RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 GLUD2P49448 558 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 SULT1E1P49888 294 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 VCPP55072 806 aaKnown RBP10.67□□□□□ -0.7
HDAC3-214ENST00000495485 EIF3BP55884 814 aaKnown RBP10.67□□□□□ -0.7
HDAC3-214ENST00000495485 MRPS25P82663 173 aaKnown RBP10.67□□□□□ -0.7
HDAC3-214ENST00000495485 DSG1Q02413 1049 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 DEUP1Q05D60 604 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 TAZQ16635 292 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 C15orf59Q2T9L4 293 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-214ENST00000495485 ATP13A4Q4VNC1 1196 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 DCAF6Q58WW2 860 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 RAB41Q5JT25 222 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 ZNF280DQ6N043 979 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 KIAA1841Q6NSI8 718 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 VSTM1Q6UX27 236 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 LRIG3Q6UXM1 1119 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 ANKS3Q6ZW76 656 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 PDZD4Q76G19 769 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-214ENST00000495485 BEND5Q7L4P6 421 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 VPS52Q8N1B4 723 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 ARHGAP18Q8N392 663 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 MRPL43Q8N983 215 aaKnown RBP10.67□□□□□ -0.7
HDAC3-214ENST00000495485 GDPD5Q8WTR4 605 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 C2orf15Q8WU43 125 aaKnown RBP10.67□□□□□ -0.7
HDAC3-214ENST00000495485 RSAD2Q8WXG1 361 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 RAPGEF5Q92565 580 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 NKD2Q969F2 451 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-214ENST00000495485 MYLPFQ96A32 169 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 ZNF670Q9BS34 389 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 TRIM51Q9BSJ1 452 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 TTPALQ9BTX7 342 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 TRIM31Q9BZY9 425 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 FBXO44Q9H4M3 255 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 ENTPD7Q9NQZ7 604 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.67□□□□□ -0.7
HDAC3-214ENST00000495485 MARCH5Q9NX47 278 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 PRG3Q9Y2Y8 225 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-214ENST00000495485 SNX24Q9Y343 169 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 TTC28Q96AY4 2481 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 TCRBV7S2A1N4TA0A589 114 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 C3orf70A6NLC5 250 aaPredicted RBP10.66□□□□□ -0.7
HDAC3-214ENST00000495485 SGK1O00141 431 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 APOL1O14791 398 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 SASH3O75995 380 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 ADH1AP07327 375 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 MYBL2P10244 700 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 KRT10P13645 584 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 IGFBP4P22692 258 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 GRIK1P39086 918 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 KCNJ1P48048 391 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 NR2C2P49116 596 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 PLTPP55058 493 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 DAOAP59103 153 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 COL19A1Q14993 1142 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 SMTNL2Q2TAL5 461 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 KCNT1Q5JUK3 1230 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 DAB2IPQ5VWQ8 1189 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 TTC27Q6P3X3 843 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 PAQR9Q6ZVX9 377 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 Q7L0L9 218 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 GSPT2Q8IYD1 628 aaKnown RBP10.66□□□□□ -0.7
HDAC3-214ENST00000495485 DEFB106AQ8N104 65 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 ARFGAP1Q8N6T3 406 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 MICAL1Q8TDZ2 1067 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 HASPINQ8TF76 798 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 PIK3R5Q8WYR1 880 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 ART4Q93070 314 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 RNF157Q96PX1 679 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 SLC2A13Q96QE2 648 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 SMOQ99835 787 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 TCF25Q9BQ70 676 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 HINFPQ9BQA5 517 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 PAAF1Q9BRP4 392 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 PLEKHA4Q9H4M7 779 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 CERS4Q9HA82 394 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 RXFP1Q9HBX9 757 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 ALG13Q9NP73 1137 aaKnown RBP10.66□□□□□ -0.7
HDAC3-214ENST00000495485 KLHL11Q9NVR0 708 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 COMMD8Q9NX08 183 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 ANAPC5Q9UJX4 755 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 PCDHB5Q9Y5E4 795 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 BACE2Q9Y5Z0 518 aa10.66□□□□□ -0.7
HDAC3-214ENST00000495485 TSC2P49815 1807 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 ZSCAN5CA6NGD5 496 aaPredicted RBP10.65□□□□□ -0.7
HDAC3-214ENST00000495485 EPOPA6NHQ4 379 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 SPDYE4A6NLX3 237 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 A6NNZ2 444 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 H3BRJ5 948 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 M0QYT0 321 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 HCRTO43612 131 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 NCAM1P13591 858 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 FGFR3P22607 806 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 BDNFP23560 247 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 IL1R2P27930 398 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 MAGEA11P43364 429 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 RPL21P46778 160 aaKnown RBP10.65□□□□□ -0.7
HDAC3-214ENST00000495485 EIF3EP60228 445 aaKnown RBP10.65□□□□□ -0.7
HDAC3-214ENST00000495485 DHX9Q08211 1270 aaKnown RBP10.65□□□□□ -0.7
HDAC3-214ENST00000495485 IFFO1Q0D2I5 559 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 XRCC4Q13426 336 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms