RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 ARHGAP17Q68EM7 881 aa17.45■□□□□ 0.38
PTPRU-208ENST00000493601 TOGARAM2Q6ZUX3 1019 aa17.45■□□□□ 0.38
PTPRU-208ENST00000493601 RSRC2Q7L4I2 434 aaKnown RBP17.45■□□□□ 0.38
PTPRU-208ENST00000493601 IPO4Q8TEX9 1081 aaKnown RBP17.45■□□□□ 0.38
PTPRU-208ENST00000493601 STRIP2Q9ULQ0 834 aa17.45■□□□□ 0.38
PTPRU-208ENST00000493601 ATXN2Q99700 1313 aaKnown RBP17.45■□□□□ 0.38
PTPRU-208ENST00000493601 GOLGA6L4A6NEF3 574 aa17.44■□□□□ 0.38
PTPRU-208ENST00000493601 PRRT4C9JH25 899 aa17.44■□□□□ 0.38
PTPRU-208ENST00000493601 GFRA2O00451 464 aa17.44■□□□□ 0.38
PTPRU-208ENST00000493601 CDX4O14627 284 aaPredicted RBP17.44■□□□□ 0.38
PTPRU-208ENST00000493601 NDUFV2P19404 249 aa17.44■□□□□ 0.38
PTPRU-208ENST00000493601 CORO1AP31146 461 aaKnown RBP17.44■□□□□ 0.38
PTPRU-208ENST00000493601 PRCPP42785 496 aa17.44■□□□□ 0.38
PTPRU-208ENST00000493601 YWHAEP62258 255 aaKnown RBP17.44■□□□□ 0.38
PTPRU-208ENST00000493601 EFEMP1Q12805 493 aa17.44■□□□□ 0.38
PTPRU-208ENST00000493601 RAB41Q5JT25 222 aa17.44■□□□□ 0.38
PTPRU-208ENST00000493601 SH3PXD2AQ5TCZ1 1133 aa17.44■□□□□ 0.38
PTPRU-208ENST00000493601 ZNF658Q5TYW1 1059 aaPredicted RBP17.44■□□□□ 0.38
PTPRU-208ENST00000493601 PEAR1Q5VY43 1037 aaPredicted RBP17.44■□□□□ 0.38
PTPRU-208ENST00000493601 RABEPKQ7Z6M1 372 aa17.44■□□□□ 0.38
PTPRU-208ENST00000493601 PIGZQ86VD9 579 aa17.44■□□□□ 0.38
PTPRU-208ENST00000493601 FMR1NBQ8N0W7 255 aaPredicted RBP17.44■□□□□ 0.38
PTPRU-208ENST00000493601 ANKRD52Q8NB46 1076 aa17.44■□□□□ 0.38
PTPRU-208ENST00000493601 GSDMAQ96QA5 445 aa17.44■□□□□ 0.38
PTPRU-208ENST00000493601 ACOX2Q99424 681 aa17.44■□□□□ 0.38
PTPRU-208ENST00000493601 GTPBP4Q9BZE4 634 aaKnown RBP17.44■□□□□ 0.38
PTPRU-208ENST00000493601 PLK2Q9NYY3 685 aa17.44■□□□□ 0.38
PTPRU-208ENST00000493601 MARCH2Q9P0N8 246 aa17.44■□□□□ 0.38
PTPRU-208ENST00000493601 PILRBQ9UKJ0 227 aa17.44■□□□□ 0.38
PTPRU-208ENST00000493601 SLC27A6Q9Y2P4 619 aa17.44■□□□□ 0.38
PTPRU-208ENST00000493601 USP24Q9UPU5 2620 aa17.44■□□□□ 0.38
PTPRU-208ENST00000493601 PI4KAP42356 2102 aa17.44■□□□□ 0.38
PTPRU-208ENST00000493601 FRYQ5TBA9 3013 aa17.43■□□□□ 0.38
PTPRU-208ENST00000493601 SMC2O95347 1197 aa17.43■□□□□ 0.38
PTPRU-208ENST00000493601 PENKP01210 267 aaPredicted RBP17.43■□□□□ 0.38
PTPRU-208ENST00000493601 KLKB1P03952 638 aa17.43■□□□□ 0.38
PTPRU-208ENST00000493601 CISD3P0C7P0 127 aa17.43■□□□□ 0.38
PTPRU-208ENST00000493601 CSRP1P21291 193 aaKnown RBP17.43■□□□□ 0.38
PTPRU-208ENST00000493601 ITPKAP23677 461 aa17.43■□□□□ 0.38
PTPRU-208ENST00000493601 BCAT1P54687 386 aa17.43■□□□□ 0.38
PTPRU-208ENST00000493601 YWHAGP61981 247 aaKnown RBP eCLIP17.43■□□□□ 0.38
PTPRU-208ENST00000493601 FKBP3Q00688 224 aaKnown RBP17.43■□□□□ 0.38
PTPRU-208ENST00000493601 LRRC63Q05C16 580 aa17.43■□□□□ 0.38
PTPRU-208ENST00000493601 CBWD6Q4V339 395 aa17.43■□□□□ 0.38
PTPRU-208ENST00000493601 CBWD3Q5JTY5 395 aa17.43■□□□□ 0.38
PTPRU-208ENST00000493601 CBWD5Q5RIA9 395 aa17.43■□□□□ 0.38
PTPRU-208ENST00000493601 KIAA1211LQ6NV74 962 aa17.43■□□□□ 0.38
PTPRU-208ENST00000493601 SLC23A3Q6PIS1 610 aa17.43■□□□□ 0.38
PTPRU-208ENST00000493601 ZC3H3Q8IXZ2 948 aaKnown RBP17.43■□□□□ 0.38
PTPRU-208ENST00000493601 CEP76Q8TAP6 659 aa17.43■□□□□ 0.38
PTPRU-208ENST00000493601 TATDN2Q93075 761 aa17.43■□□□□ 0.38
PTPRU-208ENST00000493601 CD248Q9HCU0 757 aa17.43■□□□□ 0.38
PTPRU-208ENST00000493601 TMEM74BQ9NUR3 256 aa17.43■□□□□ 0.38
PTPRU-208ENST00000493601 CACNA2D2Q9NY47 1150 aa17.43■□□□□ 0.38
PTPRU-208ENST00000493601 FBXO10Q9UK96 956 aa17.43■□□□□ 0.38
PTPRU-208ENST00000493601 COQ4Q9Y3A0 265 aa17.43■□□□□ 0.38
PTPRU-208ENST00000493601 IGHV1OR15-9A0A0B4J2B8 117 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 NPC1O15118 1278 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 ZBED1O96006 694 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 CYBBP04839 570 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 CFIP05156 583 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 HMBSP08397 361 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 CEACAM1P13688 526 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 ENGP17813 658 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 MAPK8P45983 427 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 TKTL1P51854 596 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 ZNF252P-AS1Q0IIN9 211 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 CUL2Q13617 745 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 STARD3Q14849 445 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 E2F5Q15329 346 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 DUOXA1Q1HG43 343 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 GOLGA7BQ2TAP0 167 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 UAP1L1Q3KQV9 507 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 SGO2Q562F6 1265 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 FYB2Q5VWT5 728 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 PLD4Q96BZ4 506 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 OLA1Q9NTK5 396 aaKnown RBP17.42■□□□□ 0.38
PTPRU-208ENST00000493601 HESX1Q9UBX0 185 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 ARMCX3Q9UH62 379 aaPredicted RBP17.42■□□□□ 0.38
PTPRU-208ENST00000493601 HOOK1Q9UJC3 728 aaKnown RBP17.42■□□□□ 0.38
PTPRU-208ENST00000493601 CYP8B1Q9UNU6 501 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 RAD54BQ9Y620 910 aa17.42■□□□□ 0.38
PTPRU-208ENST00000493601 GIPC1O14908 333 aa17.41■□□□□ 0.38
PTPRU-208ENST00000493601 XPO1O14980 1071 aaKnown RBP17.41■□□□□ 0.38
PTPRU-208ENST00000493601 MFAP3P55082 362 aa17.41■□□□□ 0.38
PTPRU-208ENST00000493601 GFPT1Q06210 699 aaPredicted RBP17.41■□□□□ 0.38
PTPRU-208ENST00000493601 BST2Q10589 180 aaKnown RBP17.41■□□□□ 0.38
PTPRU-208ENST00000493601 PM20D1Q6GTS8 502 aa17.41■□□□□ 0.38
PTPRU-208ENST00000493601 ANKS1BQ7Z6G8 1248 aa17.41■□□□□ 0.38
PTPRU-208ENST00000493601 DENND1CQ8IV53 801 aa17.41■□□□□ 0.38
PTPRU-208ENST00000493601 CPXM2Q8N436 756 aa17.41■□□□□ 0.38
PTPRU-208ENST00000493601 UCMAQ8WVF2 138 aa17.41■□□□□ 0.38
PTPRU-208ENST00000493601 SMARCE1Q969G3 411 aa17.41■□□□□ 0.38
PTPRU-208ENST00000493601 MRGPRX1Q96LB2 322 aa17.41■□□□□ 0.38
PTPRU-208ENST00000493601 TSPAN16Q9UKR8 245 aa17.41■□□□□ 0.38
PTPRU-208ENST00000493601 AGO1Q9UL18 857 aaKnown RBP17.41■□□□□ 0.38
PTPRU-208ENST00000493601 SLC12A8A0AV02 714 aa17.4■□□□□ 0.38
PTPRU-208ENST00000493601 NDUFS2O75306 463 aa17.4■□□□□ 0.38
PTPRU-208ENST00000493601 KRT37O76014 449 aa17.4■□□□□ 0.38
PTPRU-208ENST00000493601 SERPINF2P08697 491 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms