7 1045 aaKnown RBP12.93□□□□□ -0.34
MRPL55-233ENST00000495899 FAM207AQ9NSI2 230 aaPredicted RBP12.93□□□□□ -0.34
MRPL55-233ENST00000495899 WDR35Q9P2L0 1181 aa12.93□□□□□ -0.34
MRPL55-233ENST00000495899 CYTH4Q9UIA0 394 aa12.93□□□□□ -0.34
MRPL55-233ENST00000495899 MUC6Q6W4X9 2439 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 TICRRQ7Z2Z1 1910 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 SLC12A8A0AV02 714 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 CHURC1-FNTBB4DL54 471 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 PIK3R2O00459 728 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 SCAMP3O14828 347 aaKnown RBP12.92□□□□□ -0.34
MRPL55-233ENST00000495899 PAPSS2O95340 614 aaPredicted RBP12.92□□□□□ -0.34
MRPL55-233ENST00000495899 KLKB1P03952 638 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 GLI1P08151 1106 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 SP9P0CG40 484 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 PNMA6AP0CW24 399 aaPredicted RBP12.92□□□□□ -0.34
MRPL55-233ENST00000495899 OPRD1P41143 372 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 CXCL12P48061 93 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 HARS2P49590 506 aaKnown RBP12.92□□□□□ -0.34
MRPL55-233ENST00000495899 JAM2P57087 298 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 POLR2FP61218 127 aaKnown RBP12.92□□□□□ -0.34
MRPL55-233ENST00000495899 YWHAZP63104 245 aaKnown RBP12.92□□□□□ -0.34
MRPL55-233ENST00000495899 TPM4P67936 248 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 IQCB1Q15051 598 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 NUDT18Q6ZVK8 323 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 ZNF677Q86XU0 584 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 TMEM25Q86YD3 366 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 FMNL3Q8IVF7 1028 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 PARP9Q8IXQ6 854 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 TMEM35BQ8NCS4 154 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 NEK11Q8NG66 645 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 CLEC4CQ8WTT0 213 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 PPP1R13BQ96KQ4 1090 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 PCMTD1Q96MG8 357 aaPredicted RBP12.92□□□□□ -0.34
MRPL55-233ENST00000495899 PNKPQ96T60 521 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 PDCL3Q9H2J4 239 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 PRMT8Q9NR22 394 aaPredicted RBP12.92□□□□□ -0.34
MRPL55-233ENST00000495899 RBM12Q9NTZ6 932 aaKnown RBP12.92□□□□□ -0.34
MRPL55-233ENST00000495899 MARK1Q9P0L2 795 aa12.92□□□□□ -0.34
MRPL55-233ENST00000495899 F5P12259 2224 aa12.91□□□□□ -0.34
MRPL55-233ENST00000495899 E5RJQ4 531 aa12.91□□□□□ -0.34
MRPL55-233ENST00000495899 PROB1E7EW31 1015 aa12.91□□□□□ -0.34
MRPL55-233ENST00000495899 PAPSS1O43252 624 aaPredicted RBP12.91□□□□□ -0.34
MRPL55-233ENST00000495899 LSM8O95777 96 aaKnown RBP12.91□□□□□ -0.34
MRPL55-233ENST00000495899 LATS1O95835 1130 aa12.91□□□□□ -0.34
MRPL55-233ENST00000495899 EGFP01133 1207 aa12.91□□□□□ -0.34
MRPL55-233ENST00000495899 FYNP06241 537 aa12.91□□□□□ -0.34
MRPL55-233ENST00000495899 NCAM1P13591 858 aa12.91□□□□□ -0.34
MRPL55-233ENST00000495899 CORO1AP31146 461 aaKnown RBP12.91□□□□□ -0.34
MRPL55-233ENST00000495899 CDH5P33151 784 aaPredicted RBP12.91□□□□□ -0.34
MRPL55-233ENST00000495899 SOX5P35711 763 aa12.91□□□□□ -0.34
MRPL55-233ENST00000495899 NBL1P41271 181 aa12.91□□□□□ -0.34
MRPL55-233ENST00000495899 STAT1P42224 750 aa12.91□□□□□ -0.34
MRPL55-233ENST00000495899 GRIA2P42262 883 aa12.91□□□□□ -0.34
MRPL55-233ENST00000495899 KLK7P49862 253 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms