RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 SMOQ99835 787 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 TRIM62Q9BVG3 475 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 SSU72Q9NP77 194 aaKnown RBP11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 PNPLA8Q9NP80 782 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 NKIRAS1Q9NYS0 192 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 RABGEF1Q9UJ41 708 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 SMG5Q9UPR3 1016 aaKnown RBP11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 TCRBV7S3A2A0A539 114 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 MOXD2PA6NHM9 499 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 CASTOR2A6NHX0 329 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 RASA4BC9J798 803 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 PRPF4O43172 522 aaKnown RBP eCLIP11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 RASA4O43374 803 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 GSTA2P09210 222 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 AFF1P51825 1210 aaKnown RBP11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 ATXN1P54253 815 aaKnown RBP11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 MAPRE1Q15691 268 aaKnown RBP11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 BBS9Q3SYG4 887 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 MSS51Q4VC12 460 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 NCBP2-AS2Q69YL0 99 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 FAM171BQ6P995 826 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 PAXIP1Q6ZW49 1069 aaPredicted RBP11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 CACNA2D3Q8IZS8 1091 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 OLFM3Q96PB7 478 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 PRMT1Q99873 361 aaKnown RBP11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 ADAM2Q99965 735 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 FERMT1Q9BQL6 677 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 DHRS4Q9BTZ2 278 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 ULBP1Q9BZM6 244 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 RAB6BQ9NRW1 208 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 ETNK2Q9NVF9 386 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 SRRDQ9UH36 339 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 RAD54BQ9Y620 910 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 MYBPHLA2RUH7 354 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 DGKIO75912 1065 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 KIAA0754O94854 1291 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 TPSB2P20231 275 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 DEUP1Q05D60 604 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 TPSAB1Q15661 275 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 ZNF598Q86UK7 904 aaKnown RBP11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 FAM131BQ86XD5 332 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 ANKMY2Q8IV38 441 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 SRRM1Q8IYB3 904 aaKnown RBP11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 DYDC1Q8WWB3 177 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 TSEN34Q9BSV6 310 aaKnown RBP11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 RNF186Q9NXI6 227 aa11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 COL4A4P53420 1690 aaPredicted RBP11.19□□□□□ -0.62
PHACTR4-204ENST00000493669 M0QYT0 321 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 F9P00740 461 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 TYMPP19971 482 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 ACLYP53396 1101 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 GBE1Q04446 702 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 GAD2Q05329 585 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 INTS6LQ5JSJ4 861 aaKnown RBP11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 C6orf89Q6UWU4 347 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 C3orf62Q6ZUJ4 267 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 BEND5Q7L4P6 421 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 ECHDC2Q86YB7 292 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 VPS52Q8N1B4 723 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 ZMIZ2Q8NF64 920 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 RNF139Q8WU17 664 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 CKAP2Q8WWK9 683 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 SEC16BQ96JE7 1060 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 WDR83Q9BRX9 315 aaKnown RBP11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 KCNK9Q9NPC2 374 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 ARHGEF4Q9NR80 690 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 DTLQ9NZJ0 730 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 TBK1Q9UHD2 729 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 TEX264Q9Y6I9 313 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 FAM47DPA6NHR8 397 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 HHLA1C9JL84 531 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 POC1B-GALNT4F8VUJ3 575 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 CAPN9O14815 690 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 ELNP15502 786 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 GOT1P17174 413 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 HCAR3P49019 387 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 NDUFV1P49821 464 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 HEATR6Q6AI08 1181 aaKnown RBP11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 DCLRE1AQ6PJP8 1040 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 ADGRD1Q6QNK2 874 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 KCNT2Q6UVM3 1135 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 FAM43BQ6ZT52 329 aaPredicted RBP11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 TFB1MQ8WVM0 346 aaKnown RBP11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 CYTH2Q99418 400 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 RTP3Q9BQQ7 232 aa11.18□□□□□ -0.62
PHACTR4-204ENST00000493669 TDRD15B5MCY1 1934 aaKnown RBP11.17□□□□□ -0.62
PHACTR4-204ENST00000493669 MYO1CO00159 1063 aa11.17□□□□□ -0.62
PHACTR4-204ENST00000493669 B3GAT3O94766 335 aa11.17□□□□□ -0.62
PHACTR4-204ENST00000493669 STK10O94804 968 aaKnown RBP11.17□□□□□ -0.62
PHACTR4-204ENST00000493669 EOMESO95936 686 aa11.17□□□□□ -0.62
PHACTR4-204ENST00000493669 GNRH1P01148 92 aa11.17□□□□□ -0.62
PHACTR4-204ENST00000493669 LTFP02788 710 aa11.17□□□□□ -0.62
PHACTR4-204ENST00000493669 IGFBP6P24592 240 aaPredicted RBP11.17□□□□□ -0.62
PHACTR4-204ENST00000493669 FDFT1P37268 417 aa11.17□□□□□ -0.62
PHACTR4-204ENST00000493669 CDK16Q00536 496 aa11.17□□□□□ -0.62
PHACTR4-204ENST00000493669 SLC10A2Q12908 348 aaPredicted RBP11.17□□□□□ -0.62
PHACTR4-204ENST00000493669 PAFAH1B3Q15102 231 aaKnown RBP11.17□□□□□ -0.62
PHACTR4-204ENST00000493669 QPCTQ16769 361 aa11.17□□□□□ -0.62
PHACTR4-204ENST00000493669 PDZD4Q76G19 769 aaPredicted RBP11.17□□□□□ -0.62
PHACTR4-204ENST00000493669 THEM5Q8N1Q8 247 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms