RNA–Protein interactions for RNA: ENST00000492991.5

C9orf78-206, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-206ENST00000492991 MIB1Q86YT6 1006 aa17.12■□□□□ 0.33
C9orf78-206ENST00000492991 PGBD3Q8N328 593 aa17.12■□□□□ 0.33
C9orf78-206ENST00000492991 CPXM2Q8N436 756 aa17.12■□□□□ 0.33
C9orf78-206ENST00000492991 METTL14Q9HCE5 456 aaKnown RBP17.12■□□□□ 0.33
C9orf78-206ENST00000492991 TMEM9BQ9NQ34 198 aa17.12■□□□□ 0.33
C9orf78-206ENST00000492991 ARMCX3Q9UH62 379 aaPredicted RBP17.12■□□□□ 0.33
C9orf78-206ENST00000492991 NUDT5Q9UKK9 219 aa17.12■□□□□ 0.33
C9orf78-206ENST00000492991 STRIP2Q9ULQ0 834 aa17.12■□□□□ 0.33
C9orf78-206ENST00000492991 PLXND1Q9Y4D7 1925 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 GON4LQ3T8J9 2241 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 C4orf47A7E2U8 309 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 PRRT4C9JH25 899 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 CDX4O14627 284 aaPredicted RBP17.11■□□□□ 0.33
C9orf78-206ENST00000492991 XPO1O14980 1071 aaKnown RBP17.11■□□□□ 0.33
C9orf78-206ENST00000492991 MDM4O15151 490 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 AP5Z1O43299 807 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 ZBED1O96006 694 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 TBXAS1P24557 533 aaPredicted RBP17.11■□□□□ 0.33
C9orf78-206ENST00000492991 IRX4P78413 519 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 CUL2Q13617 745 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 BECN1Q14457 450 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 TCERG1LQ5VWI1 586 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 SLC23A3Q6PIS1 610 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 METTL3Q86U44 580 aaKnown RBP17.11■□□□□ 0.33
C9orf78-206ENST00000492991 CHPFQ8IZ52 775 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 SCML4Q8N228 414 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 CEP76Q8TAP6 659 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 IPO4Q8TEX9 1081 aaKnown RBP17.11■□□□□ 0.33
C9orf78-206ENST00000492991 PIGKQ92643 395 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 SMARCE1Q969G3 411 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 SLC35C1Q96A29 364 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 ARID3AQ99856 593 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 SLC2A11Q9BYW1 496 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 ZDHHC4Q9NPG8 344 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 OLA1Q9NTK5 396 aaKnown RBP17.11■□□□□ 0.33
C9orf78-206ENST00000492991 CACNA1BQ00975 2339 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 LAMA1P25391 3075 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 CHD8Q9HCK8 2581 aa17.11■□□□□ 0.33
C9orf78-206ENST00000492991 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.1■□□□□ 0.33
C9orf78-206ENST00000492991 VDRP11473 427 aa17.1■□□□□ 0.33
C9orf78-206ENST00000492991 CSRP1P21291 193 aaKnown RBP17.1■□□□□ 0.33
C9orf78-206ENST00000492991 BCAT1P54687 386 aa17.1■□□□□ 0.33
C9orf78-206ENST00000492991 YWHAGP61981 247 aaKnown RBP eCLIP17.1■□□□□ 0.33
C9orf78-206ENST00000492991 ENPP2Q13822 863 aa17.1■□□□□ 0.33
C9orf78-206ENST00000492991 SGO2Q562F6 1265 aa17.1■□□□□ 0.33
C9orf78-206ENST00000492991 FYB2Q5VWT5 728 aa17.1■□□□□ 0.33
C9orf78-206ENST00000492991 LYSMD4Q5XG99 296 aa17.1■□□□□ 0.33
C9orf78-206ENST00000492991 TOGARAM2Q6ZUX3 1019 aa17.1■□□□□ 0.33
C9orf78-206ENST00000492991 RABEPKQ7Z6M1 372 aa17.1■□□□□ 0.33
C9orf78-206ENST00000492991 FAM217AQ8IXS0 508 aa17.1■□□□□ 0.33
C9orf78-206ENST00000492991 TMEFF1Q8IYR6 380 aa17.1■□□□□ 0.33
C9orf78-206ENST00000492991 KCTD13Q8WZ19 329 aa17.1■□□□□ 0.33
C9orf78-206ENST00000492991 DHTKD1Q96HY7 919 aaPredicted RBP17.1■□□□□ 0.33
C9orf78-206ENST00000492991 CEP63Q96MT8 703 aa17.1■□□□□ 0.33
C9orf78-206ENST00000492991 NUSAP1Q9BXS6 441 aaKnown RBP17.1■□□□□ 0.33
C9orf78-206ENST00000492991 MARCH2Q9P0N8 246 aa17.1■□□□□ 0.33
C9orf78-206ENST00000492991 HESX1Q9UBX0 185 aa17.1■□□□□ 0.33
C9orf78-206ENST00000492991 PILRBQ9UKJ0 227 aa17.1■□□□□ 0.33
C9orf78-206ENST00000492991 ANGPTL2Q9UKU9 493 aa17.1■□□□□ 0.33
C9orf78-206ENST00000492991 AGO1Q9UL18 857 aaKnown RBP17.1■□□□□ 0.33
C9orf78-206ENST00000492991 PSMA7O14818 248 aa17.09■□□□□ 0.33
C9orf78-206ENST00000492991 TIMM44O43615 452 aa17.09■□□□□ 0.33
C9orf78-206ENST00000492991 CORO1AP31146 461 aaKnown RBP17.09■□□□□ 0.33
C9orf78-206ENST00000492991 PTGER3P43115 390 aa17.09■□□□□ 0.33
C9orf78-206ENST00000492991 TKTL1P51854 596 aa17.09■□□□□ 0.33
C9orf78-206ENST00000492991 PMS1P54277 932 aaKnown RBP17.09■□□□□ 0.33
C9orf78-206ENST00000492991 ZNF445P59923 1031 aa17.09■□□□□ 0.33
C9orf78-206ENST00000492991 PDE4CQ08493 712 aa17.09■□□□□ 0.33
C9orf78-206ENST00000492991 BST2Q10589 180 aaKnown RBP17.09■□□□□ 0.33
C9orf78-206ENST00000492991 EFEMP1Q12805 493 aa17.09■□□□□ 0.33
C9orf78-206ENST00000492991 STIM1Q13586 685 aa17.09■□□□□ 0.33
C9orf78-206ENST00000492991 TRIP4Q15650 581 aaPredicted RBP17.09■□□□□ 0.33
C9orf78-206ENST00000492991 DCAF17Q5H9S7 520 aaPredicted RBP17.09■□□□□ 0.33
C9orf78-206ENST00000492991 UBR7Q8N806 425 aa17.09■□□□□ 0.33
C9orf78-206ENST00000492991 FRMD1Q8N878 549 aa17.09■□□□□ 0.33
C9orf78-206ENST00000492991 PLD4Q96BZ4 506 aa17.09■□□□□ 0.33
C9orf78-206ENST00000492991 ACOX2Q99424 681 aa17.09■□□□□ 0.33
C9orf78-206ENST00000492991 CALCOCO1Q9P1Z2 691 aa17.09■□□□□ 0.33
C9orf78-206ENST00000492991 RASAL2Q9UJF2 1139 aa17.09■□□□□ 0.33
C9orf78-206ENST00000492991 TSPAN16Q9UKR8 245 aa17.09■□□□□ 0.33
C9orf78-206ENST00000492991 HBS1LQ9Y450 684 aaKnown RBP17.09■□□□□ 0.33
C9orf78-206ENST00000492991 IGHV1OR15-9A0A0B4J2B8 117 aa17.08■□□□□ 0.32
C9orf78-206ENST00000492991 PATE3B3GLJ2 98 aa17.08■□□□□ 0.32
C9orf78-206ENST00000492991 P4HA2O15460 535 aa17.08■□□□□ 0.32
C9orf78-206ENST00000492991 CYBBP04839 570 aa17.08■□□□□ 0.32
C9orf78-206ENST00000492991 PAEPP09466 180 aa17.08■□□□□ 0.32
C9orf78-206ENST00000492991 SETSIPP0DME0 302 aa17.08■□□□□ 0.32
C9orf78-206ENST00000492991 CEACAM1P13688 526 aa17.08■□□□□ 0.32
C9orf78-206ENST00000492991 WASP42768 502 aa17.08■□□□□ 0.32
C9orf78-206ENST00000492991 MFAP3P55082 362 aa17.08■□□□□ 0.32
C9orf78-206ENST00000492991 RPL6Q02878 288 aaKnown RBP17.08■□□□□ 0.32
C9orf78-206ENST00000492991 EIF4HQ15056 248 aaKnown RBP17.08■□□□□ 0.32
C9orf78-206ENST00000492991 DUOXA1Q1HG43 343 aa17.08■□□□□ 0.32
C9orf78-206ENST00000492991 PKDCCQ504Y2 493 aa17.08■□□□□ 0.32
C9orf78-206ENST00000492991 TRIM61Q5EBN2 209 aa17.08■□□□□ 0.32
C9orf78-206ENST00000492991 RSRC2Q7L4I2 434 aaKnown RBP17.08■□□□□ 0.32
C9orf78-206ENST00000492991 BHLHA9Q7RTU4 235 aa17.08■□□□□ 0.32
C9orf78-206ENST00000492991 UCMAQ8WVF2 138 aa17.08■□□□□ 0.32
C9orf78-206ENST00000492991 PIWIL1Q96J94 861 aaKnown RBP17.08■□□□□ 0.32
C9orf78-206ENST00000492991 IRX2Q9BZI1 471 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms