RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 HHIPQ96QV1 700 aa15.77■□□□□ 0.12
CDC42SE1-205ENST00000491825 TRPM5Q9NZQ8 1165 aa15.77■□□□□ 0.12
CDC42SE1-205ENST00000491825 NOCTQ9UK39 431 aaKnown RBP15.77■□□□□ 0.12
CDC42SE1-205ENST00000491825 SLC8A2Q9UPR5 921 aa15.77■□□□□ 0.12
CDC42SE1-205ENST00000491825 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.77■□□□□ 0.12
CDC42SE1-205ENST00000491825 SPTBN2O15020 2390 aa15.77■□□□□ 0.11
CDC42SE1-205ENST00000491825 LEFTY2O00292 366 aa15.76■□□□□ 0.11
CDC42SE1-205ENST00000491825 GDF9O60383 454 aa15.76■□□□□ 0.11
CDC42SE1-205ENST00000491825 GFPT2O94808 682 aa15.76■□□□□ 0.11
CDC42SE1-205ENST00000491825 EPN2O95208 641 aa15.76■□□□□ 0.11
CDC42SE1-205ENST00000491825 CALCAP01258 141 aa15.76■□□□□ 0.11
CDC42SE1-205ENST00000491825 GYPCP04921 128 aa15.76■□□□□ 0.11
CDC42SE1-205ENST00000491825 CCDC172P0C7W6 258 aa15.76■□□□□ 0.11
CDC42SE1-205ENST00000491825 PPP3CCP48454 512 aa15.76■□□□□ 0.11
CDC42SE1-205ENST00000491825 PIGZQ86VD9 579 aa15.76■□□□□ 0.11
CDC42SE1-205ENST00000491825 STK32AQ8WU08 396 aa15.76■□□□□ 0.11
CDC42SE1-205ENST00000491825 SLC35F5Q8WV83 523 aa15.76■□□□□ 0.11
CDC42SE1-205ENST00000491825 KCTD13Q8WZ19 329 aa15.76■□□□□ 0.11
CDC42SE1-205ENST00000491825 TRIM5Q9C035 493 aa15.76■□□□□ 0.11
CDC42SE1-205ENST00000491825 RNF38Q9H0F5 515 aa15.76■□□□□ 0.11
CDC42SE1-205ENST00000491825 NUCKS1Q9H1E3 243 aaKnown RBP15.76■□□□□ 0.11
CDC42SE1-205ENST00000491825 LHX5Q9H2C1 402 aa15.76■□□□□ 0.11
CDC42SE1-205ENST00000491825 FBXO44Q9H4M3 255 aa15.76■□□□□ 0.11
CDC42SE1-205ENST00000491825 CAPN11Q9UMQ6 739 aa15.76■□□□□ 0.11
CDC42SE1-205ENST00000491825 USP3Q9Y6I4 520 aa15.76■□□□□ 0.11
CDC42SE1-205ENST00000491825 LRRC53A6NM62 1247 aa15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 FOXD2O60548 495 aaPredicted RBP15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 NFATC1O95644 943 aa15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 LSM8O95777 96 aaKnown RBP15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 CYP17A1P05093 508 aa15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 CHRM1P11229 460 aaPredicted RBP15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 FERP16591 822 aa15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 YWHAQP27348 245 aa15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 CDH5P33151 784 aaPredicted RBP15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 GPD2P43304 727 aa15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 RPL34P49207 117 aaKnown RBP15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 KIF11P52732 1056 aa15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 TAF10Q12962 218 aa15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 GPRIN1Q7Z2K8 1008 aa15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 CCDC186Q7Z3E2 898 aa15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 NOP9Q86U38 636 aaKnown RBP15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 PDZD8Q8NEN9 1154 aa15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 UBA3Q8TBC4 463 aa15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 SYN2Q92777 582 aaPredicted RBP15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 EXOC4Q96A65 974 aa15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 ACDQ96AP0 544 aa15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 MRFAP1L1Q96HT8 127 aa15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 ZC3H10Q96K80 434 aaKnown RBP15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 HSFY1Q96LI6 401 aa15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 SLITRK1Q96PX8 696 aa15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 ARRDC1-AS1Q9H2J1 176 aa15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 CYLDQ9NQC7 956 aa15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 AIPL1Q9NZN9 384 aa15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 EBF1Q9UH73 591 aa15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 CPQQ9Y646 472 aa15.75■□□□□ 0.11
CDC42SE1-205ENST00000491825 ANAPC1Q9H1A4 1944 aa15.74■□□□□ 0.11
CDC42SE1-205ENST00000491825 ANTXRLA6NF34 631 aa15.74■□□□□ 0.11
CDC42SE1-205ENST00000491825 TULP2O00295 520 aa15.74■□□□□ 0.11
CDC42SE1-205ENST00000491825 AXIN1O15169 862 aa15.74■□□□□ 0.11
CDC42SE1-205ENST00000491825 KRT9P35527 623 aa15.74■□□□□ 0.11
CDC42SE1-205ENST00000491825 ZBED6P86452 979 aa15.74■□□□□ 0.11
CDC42SE1-205ENST00000491825 CDR2Q01850 454 aa15.74■□□□□ 0.11
CDC42SE1-205ENST00000491825 NR1H3Q13133 447 aa15.74■□□□□ 0.11
CDC42SE1-205ENST00000491825 DMC1Q14565 340 aa15.74■□□□□ 0.11
CDC42SE1-205ENST00000491825 PLK5Q496M5 336 aa15.74■□□□□ 0.11
CDC42SE1-205ENST00000491825 PLA2G2CQ5R387 149 aa15.74■□□□□ 0.11
CDC42SE1-205ENST00000491825 SNX30Q5VWJ9 437 aa15.74■□□□□ 0.11
CDC42SE1-205ENST00000491825 DENND1BQ6P3S1 775 aa15.74■□□□□ 0.11
CDC42SE1-205ENST00000491825 SCML4Q8N228 414 aa15.74■□□□□ 0.11
CDC42SE1-205ENST00000491825 ZNF397Q8NF99 534 aaPredicted RBP15.74■□□□□ 0.11
CDC42SE1-205ENST00000491825 SCAMP5Q8TAC9 235 aa15.74■□□□□ 0.11
CDC42SE1-205ENST00000491825 USP33Q8TEY7 942 aa15.74■□□□□ 0.11
CDC42SE1-205ENST00000491825 ZFRQ96KR1 1074 aaKnown RBP15.74■□□□□ 0.11
CDC42SE1-205ENST00000491825 RXFP3Q9NSD7 469 aa15.74■□□□□ 0.11
CDC42SE1-205ENST00000491825 SCML2Q9UQR0 700 aa15.74■□□□□ 0.11
CDC42SE1-205ENST00000491825 CEP83Q9Y592 693 aa15.74■□□□□ 0.11
CDC42SE1-205ENST00000491825 K7EQS6 105 aa15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 APBB3O95704 486 aa15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 ADRB1P08588 477 aa15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 ZDHHC11BP0C7U3 371 aa15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 ZNF806P0C7X5 589 aa15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 PRKCIP41743 596 aa15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 TUBP50607 506 aa15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 ZNF75DP51815 510 aa15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 LIMK1P53667 647 aa15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 MESP2Q0VG99 397 aa15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 PDCLQ13371 301 aa15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 ARID5BQ14865 1188 aa15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 SF3A2Q15428 464 aaKnown RBP15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 CCDC6Q16204 474 aa15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 PM20D1Q6GTS8 502 aa15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 PMF1Q6P1K2 205 aa15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 IRF2BP2Q7Z5L9 587 aa15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 ADGRG2Q8IZP9 1017 aa15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 FBXO32Q969P5 355 aa15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 SMPD4Q9NXE4 827 aa15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 LUC7L2Q9Y383 392 aaKnown RBP15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 PCDHGA5Q9Y5G8 931 aa15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 ZFHX4Q86UP3 3567 aa15.73■□□□□ 0.11
CDC42SE1-205ENST00000491825 SCAMP3O14828 347 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms