RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 CFAP57Q96MR6 1250 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 CHP1Q99653 195 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 FAM204AQ9H8W3 233 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 SLC2A4RGQ9NR83 387 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 PLK2Q9NYY3 685 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 NDRG2Q9UN36 371 aaKnown RBP11.61□□□□□ -0.55
APTX-230ENST00000494649 MTF2Q9Y483 593 aaPredicted RBP11.61□□□□□ -0.55
APTX-230ENST00000494649 A0A087X0T9 212 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 TMEM221A6NGB7 291 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 M0R296 226 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 GREM1O60565 184 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 HSF2BPO75031 334 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 SERPING1P05155 500 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 FAM228BP0C875 321 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 PFKLP17858 780 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 RRM1P23921 792 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 EIF4A3P38919 411 aaKnown RBP11.6□□□□□ -0.55
APTX-230ENST00000494649 GABRB2P47870 512 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 ATP11AP98196 1134 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 PTP4A2Q12974 167 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 TRIM14Q14142 442 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 CDO1Q16878 200 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 RAB6CQ53S08 254 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 EFHC1Q5JVL4 640 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 ACAD10Q6JQN1 1059 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 KLHDC10Q6PID8 442 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 MON1BQ7L1V2 547 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 NAT16Q8N8M0 369 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 MSANTD4Q8NCY6 345 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 OR8K1Q8NGG5 319 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 CDK5RAP1Q96SZ6 601 aaKnown RBP11.6□□□□□ -0.55
APTX-230ENST00000494649 RAB6CQ9H0N0 254 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 ECT2Q9H8V3 914 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 OLA1Q9NTK5 396 aaKnown RBP11.6□□□□□ -0.55
APTX-230ENST00000494649 DDIT4Q9NX09 232 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 XPO7Q9UIA9 1087 aaKnown RBP11.6□□□□□ -0.55
APTX-230ENST00000494649 USP34Q70CQ2 3546 aa11.6□□□□□ -0.55
APTX-230ENST00000494649 AKR1B15C9JRZ8 316 aaPredicted RBP11.59□□□□□ -0.55
APTX-230ENST00000494649 M0QYT0 321 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 TRUB2O95900 331 aaKnown RBP11.59□□□□□ -0.55
APTX-230ENST00000494649 FTLP02792 175 aaPredicted RBP11.59□□□□□ -0.55
APTX-230ENST00000494649 GGCXP38435 758 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 SULT1E1P49888 294 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 TBX4P57082 545 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 SNX16P57768 344 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 COG7P83436 770 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 PFKPQ01813 784 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 TBX2Q13207 712 aaPredicted RBP11.59□□□□□ -0.55
APTX-230ENST00000494649 ARID5BQ14865 1188 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 UBXN2BQ14CS0 331 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 MLF2Q15773 248 aaPredicted RBP11.59□□□□□ -0.55
APTX-230ENST00000494649 ANO4Q32M45 955 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 ZC3H12AQ5D1E8 599 aaKnown RBP11.59□□□□□ -0.55
APTX-230ENST00000494649 LY6G5CQ5SRR4 150 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 SH3PXD2AQ5TCZ1 1133 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 SLC26A9Q7LBE3 791 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 TMEM25Q86YD3 366 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 ADGRG2Q8IZP9 1017 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 PBXIP1Q96AQ6 731 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 CHFRQ96EP1 664 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 P2RY11Q96G91 374 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 MRFAP1L1Q96HT8 127 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 DNAJC7Q99615 494 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 NUCKS1Q9H1E3 243 aaKnown RBP11.59□□□□□ -0.55
APTX-230ENST00000494649 MYO1AQ9UBC5 1043 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 WNT16Q9UBV4 365 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 LSM7Q9UK45 103 aaKnown RBP11.59□□□□□ -0.55
APTX-230ENST00000494649 AGO1Q9UL18 857 aaKnown RBP11.59□□□□□ -0.55
APTX-230ENST00000494649 GOLGA6L7A0A1B0GV03 622 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 E2F8A0AVK6 867 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 TSPAN3O60637 253 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 DAB1O75553 588 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 CYP17A1P05093 508 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 NUMBP49757 651 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 C15orf59Q2T9L4 293 aaPredicted RBP11.59□□□□□ -0.55
APTX-230ENST00000494649 ITPRIPL2Q3MIP1 535 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 DDX42Q86XP3 938 aaKnown RBP eCLIP11.59□□□□□ -0.55
APTX-230ENST00000494649 PHF13Q86YI8 300 aaPredicted RBP11.59□□□□□ -0.55
APTX-230ENST00000494649 MCOLN2Q8IZK6 566 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 TC2NQ8N9U0 490 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 SYN2Q92777 582 aaPredicted RBP11.59□□□□□ -0.55
APTX-230ENST00000494649 ATP2A3Q93084 1043 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 RNF34Q969K3 372 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 IQCDQ96DY2 449 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 MCEEQ96PE7 176 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 SLC2A13Q96QE2 648 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 TBCBQ99426 244 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 SELENOOQ9BVL4 669 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 DEF6Q9H4E7 631 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 TBC1D17Q9HA65 648 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 TMPRSS4Q9NRS4 437 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 SPTLC3Q9NUV7 552 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.59□□□□□ -0.55
APTX-230ENST00000494649 MYOFQ9NZM1 2061 aa11.59□□□□□ -0.55
APTX-230ENST00000494649 ANTXRLA6NF34 631 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 SHISA7A6NL88 538 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 NEDD8-MDP1E9PL57 170 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 SPECC1L-ADORA2AF8WAN1 911 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 TRIM24O15164 1050 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 PI15O43692 258 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms