RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 F8W810 466 aa14.58□□□□□ -0.08
PTPN7-216ENST00000492977 SYN3O14994 580 aa14.58□□□□□ -0.08
PTPN7-216ENST00000492977 PARNO95453 639 aaKnown RBP14.58□□□□□ -0.08
PTPN7-216ENST00000492977 NCAM1P13591 858 aa14.58□□□□□ -0.08
PTPN7-216ENST00000492977 NR1D1P20393 614 aa14.58□□□□□ -0.08
PTPN7-216ENST00000492977 CTCFP49711 727 aaPredicted RBP14.58□□□□□ -0.08
PTPN7-216ENST00000492977 CDR1P51861 262 aa14.58□□□□□ -0.08
PTPN7-216ENST00000492977 C4orf22Q6V702 233 aa14.58□□□□□ -0.08
PTPN7-216ENST00000492977 BEND5Q7L4P6 421 aa14.58□□□□□ -0.08
PTPN7-216ENST00000492977 BHLHA9Q7RTU4 235 aa14.58□□□□□ -0.08
PTPN7-216ENST00000492977 ZC3H18Q86VM9 953 aaKnown RBP14.58□□□□□ -0.08
PTPN7-216ENST00000492977 SPATA2LQ8IUW3 424 aaPredicted RBP14.58□□□□□ -0.08
PTPN7-216ENST00000492977 DCP1BQ8IZD4 617 aaKnown RBP14.58□□□□□ -0.08
PTPN7-216ENST00000492977 NTAN1Q96AB6 310 aa14.58□□□□□ -0.08
PTPN7-216ENST00000492977 RTP4Q96DX8 246 aa14.58□□□□□ -0.08
PTPN7-216ENST00000492977 TMEM209Q96SK2 561 aa14.58□□□□□ -0.08
PTPN7-216ENST00000492977 BEGAINQ9BUH8 593 aa14.58□□□□□ -0.08
PTPN7-216ENST00000492977 RHOBTB2Q9BYZ6 727 aa14.58□□□□□ -0.08
PTPN7-216ENST00000492977 C10orf88Q9H8K7 445 aa14.58□□□□□ -0.08
PTPN7-216ENST00000492977 USP29Q9HBJ7 922 aa14.58□□□□□ -0.08
PTPN7-216ENST00000492977 CWC15Q9P013 229 aaKnown RBP14.58□□□□□ -0.08
PTPN7-216ENST00000492977 HEY1Q9Y5J3 304 aa14.58□□□□□ -0.08
PTPN7-216ENST00000492977 USP3Q9Y6I4 520 aa14.58□□□□□ -0.08
PTPN7-216ENST00000492977 PTPRDP23468 1912 aa14.58□□□□□ -0.08
PTPN7-216ENST00000492977 RASGRF2O14827 1237 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 HOXA2O43364 376 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 SHOX2O60902 331 aaPredicted RBP14.57□□□□□ -0.08
PTPN7-216ENST00000492977 TADA2AO75478 443 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 CCL5P13501 91 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 ACTN2P35609 894 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 MAGEA4P43358 317 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 RABGGTBP53611 331 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 PITX1P78337 314 aaPredicted RBP14.57□□□□□ -0.08
PTPN7-216ENST00000492977 MTFR1Q15390 333 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 KYNUQ16719 465 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 EFHC2Q5JST6 749 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 BZW1Q7L1Q6 419 aaKnown RBP14.57□□□□□ -0.08
PTPN7-216ENST00000492977 SLC7A14Q8TBB6 771 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 PRCCQ92733 491 aaPredicted RBP14.57□□□□□ -0.08
PTPN7-216ENST00000492977 TLCD1Q96CP7 247 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 TTC25Q96NG3 672 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 CASD1Q96PB1 797 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 ZCWPW1Q9H0M4 648 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 RNF208Q9H0X6 261 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 STMN4Q9H169 189 aaPredicted RBP14.57□□□□□ -0.08
PTPN7-216ENST00000492977 PIGVQ9NUD9 493 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 NINJ2Q9NZG7 142 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 PAK5Q9P286 719 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 BCCIPQ9P287 314 aaKnown RBP eCLIP14.57□□□□□ -0.08
PTPN7-216ENST00000492977 DNAJB4Q9UDY4 337 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 LRFN2Q9ULH4 789 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 DNAH12Q6ZR08 3092 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 NLRC5Q86WI3 1866 aa14.57□□□□□ -0.08
PTPN7-216ENST00000492977 H3BRJ5 948 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 TCEA3O75764 348 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 ACSL3O95573 720 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 ABHD2P08910 425 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 CAPN2P17655 700 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 ADRA1BP35368 520 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 DMTNQ08495 405 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 SCAPQ12770 1279 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 NME3Q13232 169 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 MFSD5Q6N075 450 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 CENPUQ71F23 418 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 ZNF771Q7L3S4 317 aaPredicted RBP14.56□□□□□ -0.08
PTPN7-216ENST00000492977 ANKRD33Q7Z3H0 272 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 CDKL3Q8IVW4 592 aaPredicted RBP14.56□□□□□ -0.08
PTPN7-216ENST00000492977 NAT8LQ8N9F0 302 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 CPT1BQ92523 772 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 PWWP2AQ96N64 755 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 COLEC11Q9BWP8 271 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 CAPS2Q9BXY5 557 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 WDR6Q9NNW5 1121 aaKnown RBP14.56□□□□□ -0.08
PTPN7-216ENST00000492977 DNAJC17Q9NVM6 304 aaKnown RBP14.56□□□□□ -0.08
PTPN7-216ENST00000492977 FBXW11Q9UKB1 542 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 NOVA2Q9UNW9 492 aaKnown RBP14.56□□□□□ -0.08
PTPN7-216ENST00000492977 SYNJ2BP-COX16A0A087WUM0 186 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 TLDC2A0PJX2 215 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 ALOX15BO15296 676 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 EIF3HO15372 352 aaKnown RBP eCLIP14.56□□□□□ -0.08
PTPN7-216ENST00000492977 RGS16O15492 202 aaPredicted RBP14.56□□□□□ -0.08
PTPN7-216ENST00000492977 GALR2O43603 387 aaPredicted RBP14.56□□□□□ -0.08
PTPN7-216ENST00000492977 PQBP1O60828 265 aaKnown RBP14.56□□□□□ -0.08
PTPN7-216ENST00000492977 AGTP01019 485 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 CXCL10P02778 98 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 ALDH2P05091 517 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 GOT1P17174 413 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 ZNF135P52742 658 aaPredicted RBP14.56□□□□□ -0.08
PTPN7-216ENST00000492977 NFE2Q16621 373 aaPredicted RBP14.56□□□□□ -0.08
PTPN7-216ENST00000492977 ARL13BQ3SXY8 428 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 SLC45A4Q5BKX6 768 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 DNAJC21Q5F1R6 531 aaKnown RBP14.56□□□□□ -0.08
PTPN7-216ENST00000492977 UBAP2Q5T6F2 1119 aaKnown RBP14.56□□□□□ -0.08
PTPN7-216ENST00000492977 BSPRYQ5W0U4 402 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 CRIPAKQ8N1N5 446 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 PYROXD2Q8N2H3 581 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 UHMK1Q8TAS1 419 aaKnown RBP14.56□□□□□ -0.08
PTPN7-216ENST00000492977 RNF139Q8WU17 664 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 FUBP3Q96I24 572 aaKnown RBP eCLIP14.56□□□□□ -0.08
PTPN7-216ENST00000492977 SERPINB12Q96P63 405 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms