RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 GLIS1Q8NBF1 620 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 FAM76AQ8TAV0 307 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 ARL8AQ96BM9 186 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 PGAP3Q96FM1 320 aaPredicted RBP9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 CSPG4P5Q96PW8 444 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 EPB41L4BQ9H329 900 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 CDC42EP4Q9H3Q1 356 aaKnown RBP9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 TMBIM4Q9HC24 238 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 AAASQ9NRG9 546 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 PIGVQ9NUD9 493 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 MTMR10Q9NXD2 777 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 ABI2Q9NYB9 513 aaPredicted RBP9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 TBX21Q9UL17 535 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 TPX2Q9ULW0 747 aaKnown RBP9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 SHOC2Q9UQ13 582 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 ATP11BQ9Y2G3 1177 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 PCDHB5Q9Y5E4 795 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 NFS1Q9Y697 457 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 USP3Q9Y6I4 520 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 COL4A6Q14031 1691 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 PCNTO95613 3336 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 PTPRSQ13332 1948 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 SHROOM3Q8TF72 1996 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 DNAH12Q6ZR08 3092 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 HMGB1P1B2RPK0 211 aaPredicted RBP9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 H7C4K7 107 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 RIPK2O43353 540 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 ALDH2P05091 517 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 MYZAPP0CAP1 466 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 FGFR3P22607 806 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 RPL22P35268 128 aaKnown RBP9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 MAGEA11P43364 429 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 NR2C2P49116 596 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 GDF10P55107 478 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 SCAPQ12770 1279 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 XRCC4Q13426 336 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 MRPL58Q14197 206 aaKnown RBP9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 ARL13BQ3SXY8 428 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 KRT71Q3SY84 523 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 RNASEH2BQ5TBB1 312 aaKnown RBP9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 AGBL2Q5U5Z8 902 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 BSPRYQ5W0U4 402 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 VSTM1Q6UX27 236 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 CROCCP2Q86T23 111 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 TAC4Q86UU9 113 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 ZC3H18Q86VM9 953 aaKnown RBP9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 CEP57Q86XR8 500 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 SCN4BQ8IWT1 228 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 UNC45BQ8IWX7 931 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 CRIPAKQ8N1N5 446 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 FAM71DQ8N9W8 422 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 ANKLE1Q8NAG6 615 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 OR2W6PQ8NHA6 318 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 DIS3LQ8TF46 1054 aaKnown RBP9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 RNF139Q8WU17 664 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 C10orf88Q9H8K7 445 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 DDIT4Q9NX09 232 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 CWC15Q9P013 229 aaKnown RBP9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 HCSTQ9UBK5 93 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 HEY1Q9Y5J3 304 aa9.49□□□□□ -0.89
SMARCC1-208ENST00000492896 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 BCLAF3A2AJT9 711 aaKnown RBP9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 SMAPO00193 183 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 EEF2KO00418 725 aaKnown RBP9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 TNFRSF10BO14763 440 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 KCNN4O15554 427 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 GALTP07902 379 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 CLTBP09497 229 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 CPB1P15086 417 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 GOT1P17174 413 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 AMPD1P23109 780 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 STIP1P31948 543 aaKnown RBP9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 ADRA1BP35368 520 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 ACTN2P35609 894 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 CTCFP49711 727 aaPredicted RBP9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 ZNF135P52742 658 aaPredicted RBP9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 GYS2P54840 703 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 YWHAGP61981 247 aaKnown RBP eCLIP9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 GBE1Q04446 702 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 IFRD2Q12894 506 aaPredicted RBP9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 IKBKEQ14164 716 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 SLC45A4Q5BKX6 768 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 BTBD8Q5XKL5 378 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 NCBP2-AS2Q69YL0 99 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 BZW1Q7L1Q6 419 aaKnown RBP9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 RELL1Q8IUW5 271 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 PPIL6Q8IXY8 311 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 PYROXD2Q8N2H3 581 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 ADAM32Q8TC27 787 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 DQX1Q8TE96 717 aaKnown RBP9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 EDEM1Q92611 657 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 PRCCQ92733 491 aaPredicted RBP9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 EXOC4Q96A65 974 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 ARMC5Q96C12 935 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 RTP4Q96DX8 246 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 ATP6V1G3Q96LB4 118 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 C8orf48Q96LL4 319 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 QKIQ96PU8 341 aaKnown RBP eCLIP9.48□□□□□ -0.895e-7■■■□□ 14.6
SMARCC1-208ENST00000492896 OXCT2Q9BYC2 517 aaPredicted RBP9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 GPR62Q9BZJ7 368 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms