RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 CNOT8Q9UFF9 292 aaKnown RBP18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 WNT6Q9Y6F9 365 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 GOLGA6L6A8MZA4 724 aa18.65■□□□□ 0.58
PDLIM7-208ENST00000493815 ZNF263O14978 683 aa18.65■□□□□ 0.58
PDLIM7-208ENST00000493815 STC2O76061 302 aa18.65■□□□□ 0.58
PDLIM7-208ENST00000493815 TRUB2O95900 331 aaKnown RBP18.65■□□□□ 0.58
PDLIM7-208ENST00000493815 RFC1P35251 1148 aaPredicted RBP18.65■□□□□ 0.58
PDLIM7-208ENST00000493815 SCNN1AP37088 669 aa18.65■□□□□ 0.58
PDLIM7-208ENST00000493815 MATKP42679 507 aa18.65■□□□□ 0.58
PDLIM7-208ENST00000493815 GSCP56915 257 aaPredicted RBP18.65■□□□□ 0.58
PDLIM7-208ENST00000493815 RPL7AP62424 266 aaKnown RBP18.65■□□□□ 0.58
PDLIM7-208ENST00000493815 MAMLD1Q13495 774 aa18.65■□□□□ 0.58
PDLIM7-208ENST00000493815 BEND5Q7L4P6 421 aa18.65■□□□□ 0.58
PDLIM7-208ENST00000493815 YAF2Q8IY57 180 aa18.65■□□□□ 0.58
PDLIM7-208ENST00000493815 NXPE3Q969Y0 559 aa18.65■□□□□ 0.58
PDLIM7-208ENST00000493815 VCPIP1Q96JH7 1222 aa18.65■□□□□ 0.58
PDLIM7-208ENST00000493815 MCEEQ96PE7 176 aa18.65■□□□□ 0.58
PDLIM7-208ENST00000493815 LINC00597Q9H2U6 94 aa18.65■□□□□ 0.58
PDLIM7-208ENST00000493815 SH3BP1Q9Y3L3 701 aa18.65■□□□□ 0.58
PDLIM7-208ENST00000493815 GREM1O60565 184 aa18.64■□□□□ 0.57
PDLIM7-208ENST00000493815 KLKB1P03952 638 aa18.64■□□□□ 0.57
PDLIM7-208ENST00000493815 FECHP22830 423 aa18.64■□□□□ 0.57
PDLIM7-208ENST00000493815 NOS2P35228 1153 aa18.64■□□□□ 0.57
PDLIM7-208ENST00000493815 GALCP54803 685 aa18.64■□□□□ 0.57
PDLIM7-208ENST00000493815 COG7P83436 770 aa18.64■□□□□ 0.57
PDLIM7-208ENST00000493815 TNK2Q07912 1038 aa18.64■□□□□ 0.57
PDLIM7-208ENST00000493815 FCHO2Q0JRZ9 810 aa18.64■□□□□ 0.57
PDLIM7-208ENST00000493815 NME3Q13232 169 aa18.64■□□□□ 0.57
PDLIM7-208ENST00000493815 OTUD1Q5VV17 481 aaPredicted RBP18.64■□□□□ 0.57
PDLIM7-208ENST00000493815 PPP1R2P3Q6NXS1 205 aa18.64■□□□□ 0.57
PDLIM7-208ENST00000493815 CC2D1AQ6P1N0 951 aaPredicted RBP18.64■□□□□ 0.57
PDLIM7-208ENST00000493815 TMEM139Q8IV31 216 aa18.64■□□□□ 0.57
PDLIM7-208ENST00000493815 TTC8Q8TAM2 541 aa18.64■□□□□ 0.57
PDLIM7-208ENST00000493815 BAG1Q99933 345 aaPredicted RBP18.64■□□□□ 0.57
PDLIM7-208ENST00000493815 FAM204AQ9H8W3 233 aa18.64■□□□□ 0.57
PDLIM7-208ENST00000493815 DDIT4Q9NX09 232 aa18.64■□□□□ 0.57
PDLIM7-208ENST00000493815 TTC28Q96AY4 2481 aa18.64■□□□□ 0.57
PDLIM7-208ENST00000493815 SIGLEC16A6NMB1 481 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 M0QYT0 321 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 PDGFRAP16234 1089 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 ATP11AP98196 1134 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 RAB6CQ53S08 254 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 PPP1R15BQ5SWA1 713 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 PLEKHA7Q6IQ23 1121 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 RAD9BQ6WBX8 426 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 BBS7Q8IWZ6 715 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 DEPDC1BQ8WUY9 529 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 RXFP2Q8WXD0 754 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 ARHGEF26Q96DR7 871 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 TBCBQ99426 244 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 DDX23Q9BUQ8 820 aaKnown RBP18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 TRIM7Q9C029 511 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 RAB6CQ9H0N0 254 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 BRD9Q9H8M2 597 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 PARVAQ9NVD7 372 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 SORCS3Q9UPU3 1222 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 C2CD4BA6NLJ0 364 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 IGLV3-25P01717 112 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 ARSAP15289 507 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 TCF3P15923 654 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 CORO1AP31146 461 aaKnown RBP18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 SULT1E1P49888 294 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 ATXN1P54253 815 aaKnown RBP18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 TBX4P57082 545 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 C15orf59Q2T9L4 293 aaPredicted RBP18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 IER5LQ5T953 404 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 SH3PXD2AQ5TCZ1 1133 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 DCUN1D2Q6PH85 259 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 DDX42Q86XP3 938 aaKnown RBP eCLIP18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 TMTC1Q8IUR5 882 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 DENND1CQ8IV53 801 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 SERPINB11Q96P15 392 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 NPY6RQ99463 290 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 EBF3Q9H4W6 596 aa18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 THG1LQ9NWX6 298 aaKnown RBP18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 DUS2Q9NX74 493 aaKnown RBP18.63■□□□□ 0.57
PDLIM7-208ENST00000493815 HELZP42694 1942 aaKnown RBP18.62■□□□□ 0.57
PDLIM7-208ENST00000493815 BDP1A6H8Y1 2624 aa18.62■□□□□ 0.57
PDLIM7-208ENST00000493815 E2F8A0AVK6 867 aa18.62■□□□□ 0.57
PDLIM7-208ENST00000493815 IRAK2O43187 625 aa18.62■□□□□ 0.57
PDLIM7-208ENST00000493815 GSDMDP57764 484 aa18.62■□□□□ 0.57
PDLIM7-208ENST00000493815 OGDHQ02218 1023 aa18.62■□□□□ 0.57
PDLIM7-208ENST00000493815 TRIP4Q15650 581 aaPredicted RBP18.62■□□□□ 0.57
PDLIM7-208ENST00000493815 CDO1Q16878 200 aa18.62■□□□□ 0.57
PDLIM7-208ENST00000493815 SLC25A52Q3SY17 297 aa18.62■□□□□ 0.57
PDLIM7-208ENST00000493815 CCDC14Q49A88 953 aa18.62■□□□□ 0.57
PDLIM7-208ENST00000493815 ZC3H12AQ5D1E8 599 aaKnown RBP18.62■□□□□ 0.57
PDLIM7-208ENST00000493815 TRIM11Q96F44 468 aa18.62■□□□□ 0.57
PDLIM7-208ENST00000493815 FCRL2Q96LA5 508 aaPredicted RBP18.62■□□□□ 0.57
PDLIM7-208ENST00000493815 FAM83CQ9BQN1 747 aa18.62■□□□□ 0.57
PDLIM7-208ENST00000493815 PIGVQ9NUD9 493 aa18.62■□□□□ 0.57
PDLIM7-208ENST00000493815 GTSE1Q9NYZ3 720 aa18.62■□□□□ 0.57
PDLIM7-208ENST00000493815 TFR2Q9UP52 801 aa18.62■□□□□ 0.57
PDLIM7-208ENST00000493815 HBS1LQ9Y450 684 aaKnown RBP18.62■□□□□ 0.57
PDLIM7-208ENST00000493815 OTOL1A6NHN0 477 aaPredicted RBP18.61■□□□□ 0.57
PDLIM7-208ENST00000493815 MYBL1P10243 752 aa18.61■□□□□ 0.57
PDLIM7-208ENST00000493815 HTR3DQ70Z44 454 aa18.61■□□□□ 0.57
PDLIM7-208ENST00000493815 CCDC170Q8IYT3 715 aa18.61■□□□□ 0.57
PDLIM7-208ENST00000493815 OSCP1Q8WVF1 389 aa18.61■□□□□ 0.57
PDLIM7-208ENST00000493815 NT5C3BQ969T7 300 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms