RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 PHLDB2Q86SQ0 1253 aa15.55■□□□□ 0.08
ACTB-213ENST00000493945 MIB1Q86YT6 1006 aa15.55■□□□□ 0.08
ACTB-213ENST00000493945 NPAS3Q8IXF0 933 aa15.55■□□□□ 0.08
ACTB-213ENST00000493945 CELF5Q8N6W0 485 aaKnown RBP15.55■□□□□ 0.08
ACTB-213ENST00000493945 ING5Q8WYH8 240 aa15.55■□□□□ 0.08
ACTB-213ENST00000493945 NDRG1Q92597 394 aaKnown RBP15.55■□□□□ 0.08
ACTB-213ENST00000493945 FGF13Q92913 245 aa15.55■□□□□ 0.08
ACTB-213ENST00000493945 PGAP3Q96FM1 320 aaPredicted RBP15.55■□□□□ 0.08
ACTB-213ENST00000493945 PHF7Q9BWX1 381 aaPredicted RBP15.55■□□□□ 0.08
ACTB-213ENST00000493945 KCNF1Q9H3M0 494 aa15.55■□□□□ 0.08
ACTB-213ENST00000493945 CCSER2Q9H7U1 834 aa15.55■□□□□ 0.08
ACTB-213ENST00000493945 OBP2AQ9NY56 170 aa15.55■□□□□ 0.08
ACTB-213ENST00000493945 ARHGAP26Q9UNA1 814 aa15.55■□□□□ 0.08
ACTB-213ENST00000493945 NAALADL1Q9UQQ1 740 aa15.55■□□□□ 0.08
ACTB-213ENST00000493945 SLC12A8A0AV02 714 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 C2orf78A6NCI8 922 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 SLC9A3R1O14745 358 aaPredicted RBP15.54■□□□□ 0.08
ACTB-213ENST00000493945 IRAK2O43187 625 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 GABBR2O75899 941 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 FLT3P36888 993 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 CCR2P41597 374 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 TBX4P57082 545 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 CDO1Q16878 200 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 PTCRAQ6ISU1 281 aaPredicted RBP15.54■□□□□ 0.08
ACTB-213ENST00000493945 C11orf63Q6NUN7 778 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 CC2D1AQ6P1N0 951 aaPredicted RBP15.54■□□□□ 0.08
ACTB-213ENST00000493945 TMEM150AQ86TG1 271 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 TAC4Q86UU9 113 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 EMC1Q8N766 993 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 NIPA2Q8N8Q9 360 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 ARL14EPQ8N8R7 260 aaPredicted RBP15.54■□□□□ 0.08
ACTB-213ENST00000493945 ATP6V0D2Q8N8Y2 350 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 ITFG1Q8TB96 612 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 ZSCAN18Q8TBC5 510 aaPredicted RBP15.54■□□□□ 0.08
ACTB-213ENST00000493945 FAM172AQ8WUF8 416 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 SMARCD2Q92925 531 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 ARHGEF26Q96DR7 871 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 TCEAL4Q96EI5 215 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 PIWIL1Q96J94 861 aaKnown RBP15.54■□□□□ 0.08
ACTB-213ENST00000493945 CFAP57Q96MR6 1250 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 ZNF830Q96NB3 372 aaPredicted RBP15.54■□□□□ 0.08
ACTB-213ENST00000493945 NPY6RQ99463 290 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 POMKQ9H5K3 350 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 TDP1Q9NUW8 608 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.54■□□□□ 0.08
ACTB-213ENST00000493945 THG1LQ9NWX6 298 aaKnown RBP15.54■□□□□ 0.08
ACTB-213ENST00000493945 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.54■□□□□ 0.08
ACTB-213ENST00000493945 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.54■□□□□ 0.08
ACTB-213ENST00000493945 DOCK6Q96HP0 2047 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 NOTCH4Q99466 2003 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 CDH23Q9H251 3354 aa15.54■□□□□ 0.08
ACTB-213ENST00000493945 MACROD2A1Z1Q3 448 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 TYW5A2RUC4 315 aaKnown RBP15.53■□□□□ 0.08
ACTB-213ENST00000493945 SPOPO43791 374 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 PRPSAP2O60256 369 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 LATS1O95835 1130 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 TCF3P15923 654 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 GJA1P17302 382 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 PCK1P35558 622 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 SSR1P43307 286 aaKnown RBP15.53■□□□□ 0.08
ACTB-213ENST00000493945 SLC11A2P49281 568 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 RPL7AP62424 266 aaKnown RBP15.53■□□□□ 0.08
ACTB-213ENST00000493945 ATP11AP98196 1134 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 NME3Q13232 169 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 PPP2R5DQ14738 602 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 TAF5Q15542 800 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 SMAD2Q15796 467 aaKnown RBP15.53■□□□□ 0.08
ACTB-213ENST00000493945 DAAM2Q86T65 1068 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 YAF2Q8IY57 180 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 TRIM58Q8NG06 486 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 JOSD2Q8TAC2 188 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 NXPE3Q969Y0 559 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 WDCPQ9H6R7 721 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 ZFP14Q9HCL3 533 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 OSER1Q9NX31 292 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 TBC1D14Q9P2M4 693 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 GUCA1BQ9UMX6 200 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 REXO2Q9Y3B8 237 aaKnown RBP15.53■□□□□ 0.08
ACTB-213ENST00000493945 CPQQ9Y646 472 aa15.53■□□□□ 0.08
ACTB-213ENST00000493945 SYNJ2BP-COX16A0A087WUM0 186 aa15.52■□□□□ 0.08
ACTB-213ENST00000493945 KIF5CO60282 957 aa15.52■□□□□ 0.08
ACTB-213ENST00000493945 PROSCO94903 275 aa15.52■□□□□ 0.08
ACTB-213ENST00000493945 KRT7P08729 469 aa15.52■□□□□ 0.08
ACTB-213ENST00000493945 MESDQ14696 234 aa15.52■□□□□ 0.08
ACTB-213ENST00000493945 SYPL2Q5VXT5 272 aa15.52■□□□□ 0.08
ACTB-213ENST00000493945 DNAAF5Q86Y56 855 aa15.52■□□□□ 0.08
ACTB-213ENST00000493945 DEPDC1BQ8WUY9 529 aa15.52■□□□□ 0.08
ACTB-213ENST00000493945 NT5C3BQ969T7 300 aa15.52■□□□□ 0.08
ACTB-213ENST00000493945 OTUB2Q96DC9 234 aa15.52■□□□□ 0.08
ACTB-213ENST00000493945 ASB16Q96NS5 453 aa15.52■□□□□ 0.08
ACTB-213ENST00000493945 TBCBQ99426 244 aa15.52■□□□□ 0.08
ACTB-213ENST00000493945 SLC46A2Q9BY10 475 aa15.52■□□□□ 0.08
ACTB-213ENST00000493945 TRPV4Q9HBA0 871 aa15.52■□□□□ 0.08
ACTB-213ENST00000493945 OSGEPQ9NPF4 335 aa15.52■□□□□ 0.08
ACTB-213ENST00000493945 LZTFL1Q9NQ48 299 aa15.52■□□□□ 0.08
ACTB-213ENST00000493945 COX16Q9P0S2 106 aa15.52■□□□□ 0.08
ACTB-213ENST00000493945 EPS15L1Q9UBC2 864 aa15.52■□□□□ 0.08
ACTB-213ENST00000493945 PRKAG3Q9UGI9 489 aa15.52■□□□□ 0.08
ACTB-213ENST00000493945 SFMBT1Q9UHJ3 866 aa15.52■□□□□ 0.08
ACTB-213ENST00000493945 E2F8A0AVK6 867 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms