RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 ARHGAP18Q8N392 663 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 IL17RCQ8NAC3 791 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 TXNDC5Q8NBS9 432 aaKnown RBP12.35□□□□□ -0.43
MDC1-207ENST00000492462 GPT2Q8TD30 523 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 ACDQ96AP0 544 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 IPO9Q96P70 1041 aaKnown RBP12.35□□□□□ -0.43
MDC1-207ENST00000492462 BBS2Q9BXC9 721 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 PLK2Q9NYY3 685 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 DEC1Q9P2X7 70 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 INVSQ9Y283 1065 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 TBC1D3BA6NDS4 549 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 DCLK1O15075 740 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 AXIN1O15169 862 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 ADAM23O75077 832 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 APBB3O95704 486 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 PON1P27169 355 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 CORO1AP31146 461 aaKnown RBP12.34□□□□□ -0.43
MDC1-207ENST00000492462 CNR2P34972 360 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 MTIF2P46199 727 aaKnown RBP12.34□□□□□ -0.43
MDC1-207ENST00000492462 MRPS21P82921 87 aaKnown RBP12.34□□□□□ -0.43
MDC1-207ENST00000492462 GOLGA8FQ08AF8 430 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 GOLGA8DPQ0D2H9 430 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 ARHGAP44Q17R89 818 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 LAIR1Q6GTX8 287 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 GRAMD4Q6IC98 578 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 CEP68Q76N32 757 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 TADA2BQ86TJ2 420 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 KBTBD6Q86V97 674 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 DENND1CQ8IV53 801 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 FMNL3Q8IVF7 1028 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 SIX6OS1Q8N1H7 587 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 CAMKK1Q8N5S9 505 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 FAM160A2Q8N612 972 aaPredicted RBP12.34□□□□□ -0.43
MDC1-207ENST00000492462 TERB1Q8NA31 727 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 TSTD1Q8NFU3 115 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 GAB3Q8WWW8 586 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 CDK5RAP1Q96SZ6 601 aaKnown RBP12.34□□□□□ -0.43
MDC1-207ENST00000492462 SIX2Q9NPC8 291 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 DNAJC17Q9NVM6 304 aaKnown RBP12.34□□□□□ -0.43
MDC1-207ENST00000492462 MARK1Q9P0L2 795 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 SFMBT1Q9UHJ3 866 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 AGO1Q9UL18 857 aaKnown RBP12.34□□□□□ -0.43
MDC1-207ENST00000492462 MMP17Q9ULZ9 603 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 MAST4O15021 2626 aa12.34□□□□□ -0.43
MDC1-207ENST00000492462 GON4LQ3T8J9 2241 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 CCDC163A0A0D9SF12 145 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.33□□□□□ -0.44
MDC1-207ENST00000492462 PRRT4C9JH25 899 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 MSI1O43347 362 aaKnown RBP12.33□□□□□ -0.44
MDC1-207ENST00000492462 CACNG3O60359 315 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 RPP40O75818 363 aaKnown RBP12.33□□□□□ -0.44
MDC1-207ENST00000492462 LETM1O95202 739 aaPredicted RBP12.33□□□□□ -0.44
MDC1-207ENST00000492462 CISD3P0C7P0 127 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 WASP42768 502 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 GPD2P43304 727 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 TNFRSF4P43489 277 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 COG7P83436 770 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 SPEM2Q0P670 501 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 CRY1Q16526 586 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 TPD52L1Q16890 204 aaPredicted RBP12.33□□□□□ -0.44
MDC1-207ENST00000492462 EXOC3L4Q17RC7 722 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 MIIPQ5JXC2 388 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 C10orf76Q5T2E6 689 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 ANO7Q6IWH7 933 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 DPY19L2P1Q6NXN4 242 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 GBP6Q6ZN66 633 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 ERLEC1Q96DZ1 483 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 ACOX2Q99424 681 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 TPSD1Q9BZJ3 242 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 MIS12Q9H081 205 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 THAP9Q9H5L6 903 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 CNGB3Q9NQW8 809 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 SAMSN1Q9NSI8 373 aaKnown RBP12.33□□□□□ -0.44
MDC1-207ENST00000492462 APEX2Q9UBZ4 518 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 CYTH4Q9UIA0 394 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 GMEB2Q9UKD1 530 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 RAB23Q9ULC3 237 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 STRIP2Q9ULQ0 834 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 CLEC4EQ9ULY5 219 aa12.33□□□□□ -0.44
MDC1-207ENST00000492462 UNC79Q9P2D8 2635 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 THAP12O43422 761 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 FYNP06241 537 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 PNMA6AP0CW24 399 aaPredicted RBP12.32□□□□□ -0.44
MDC1-207ENST00000492462 ERCC5P28715 1186 aaPredicted RBP12.32□□□□□ -0.44
MDC1-207ENST00000492462 USP8P40818 1118 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 DGKEP52429 567 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 STILQ15468 1287 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 TRIP4Q15650 581 aaPredicted RBP12.32□□□□□ -0.44
MDC1-207ENST00000492462 CCDC6Q16204 474 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 MAN2A1Q16706 1144 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 FYB2Q5VWT5 728 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 EGFLAMQ63HQ2 1017 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.32□□□□□ -0.44
MDC1-207ENST00000492462 RASSF3Q86WH2 238 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 SCUBE3Q8IX30 993 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 SCML4Q8N228 414 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 MDGA1Q8NFP4 955 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 CCDC26Q8TAB7 109 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 RNF139Q8WU17 664 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 ZNF606Q8WXB4 792 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms