RNA–Protein interactions for RNA: ENST00000495893.6

PHC3-215, Transcript of polyhomeotic homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC3, Length 12,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-215ENST00000495893 CACHD1Q5VU97 1274 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 C12orf56Q8IXR9 622 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 SYNE4Q8N205 404 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 ATPAF2Q8N5M1 289 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 MEIOBQ8N635 442 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 EEF1AKMT1Q8WVE0 214 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 PPP1R14AQ96A00 147 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 IRF2BPLQ9H1B7 796 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 PABPC3Q9H361 631 aaKnown RBP3.91□□□□□ -1.78
PHC3-215ENST00000495893 SAMSN1Q9NSI8 373 aaKnown RBP3.91□□□□□ -1.78
PHC3-215ENST00000495893 ARHGEF38Q9NXL2 777 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 CYTH4Q9UIA0 394 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 FADS3Q9Y5Q0 445 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 LTBP3Q9NS15 1303 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 FAM220BPB1ANY3 271 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 KIF28PB7ZC32 967 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 PRIM2P49643 509 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 RAB5BP61020 215 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 MPP3Q13368 585 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 HERC3Q15034 1050 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 FAM47AQ5JRC9 791 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 SAMD4BQ5PRF9 694 aaKnown RBP3.91□□□□□ -1.78
PHC3-215ENST00000495893 EIF5AL1Q6IS14 154 aaKnown RBP3.91□□□□□ -1.78
PHC3-215ENST00000495893 ARPINQ7Z6K5 226 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 HDDC3Q8N4P3 179 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 TTC39CQ8N584 583 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 ZNF564Q8TBZ8 553 aaPredicted RBP3.91□□□□□ -1.78
PHC3-215ENST00000495893 TBC1D15Q8TC07 691 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 TAMM41Q96BW9 452 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 RBM15Q96T37 977 aaKnown RBP eCLIP3.91□□□□□ -1.78
PHC3-215ENST00000495893 S100A13Q99584 98 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 MMTAG2Q9BU76 263 aaKnown RBP3.91□□□□□ -1.78
PHC3-215ENST00000495893 TRIM62Q9BVG3 475 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 DDX47Q9H0S4 455 aaKnown RBP3.91□□□□□ -1.78
PHC3-215ENST00000495893 EPB41L4BQ9H329 900 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 L2HGDHQ9H9P8 463 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 MAGEE1Q9HCI5 957 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 NUDT5Q9UKK9 219 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 PA2G4Q9UQ80 394 aaKnown RBP3.91□□□□□ -1.78
PHC3-215ENST00000495893 NEMP1O14524 444 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 GPAA1O43292 621 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 TIMM44O43615 452 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 TSPAN1O60635 241 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 BMP10O95393 424 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 TCN1P20061 433 aaPredicted RBP3.91□□□□□ -1.78
PHC3-215ENST00000495893 ITGA3P26006 1051 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 GPD2P43304 727 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 SCN1BQ07699 218 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 MXD4Q14582 209 aaPredicted RBP3.91□□□□□ -1.78
PHC3-215ENST00000495893 TBCELQ5QJ74 424 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 SPERTQ8NA61 448 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 IFT43Q96FT9 208 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 UNKQ9C0B0 810 aaKnown RBP3.91□□□□□ -1.78
PHC3-215ENST00000495893 CCDC177Q9NQR7 707 aaPredicted RBP3.91□□□□□ -1.78
PHC3-215ENST00000495893 CLIC5Q9NZA1 410 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 VTI1BQ9UEU0 232 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 CNOT8Q9UFF9 292 aaKnown RBP3.91□□□□□ -1.78
PHC3-215ENST00000495893 CCRL2O00421 344 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 FDX1P10109 184 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 PRKAR2AP13861 404 aaKnown RBP3.91□□□□□ -1.78
PHC3-215ENST00000495893 RAG1P15918 1043 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 SPDYAQ5MJ70 313 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 TTC23Q5W5X9 447 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 SEL1L3Q68CR1 1132 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 ATG16L2Q8NAA4 619 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 OR5J2Q8NH18 312 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 GAL3ST3Q96A11 431 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 PHACTR1Q9C0D0 580 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 ZNF112Q9UJU3 913 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 TMEM5Q9Y2B1 443 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 MYH13Q9UKX3 1938 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 LOC100653049A0A140TA62 436 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 TRMUO75648 421 aaKnown RBP3.91□□□□□ -1.78
PHC3-215ENST00000495893 NADKO95544 446 aaPredicted RBP3.91□□□□□ -1.78
PHC3-215ENST00000495893 NUDT7P0C024 238 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 MAZP56270 477 aaKnown RBP3.91□□□□□ -1.78
PHC3-215ENST00000495893 CENPCQ03188 943 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 CYP51A1Q16850 503 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 CCDC58Q4VC31 144 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 HEATR6Q6AI08 1181 aaKnown RBP3.91□□□□□ -1.78
PHC3-215ENST00000495893 TYW3Q6IPR3 259 aaKnown RBP3.91□□□□□ -1.78
PHC3-215ENST00000495893 PRR5LQ6MZQ0 368 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 ADHFE1Q8IWW8 467 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 ZHX1-C8orf76Q96EF9 292 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 RETREG1Q9H6L5 497 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 MLXIPQ9HAP2 919 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 EIF3LQ9Y262 564 aaKnown RBP3.91□□□□□ -1.78
PHC3-215ENST00000495893 MYH2Q9UKX2 1941 aa3.91□□□□□ -1.78
PHC3-215ENST00000495893 PLOD3O60568 738 aa3.9□□□□□ -1.78
PHC3-215ENST00000495893 VPS4BO75351 444 aa3.9□□□□□ -1.78
PHC3-215ENST00000495893 MBD4O95243 580 aa3.9□□□□□ -1.78
PHC3-215ENST00000495893 TGM2P21980 687 aa3.9□□□□□ -1.78
PHC3-215ENST00000495893 CD79BP40259 229 aa3.9□□□□□ -1.78
PHC3-215ENST00000495893 VMACQ2NL98 169 aa3.9□□□□□ -1.78
PHC3-215ENST00000495893 KLHL35Q6PF15 583 aa3.9□□□□□ -1.78
PHC3-215ENST00000495893 ZNF605Q86T29 641 aa3.9□□□□□ -1.78
PHC3-215ENST00000495893 PLCZ1Q86YW0 608 aa3.9□□□□□ -1.78
PHC3-215ENST00000495893 LINC00301Q8NCQ3 95 aa3.9□□□□□ -1.78
PHC3-215ENST00000495893 LSM14AQ8ND56 463 aaKnown RBP3.9□□□□□ -1.78
PHC3-215ENST00000495893 OR4C6Q8NH72 309 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms