RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 TLR8Q9NR97 1041 aaKnown RBP13.18□□□□□ -0.3
VPS52-220ENST00000493674 MTMR10Q9NXD2 777 aa13.18□□□□□ -0.3
VPS52-220ENST00000493674 PCSK1NQ9UHG2 260 aa13.18□□□□□ -0.3
VPS52-220ENST00000493674 MTUS1Q9ULD2 1270 aa13.18□□□□□ -0.3
VPS52-220ENST00000493674 EFR3BQ9Y2G0 817 aa13.18□□□□□ -0.3
VPS52-220ENST00000493674 ASB3Q9Y575 518 aa13.18□□□□□ -0.3
VPS52-220ENST00000493674 MYO18AQ92614 2054 aaKnown RBP13.17□□□□□ -0.3
VPS52-220ENST00000493674 hCG_1818297A0A087WSY0 165 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 CTAGE15A4D2H0 777 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 I6L893 689 aaPredicted RBP13.17□□□□□ -0.3
VPS52-220ENST00000493674 CTIFO43310 598 aaKnown RBP13.17□□□□□ -0.3
VPS52-220ENST00000493674 CLASP2O75122 1294 aaKnown RBP13.17□□□□□ -0.3
VPS52-220ENST00000493674 F9P00740 461 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 FGGP02679 453 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 POU2F2P09086 479 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 CTAGE8P0CG41 777 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 KDELR1P24390 212 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 ELF1P32519 619 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 GJC1P36383 396 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 PAFAH1B1P43034 410 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 SSR1P43307 286 aaKnown RBP13.17□□□□□ -0.3
VPS52-220ENST00000493674 EPHB3P54753 998 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 DEUP1Q05D60 604 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 SEMA3BQ13214 749 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 CYP1B1Q16678 543 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 SMTNL2Q2TAL5 461 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 KCNT1Q5JUK3 1230 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 ERMARDQ5T6L9 678 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 CCDC181Q5TID7 509 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 CCDC149Q6ZUS6 474 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 CTAGE6Q86UF2 777 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 CTAGE4Q8IX94 777 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 KREMEN2Q8NCW0 462 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 SLC7A14Q8TBB6 771 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 HDAC7Q8WUI4 952 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 CASP10Q92851 521 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 ACSF2Q96CM8 615 aaPredicted RBP13.17□□□□□ -0.3
VPS52-220ENST00000493674 FAF2Q96CS3 445 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 SLC39A13Q96H72 371 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 NAP1L3Q99457 506 aaPredicted RBP13.17□□□□□ -0.3
VPS52-220ENST00000493674 OSBPL8Q9BZF1 889 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 FAM204AQ9H8W3 233 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 ZWILCHQ9H900 591 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 SLC28A3Q9HAS3 691 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 IL21Q9HBE4 155 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 OLA1Q9NTK5 396 aaKnown RBP13.17□□□□□ -0.3
VPS52-220ENST00000493674 KLHL11Q9NVR0 708 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 FZD10Q9ULW2 581 aa13.17□□□□□ -0.3
VPS52-220ENST00000493674 TCRBV7S2A1N4TA0A589 114 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 LRRD1A4D1F6 860 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 ZNF840PA6NDX5 716 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 EPOPA6NHQ4 379 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 EFCAB8A8MWE9 144 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 CCDC188H7C350 402 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 IGLV3-27P01718 113 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 C8AP07357 584 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 CD48P09326 243 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 RALAP11233 206 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 RARGP13631 454 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 IL4RP24394 825 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 KLRC2P26717 231 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 HOXA9P31269 272 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 L1CAMP32004 1257 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 PPP3CCP48454 512 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 TUBP50607 506 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 DPYSL3Q14195 570 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 PPP2R5DQ14738 602 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 VEPH1Q14D04 833 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 PDK2Q15119 407 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 CA9Q16790 459 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 TFDP3Q5H9I0 405 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 PPP2R2DQ66LE6 453 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 KLHDC10Q6PID8 442 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 DNAJB7Q7Z6W7 309 aaPredicted RBP13.16□□□□□ -0.3
VPS52-220ENST00000493674 TMEM150AQ86TG1 271 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 ITIH5Q86UX2 942 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 FAM131BQ86XD5 332 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 TMC8Q8IU68 726 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 MMGT1Q8N4V1 131 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 DEFB123Q8N688 67 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 C12orf50Q8NA57 414 aaPredicted RBP13.16□□□□□ -0.3
VPS52-220ENST00000493674 NOA1Q8NC60 698 aaKnown RBP13.16□□□□□ -0.3
VPS52-220ENST00000493674 ADAM32Q8TC27 787 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 SERPINB11Q96P15 392 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 PLEKHA4Q9H4M7 779 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 PCDH18Q9HCL0 1135 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 ANLNQ9NQW6 1124 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 RBM12Q9NTZ6 932 aaKnown RBP13.16□□□□□ -0.3
VPS52-220ENST00000493674 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.16□□□□□ -0.3
VPS52-220ENST00000493674 DDIT4Q9NX09 232 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 ARHGEF38Q9NXL2 777 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 UXTQ9UBK9 157 aaPredicted RBP13.16□□□□□ -0.3
VPS52-220ENST00000493674 AP4E1Q9UPM8 1137 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 NR2E1Q9Y466 385 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 REV3LO60673 3130 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 MYOFQ9NZM1 2061 aa13.16□□□□□ -0.3
VPS52-220ENST00000493674 PI4K2BG5E9Z4 385 aa13.15□□□□□ -0.3
VPS52-220ENST00000493674 LPXNO60711 386 aa13.15□□□□□ -0.3
VPS52-220ENST00000493674 ZMYND10O75800 440 aa13.15□□□□□ -0.3
VPS52-220ENST00000493674 F11P03951 625 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms