RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 SFMBT1Q9UHJ3 866 aa34.75■■■■□ 3.15
CBX4-203ENST00000494546 AGO1Q9UL18 857 aaKnown RBP34.75■■■■□ 3.15
CBX4-203ENST00000494546 GTPBP10A4D1E9 387 aaKnown RBP34.74■■■■□ 3.15
CBX4-203ENST00000494546 LETM1O95202 739 aaPredicted RBP34.74■■■■□ 3.15
CBX4-203ENST00000494546 PON1P27169 355 aa34.74■■■■□ 3.15
CBX4-203ENST00000494546 USP8P40818 1118 aa34.74■■■■□ 3.15
CBX4-203ENST00000494546 GPT2Q8TD30 523 aa34.74■■■■□ 3.15
CBX4-203ENST00000494546 PLD4Q96BZ4 506 aa34.74■■■■□ 3.15
CBX4-203ENST00000494546 ST7Q9NRC1 585 aa34.74■■■■□ 3.15
CBX4-203ENST00000494546 EBF1Q9UH73 591 aa34.74■■■■□ 3.15
CBX4-203ENST00000494546 MED7O43513 233 aa34.73■■■■□ 3.15
CBX4-203ENST00000494546 CHRM1P11229 460 aaPredicted RBP34.73■■■■□ 3.15
CBX4-203ENST00000494546 PRKCSHP14314 528 aaPredicted RBP34.73■■■■□ 3.15
CBX4-203ENST00000494546 CHKAP35790 457 aa34.73■■■■□ 3.15
CBX4-203ENST00000494546 DGKEP52429 567 aa34.73■■■■□ 3.15
CBX4-203ENST00000494546 CRY1Q16526 586 aa34.73■■■■□ 3.15
CBX4-203ENST00000494546 HSF5Q4G112 596 aaPredicted RBP34.73■■■■□ 3.15
CBX4-203ENST00000494546 DENND1BQ6P3S1 775 aa34.73■■■■□ 3.15
CBX4-203ENST00000494546 FAM160A2Q8N612 972 aaPredicted RBP34.73■■■■□ 3.15
CBX4-203ENST00000494546 CLEC4CQ8WTT0 213 aa34.73■■■■□ 3.15
CBX4-203ENST00000494546 IRGQQ8WZA9 623 aa34.73■■■■□ 3.15
CBX4-203ENST00000494546 MIS12Q9H081 205 aa34.73■■■■□ 3.15
CBX4-203ENST00000494546 ACP6Q9NPH0 428 aa34.73■■■■□ 3.15
CBX4-203ENST00000494546 SGK1O00141 431 aa34.72■■■■□ 3.15
CBX4-203ENST00000494546 THAP12O43422 761 aa34.72■■■■□ 3.15
CBX4-203ENST00000494546 RETP07949 1114 aa34.72■■■■□ 3.15
CBX4-203ENST00000494546 GNA15P30679 374 aa34.72■■■■□ 3.15
CBX4-203ENST00000494546 EOGTQ5NDL2 527 aa34.72■■■■□ 3.15
CBX4-203ENST00000494546 USP18Q9UMW8 372 aa34.72■■■■□ 3.15
CBX4-203ENST00000494546 GPD2P43304 727 aa34.71■■■■□ 3.15
CBX4-203ENST00000494546 DGKGP49619 791 aa34.71■■■■□ 3.15
CBX4-203ENST00000494546 VWA3BQ502W6 1294 aa34.71■■■■□ 3.15
CBX4-203ENST00000494546 ANO7Q6IWH7 933 aa34.71■■■■□ 3.15
CBX4-203ENST00000494546 TMEM92Q6UXU6 159 aa34.71■■■■□ 3.15
CBX4-203ENST00000494546 CACNA2D4Q7Z3S7 1137 aa34.71■■■■□ 3.15
CBX4-203ENST00000494546 GPR161Q8N6U8 529 aaKnown RBP34.71■■■■□ 3.15
CBX4-203ENST00000494546 ZNF513Q8N8E2 541 aaPredicted RBP34.71■■■■□ 3.15
CBX4-203ENST00000494546 ZNF606Q8WXB4 792 aa34.71■■■■□ 3.15
CBX4-203ENST00000494546 GOLGA1Q92805 767 aa34.71■■■■□ 3.15
CBX4-203ENST00000494546 TUBGCP2Q9BSJ2 902 aa34.71■■■■□ 3.15
CBX4-203ENST00000494546 NDST4Q9H3R1 872 aa34.71■■■■□ 3.15
CBX4-203ENST00000494546 HBS1LQ9Y450 684 aaKnown RBP34.71■■■■□ 3.15
CBX4-203ENST00000494546 BECN2A8MW95 431 aa34.7■■■■□ 3.15
CBX4-203ENST00000494546 GOLGA6L22H0YM25 854 aa34.7■■■■□ 3.15
CBX4-203ENST00000494546 FBXO21O94952 628 aa34.7■■■■□ 3.15
CBX4-203ENST00000494546 LTFP02788 710 aa34.7■■■■□ 3.15
CBX4-203ENST00000494546 HNRNPLP14866 589 aaKnown RBP eCLIP34.7■■■■□ 3.15
CBX4-203ENST00000494546 HARS2P49590 506 aaKnown RBP34.7■■■■□ 3.15
CBX4-203ENST00000494546 SPEM2Q0P670 501 aa34.7■■■■□ 3.15
CBX4-203ENST00000494546 TRIP4Q15650 581 aaPredicted RBP34.7■■■■□ 3.15
CBX4-203ENST00000494546 TOGARAM2Q6ZUX3 1019 aa34.7■■■■□ 3.15
CBX4-203ENST00000494546 KBTBD6Q86V97 674 aa34.7■■■■□ 3.15
CBX4-203ENST00000494546 P2RY11Q96G91 374 aa34.7■■■■□ 3.15
CBX4-203ENST00000494546 TPSD1Q9BZJ3 242 aa34.7■■■■□ 3.15
CBX4-203ENST00000494546 MSI1O43347 362 aaKnown RBP34.69■■■■□ 3.14
CBX4-203ENST00000494546 PARD6AQ9NPB6 346 aa34.69■■■■□ 3.14
CBX4-203ENST00000494546 SIX2Q9NPC8 291 aa34.69■■■■□ 3.14
CBX4-203ENST00000494546 SAMSN1Q9NSI8 373 aaKnown RBP34.69■■■■□ 3.14
CBX4-203ENST00000494546 FRYLO94915 3013 aa34.68■■■■□ 3.14
CBX4-203ENST00000494546 KCNJ18B7U540 433 aa34.68■■■■□ 3.14
CBX4-203ENST00000494546 PES1O00541 588 aaKnown RBP34.68■■■■□ 3.14
CBX4-203ENST00000494546 ADAM23O75077 832 aa34.68■■■■□ 3.14
CBX4-203ENST00000494546 PENKP01210 267 aaPredicted RBP34.68■■■■□ 3.14
CBX4-203ENST00000494546 KCNJ12Q14500 433 aa34.68■■■■□ 3.14
CBX4-203ENST00000494546 CT47A1Q5JQC4 288 aaPredicted RBP34.68■■■■□ 3.14
CBX4-203ENST00000494546 MIIPQ5JXC2 388 aa34.68■■■■□ 3.14
CBX4-203ENST00000494546 FYB2Q5VWT5 728 aa34.68■■■■□ 3.14
CBX4-203ENST00000494546 TRMT11Q7Z4G4 463 aaKnown RBP34.68■■■■□ 3.14
CBX4-203ENST00000494546 SCUBE3Q8IX30 993 aa34.68■■■■□ 3.14
CBX4-203ENST00000494546 KCNV2Q8TDN2 545 aa34.68■■■■□ 3.14
CBX4-203ENST00000494546 SHC3Q92529 594 aa34.68■■■■□ 3.14
CBX4-203ENST00000494546 POLMQ9NP87 494 aaPredicted RBP34.68■■■■□ 3.14
CBX4-203ENST00000494546 DNAJC12Q9UKB3 198 aa34.68■■■■□ 3.14
CBX4-203ENST00000494546 AJAP1Q9UKB5 411 aaPredicted RBP34.68■■■■□ 3.14
CBX4-203ENST00000494546 INVSQ9Y283 1065 aa34.68■■■■□ 3.14
CBX4-203ENST00000494546 ZNF292O60281 2723 aa34.67■■■■□ 3.14
CBX4-203ENST00000494546 ALDH1A2O94788 518 aa34.67■■■■□ 3.14
CBX4-203ENST00000494546 CYBBP04839 570 aa34.67■■■■□ 3.14
CBX4-203ENST00000494546 CISD3P0C7P0 127 aa34.67■■■■□ 3.14
CBX4-203ENST00000494546 ID4P47928 161 aa34.67■■■■□ 3.14
CBX4-203ENST00000494546 MSANTD2Q6P1R3 559 aa34.67■■■■□ 3.14
CBX4-203ENST00000494546 RASSF3Q86WH2 238 aa34.67■■■■□ 3.14
CBX4-203ENST00000494546 CPXM2Q8N436 756 aa34.67■■■■□ 3.14
CBX4-203ENST00000494546 MDGA1Q8NFP4 955 aa34.67■■■■□ 3.14
CBX4-203ENST00000494546 HCN2Q9UL51 889 aa34.67■■■■□ 3.14
CBX4-203ENST00000494546 WDR87Q6ZQQ6 2873 aa34.67■■■■□ 3.14
CBX4-203ENST00000494546 PRRT4C9JH25 899 aa34.66■■■■□ 3.14
CBX4-203ENST00000494546 DCLK1O15075 740 aa34.66■■■■□ 3.14
CBX4-203ENST00000494546 TGM1P22735 817 aa34.66■■■■□ 3.14
CBX4-203ENST00000494546 ACADSBP45954 432 aa34.66■■■■□ 3.14
CBX4-203ENST00000494546 MEA1Q16626 185 aa34.66■■■■□ 3.14
CBX4-203ENST00000494546 EGFLAMQ63HQ2 1017 aa34.66■■■■□ 3.14
CBX4-203ENST00000494546 STARD13Q9Y3M8 1113 aa34.66■■■■□ 3.14
CBX4-203ENST00000494546 WASP42768 502 aa34.65■■■■□ 3.14
CBX4-203ENST00000494546 RPL34P49207 117 aaKnown RBP34.65■■■■□ 3.14
CBX4-203ENST00000494546 USP39Q53GS9 565 aaKnown RBP34.65■■■■□ 3.14
CBX4-203ENST00000494546 DDI1Q8WTU0 396 aa34.65■■■■□ 3.14
CBX4-203ENST00000494546 STK32AQ8WU08 396 aa34.65■■■■□ 3.14
CBX4-203ENST00000494546 FAM149B1Q96BN6 582 aa34.65■■■■□ 3.14
CBX4-203ENST00000494546 BCCIPQ9P287 314 aaKnown RBP eCLIP34.65■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms