RNA–Protein interactions for RNA: ENST00000495645.5

CHPF2-204, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 2 BASIC

Gene CHPF2, Length 2,709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-204ENST00000495645 RIPK2O43353 540 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 ODC1P11926 461 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 SELPP16109 830 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 MATKP42679 507 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 CDK7P50613 346 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 MSS51Q4VC12 460 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 PGBD4Q96DM1 585 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 HSFY1Q96LI6 401 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 TRIM56Q9BRZ2 755 aaKnown RBP15.41■□□□□ 0.06
CHPF2-204ENST00000495645 PIH1D1Q9NWS0 290 aaKnown RBP15.41■□□□□ 0.06
CHPF2-204ENST00000495645 H7C0C1 242 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 CAPN9O14815 690 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 ENDOD1O94919 500 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 FSBPO95073 299 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 CCL5P13501 91 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 RBL1P28749 1068 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 RPL9P32969 192 aaKnown RBP15.41■□□□□ 0.06
CHPF2-204ENST00000495645 ATP5OP48047 213 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 RAB27AP51159 221 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 MTMR3Q13615 1198 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 SMAD1Q15797 465 aaKnown RBP15.41■□□□□ 0.06
CHPF2-204ENST00000495645 TAZQ16635 292 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 ERMARDQ5T6L9 678 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 DARS2Q6PI48 645 aaKnown RBP15.41■□□□□ 0.06
CHPF2-204ENST00000495645 RSPO2Q6UXX9 243 aaPredicted RBP15.41■□□□□ 0.06
CHPF2-204ENST00000495645 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.41■□□□□ 0.062e-6■■■■□ 23.7
CHPF2-204ENST00000495645 BHLHA9Q7RTU4 235 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.41■□□□□ 0.06
CHPF2-204ENST00000495645 TRAIPQ9BWF2 469 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 TBK1Q9UHD2 729 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 PHF24Q9UPV7 400 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 SLC27A5Q9Y2P5 690 aa15.41■□□□□ 0.06
CHPF2-204ENST00000495645 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.4■□□□□ 0.06
CHPF2-204ENST00000495645 YWHAHQ04917 246 aaPredicted RBP15.4■□□□□ 0.06
CHPF2-204ENST00000495645 INTS6LQ5JSJ4 861 aaKnown RBP15.4■□□□□ 0.06
CHPF2-204ENST00000495645 COLGALT2Q8IYK4 626 aa15.4■□□□□ 0.06
CHPF2-204ENST00000495645 MAIP1Q8WWC4 291 aa15.4■□□□□ 0.06
CHPF2-204ENST00000495645 P3H4Q92791 437 aa15.4■□□□□ 0.06
CHPF2-204ENST00000495645 SLC40A1Q9NP59 571 aa15.4■□□□□ 0.06
CHPF2-204ENST00000495645 MTRF1LQ9UGC7 380 aaKnown RBP15.4■□□□□ 0.06
CHPF2-204ENST00000495645 MSI1O43347 362 aaKnown RBP15.4■□□□□ 0.06
CHPF2-204ENST00000495645 CSPG5O95196 566 aa15.4■□□□□ 0.06
CHPF2-204ENST00000495645 RPL34P49207 117 aaKnown RBP15.4■□□□□ 0.06
CHPF2-204ENST00000495645 CTCFP49711 727 aaPredicted RBP15.4■□□□□ 0.06
CHPF2-204ENST00000495645 SLC8A3P57103 927 aa15.4■□□□□ 0.06
CHPF2-204ENST00000495645 DAOAP59103 153 aa15.4■□□□□ 0.06
CHPF2-204ENST00000495645 COPS2P61201 443 aa15.4■□□□□ 0.06
CHPF2-204ENST00000495645 DENND2CQ68D51 928 aa15.4■□□□□ 0.06
CHPF2-204ENST00000495645 MICALCLQ6ZW33 695 aa15.4■□□□□ 0.06
CHPF2-204ENST00000495645 CCDC89Q8N998 374 aa15.4■□□□□ 0.06
CHPF2-204ENST00000495645 CCDC110Q8TBZ0 833 aa15.4■□□□□ 0.06
CHPF2-204ENST00000495645 RSAD2Q8WXG1 361 aa15.4■□□□□ 0.06
CHPF2-204ENST00000495645 RBM15Q96T37 977 aaKnown RBP eCLIP15.4■□□□□ 0.062e-7■■■■■ 34.7
CHPF2-204ENST00000495645 LGMNQ99538 433 aa15.4■□□□□ 0.06
CHPF2-204ENST00000495645 PRMT1Q99873 361 aaKnown RBP15.4■□□□□ 0.06
CHPF2-204ENST00000495645 NRDE2Q9H7Z3 1164 aa15.4■□□□□ 0.06
CHPF2-204ENST00000495645 APOC4-APOC2K7ER74 178 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 TMEM63AO94886 807 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 APOC2P02655 101 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 ITIH2P19823 946 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 BASP1P80723 227 aaKnown RBP15.39■□□□□ 0.05
CHPF2-204ENST00000495645 TLE2Q04725 743 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 TRIM60Q495X7 471 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 FAM171A1Q5VUB5 890 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 GRK7Q8WTQ7 553 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 DEPDC1BQ8WUY9 529 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 BCL7CQ8WUZ0 217 aaPredicted RBP15.39■□□□□ 0.05
CHPF2-204ENST00000495645 CENPIQ92674 756 aaPredicted RBP15.39■□□□□ 0.05
CHPF2-204ENST00000495645 NKD2Q969F2 451 aaPredicted RBP15.39■□□□□ 0.05
CHPF2-204ENST00000495645 CSPG4P5Q96PW8 444 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 TSEN34Q9BSV6 310 aaKnown RBP15.39■□□□□ 0.05
CHPF2-204ENST00000495645 WHRNQ9P202 907 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 SFMBT1Q9UHJ3 866 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 CDH9Q9ULB4 789 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 SCN5AQ14524 2016 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 A6NNZ2 444 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 DPYSL4O14531 572 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 KCNN4O15554 427 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 RPL17P18621 184 aaKnown RBP15.39■□□□□ 0.05
CHPF2-204ENST00000495645 DRD4P21917 467 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 GRIK1P39086 918 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 DSC1Q08554 894 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 SLC25A52Q3SY17 297 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 TUBB8Q3ZCM7 444 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 BOLA3Q53S33 107 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 FNBP1LQ5T0N5 605 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 AGBL2Q5U5Z8 902 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 CACNA2D3Q8IZS8 1091 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 TMEM86AQ8N2M4 240 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 EIF1ADQ8N9N8 165 aaKnown RBP15.39■□□□□ 0.05
CHPF2-204ENST00000495645 XPO6Q96QU8 1125 aaKnown RBP15.39■□□□□ 0.05
CHPF2-204ENST00000495645 PKMYT1Q99640 499 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 CRISPLD1Q9H336 500 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 SAYSD1Q9NPB0 183 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 PAK6Q9NQU5 681 aaPredicted RBP15.39■□□□□ 0.05
CHPF2-204ENST00000495645 DDIT4Q9NX09 232 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 MYO7AQ13402 2215 aa15.39■□□□□ 0.05
CHPF2-204ENST00000495645 M0QZQ0 153 aa15.38■□□□□ 0.05
CHPF2-204ENST00000495645 TADA2AO75478 443 aa15.38■□□□□ 0.05
CHPF2-204ENST00000495645 ZBED1O96006 694 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms