RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 HMX3A6NHT5 357 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 IPO5O00410 1097 aaKnown RBP5.13□□□□□ -1.59
SMC4-224ENST00000494612 SYT5O00445 386 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 PRKCGP05129 697 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 ANXA6P08133 673 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 PEPDP12955 493 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 JUPP14923 745 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 CREB1P16220 341 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 NDUFB7P17568 137 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 HTR7P34969 479 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 RENBPP51606 427 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 ALDH18A1P54886 795 aaKnown RBP5.13□□□□□ -1.59
SMC4-224ENST00000494612 SSBP2P81877 361 aaPredicted RBP5.13□□□□□ -1.59
SMC4-224ENST00000494612 PRKG1Q13976 671 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 CYP1B1Q16678 543 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 BTBD16Q32M84 506 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 TMEM196Q5HYL7 178 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 L1TD1Q5T7N2 865 aaKnown RBP5.13□□□□□ -1.59
SMC4-224ENST00000494612 TSTD2Q5T7W7 516 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 LIN54Q6MZP7 749 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 RINT1Q6NUQ1 792 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 KLHL17Q6TDP4 642 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 RRAGAQ7L523 313 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 ZNF354CQ86Y25 554 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 KRT73Q86Y46 540 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 GATAD2AQ86YP4 633 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 MBD3L2Q8NHZ7 208 aaPredicted RBP5.13□□□□□ -1.59
SMC4-224ENST00000494612 SUN3Q8TAQ9 357 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 MCRS1Q96EZ8 462 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 PRR11Q96HE9 360 aaPredicted RBP5.13□□□□□ -1.59
SMC4-224ENST00000494612 PBKQ96KB5 322 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 FAM167BQ9BTA0 163 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 ALG8Q9BVK2 526 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 NKX1-2Q9UD57 310 aaPredicted RBP5.13□□□□□ -1.59
SMC4-224ENST00000494612 STEAP1Q9UHE8 339 aa5.13□□□□□ -1.59
SMC4-224ENST00000494612 ORC4O43929 436 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 PMPCBO75439 489 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 TAF5LO75529 589 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 WDR47O94967 919 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 NTSR2O95665 410 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 TTLL1O95922 423 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 ITGA5P08648 1049 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 TMEM225BP0DP42 221 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 GKP32189 559 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 TPTEP56180 551 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 EIF4A1P60842 406 aaKnown RBP5.12□□□□□ -1.59
SMC4-224ENST00000494612 DEUP1Q05D60 604 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 TEDDM1Q5T9Z0 273 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 GRHL2Q6ISB3 625 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 TTC30AQ86WT1 665 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 SCAMP5Q8TAC9 235 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 WASF1Q92558 559 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 ZDHHC12Q96GR4 267 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 WDYHV1Q96HA8 205 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 KATNAL1Q9BW62 490 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 BRD8Q9H0E9 1235 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 AGO4Q9HCK5 861 aaKnown RBP5.12□□□□□ -1.59
SMC4-224ENST00000494612 DLL3Q9NYJ7 618 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 MGAT4CQ9UBM8 478 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 VPS4AQ9UN37 437 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 PCDHB7Q9Y5E2 793 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 PCDHB2Q9Y5E7 798 aa5.12□□□□□ -1.59
SMC4-224ENST00000494612 QSOX1O00391 747 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 SPRY2O43597 315 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 PPP6R2O75170 966 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 URI1O94763 535 aaPredicted RBP5.11□□□□□ -1.59
SMC4-224ENST00000494612 NXPH3O95157 252 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 CER1O95813 267 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 ITGA2BP08514 1039 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 FAM163BP0C2L3 166 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 ALADP13716 330 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 CD19P15391 556 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 VEGFAP15692 232 aaPredicted RBP5.11□□□□□ -1.59
SMC4-224ENST00000494612 FPR3P25089 353 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 MCM5P33992 734 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 GSTM5P46439 218 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 TFF2Q03403 129 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 MTAPQ13126 283 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 BIRC3Q13489 604 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 PCID2Q5JVF3 399 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 FCRLBQ6BAA4 426 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 NAPRTQ6XQN6 538 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 Q6ZWC4 215 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 PARS2Q7L3T8 475 aaKnown RBP5.11□□□□□ -1.59
SMC4-224ENST00000494612 ZNF551Q7Z340 670 aaPredicted RBP5.11□□□□□ -1.59
SMC4-224ENST00000494612 RASAL3Q86YV0 1011 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 CPXCR1Q8N123 301 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 CSGALNACT1Q8TDX6 532 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 TRAPPC12Q8WVT3 735 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 RILPL2Q969X0 211 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 LENG8Q96PV6 779 aaPredicted RBP5.11□□□□□ -1.59
SMC4-224ENST00000494612 EIF3CQ99613 913 aaKnown RBP5.11□□□□□ -1.59
SMC4-224ENST00000494612 TMEM8AQ9HCN3 771 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 SEPSECSQ9HD40 501 aaKnown RBP5.11□□□□□ -1.59
SMC4-224ENST00000494612 HELLSQ9NRZ9 838 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 FLRT1Q9NZU1 646 aa5.11□□□□□ -1.59
SMC4-224ENST00000494612 HERC5Q9UII4 1024 aaKnown RBP5.11□□□□□ -1.59
SMC4-224ENST00000494612 CCDC189A1A4V9 331 aa5.1□□□□□ -1.59
SMC4-224ENST00000494612 KIF28PB7ZC32 967 aa5.1□□□□□ -1.59
SMC4-224ENST00000494612 NPHP1O15259 732 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms