RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 MED15Q96RN5 788 aa18.87■□□□□ 0.61
HMGN1-219ENST00000491183 PLK2Q9NYY3 685 aa18.87■□□□□ 0.61
HMGN1-219ENST00000491183 MARCH2Q9P0N8 246 aa18.87■□□□□ 0.61
HMGN1-219ENST00000491183 FBXO10Q9UK96 956 aa18.87■□□□□ 0.61
HMGN1-219ENST00000491183 AGO1Q9UL18 857 aaKnown RBP18.87■□□□□ 0.61
HMGN1-219ENST00000491183 PCDHGA5Q9Y5G8 931 aa18.87■□□□□ 0.61
HMGN1-219ENST00000491183 CACNA1AO00555 2505 aa18.87■□□□□ 0.61
HMGN1-219ENST00000491183 THADAQ6YHU6 1953 aa18.86■□□□□ 0.61
HMGN1-219ENST00000491183 SLC12A8A0AV02 714 aa18.86■□□□□ 0.61
HMGN1-219ENST00000491183 ALDH1A2O94788 518 aa18.86■□□□□ 0.61
HMGN1-219ENST00000491183 RHOBTB1O94844 696 aa18.86■□□□□ 0.61
HMGN1-219ENST00000491183 GNA14O95837 355 aa18.86■□□□□ 0.61
HMGN1-219ENST00000491183 SETSIPP0DME0 302 aa18.86■□□□□ 0.61
HMGN1-219ENST00000491183 BCKDHBP21953 392 aa18.86■□□□□ 0.61
HMGN1-219ENST00000491183 CORO1AP31146 461 aaKnown RBP18.86■□□□□ 0.61
HMGN1-219ENST00000491183 WASP42768 502 aa18.86■□□□□ 0.61
HMGN1-219ENST00000491183 ADIGQ0VDE8 80 aa18.86■□□□□ 0.61
HMGN1-219ENST00000491183 CETN1Q12798 172 aa18.86■□□□□ 0.61
HMGN1-219ENST00000491183 CNGA2Q16280 664 aa18.86■□□□□ 0.61
HMGN1-219ENST00000491183 EGFLAMQ63HQ2 1017 aa18.86■□□□□ 0.61
HMGN1-219ENST00000491183 NUDT18Q6ZVK8 323 aa18.86■□□□□ 0.61
HMGN1-219ENST00000491183 RSRC2Q7L4I2 434 aaKnown RBP18.86■□□□□ 0.61
HMGN1-219ENST00000491183 NETO1Q8TDF5 533 aa18.86■□□□□ 0.61
HMGN1-219ENST00000491183 KREMEN1Q96MU8 473 aa18.86■□□□□ 0.61
HMGN1-219ENST00000491183 ACOX2Q99424 681 aa18.86■□□□□ 0.61
HMGN1-219ENST00000491183 RTKNQ9BST9 563 aa18.86■□□□□ 0.61
HMGN1-219ENST00000491183 DCLK3Q9C098 648 aa18.86■□□□□ 0.61
HMGN1-219ENST00000491183 SMOC1Q9H4F8 434 aa18.86■□□□□ 0.61
HMGN1-219ENST00000491183 POLMQ9NP87 494 aaPredicted RBP18.86■□□□□ 0.61
HMGN1-219ENST00000491183 RXFP3Q9NSD7 469 aa18.86■□□□□ 0.61
HMGN1-219ENST00000491183 CHMP5Q9NZZ3 219 aa18.86■□□□□ 0.61
HMGN1-219ENST00000491183 ZNF510Q9Y2H8 683 aa18.86■□□□□ 0.61
HMGN1-219ENST00000491183 DCDC2BA2VCK2 349 aa18.85■□□□□ 0.61
HMGN1-219ENST00000491183 YJEFN3A6XGL0 299 aa18.85■□□□□ 0.61
HMGN1-219ENST00000491183 E7ENQ6 273 aa18.85■□□□□ 0.61
HMGN1-219ENST00000491183 SLC30A4O14863 429 aa18.85■□□□□ 0.61
HMGN1-219ENST00000491183 AFPP02771 609 aaKnown RBP18.85■□□□□ 0.61
HMGN1-219ENST00000491183 BRD2P25440 801 aaKnown RBP18.85■□□□□ 0.61
HMGN1-219ENST00000491183 GBP1P32455 592 aa18.85■□□□□ 0.61
HMGN1-219ENST00000491183 MPLP40238 635 aa18.85■□□□□ 0.61
HMGN1-219ENST00000491183 ZNF132P52740 706 aa18.85■□□□□ 0.61
HMGN1-219ENST00000491183 GCNT1Q02742 428 aa18.85■□□□□ 0.61
HMGN1-219ENST00000491183 ELF2Q15723 593 aa18.85■□□□□ 0.61
HMGN1-219ENST00000491183 FYB2Q5VWT5 728 aa18.85■□□□□ 0.61
HMGN1-219ENST00000491183 BSPRYQ5W0U4 402 aa18.85■□□□□ 0.61
HMGN1-219ENST00000491183 PMF1Q6P1K2 205 aa18.85■□□□□ 0.61
HMGN1-219ENST00000491183 DENND1CQ8IV53 801 aa18.85■□□□□ 0.61
HMGN1-219ENST00000491183 FRMD1Q8N878 549 aa18.85■□□□□ 0.61
HMGN1-219ENST00000491183 RBBP8NLQ8NC74 664 aaPredicted RBP18.85■□□□□ 0.61
HMGN1-219ENST00000491183 RLN3Q8WXF3 142 aa18.85■□□□□ 0.61
HMGN1-219ENST00000491183 EDEM1Q92611 657 aa18.85■□□□□ 0.61
HMGN1-219ENST00000491183 STRIP2Q9ULQ0 834 aa18.85■□□□□ 0.61
HMGN1-219ENST00000491183 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.85■□□□□ 0.61
HMGN1-219ENST00000491183 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.85■□□□□ 0.61
HMGN1-219ENST00000491183 A0A1W2PQF6 199 aa18.84■□□□□ 0.61
HMGN1-219ENST00000491183 TCRBV21S2A2A0A5A6 115 aa18.84■□□□□ 0.61
HMGN1-219ENST00000491183 PIK3R2O00459 728 aa18.84■□□□□ 0.61
HMGN1-219ENST00000491183 FOXD2O60548 495 aaPredicted RBP18.84■□□□□ 0.61
HMGN1-219ENST00000491183 PENKP01210 267 aaPredicted RBP18.84■□□□□ 0.61
HMGN1-219ENST00000491183 LCP1P13796 627 aa18.84■□□□□ 0.61
HMGN1-219ENST00000491183 NTSR1P30989 418 aa18.84■□□□□ 0.61
HMGN1-219ENST00000491183 CHKAP35790 457 aa18.84■□□□□ 0.61
HMGN1-219ENST00000491183 P2RY2P41231 377 aa18.84■□□□□ 0.61
HMGN1-219ENST00000491183 DGKGP49619 791 aa18.84■□□□□ 0.61
HMGN1-219ENST00000491183 RGS7P49802 495 aa18.84■□□□□ 0.61
HMGN1-219ENST00000491183 DAOAP59103 153 aa18.84■□□□□ 0.61
HMGN1-219ENST00000491183 TRIP4Q15650 581 aaPredicted RBP18.84■□□□□ 0.61
HMGN1-219ENST00000491183 PMS2CLQ68D20 193 aa18.84■□□□□ 0.61
HMGN1-219ENST00000491183 TRMT11Q7Z4G4 463 aaKnown RBP18.84■□□□□ 0.61
HMGN1-219ENST00000491183 FMNL3Q8IVF7 1028 aa18.84■□□□□ 0.61
HMGN1-219ENST00000491183 SCML4Q8N228 414 aa18.84■□□□□ 0.61
HMGN1-219ENST00000491183 HMGB4Q8WW32 186 aa18.84■□□□□ 0.61
HMGN1-219ENST00000491183 IPO9Q96P70 1041 aaKnown RBP18.84■□□□□ 0.61
HMGN1-219ENST00000491183 INTS2Q9H0H0 1204 aaKnown RBP18.84■□□□□ 0.61
HMGN1-219ENST00000491183 CD248Q9HCU0 757 aa18.84■□□□□ 0.61
HMGN1-219ENST00000491183 CNGB3Q9NQW8 809 aa18.84■□□□□ 0.61
HMGN1-219ENST00000491183 SFMBT1Q9UHJ3 866 aa18.84■□□□□ 0.61
HMGN1-219ENST00000491183 RWDD2AQ9UIY3 292 aa18.84■□□□□ 0.61
HMGN1-219ENST00000491183 CNTN6Q9UQ52 1028 aa18.84■□□□□ 0.61
HMGN1-219ENST00000491183 NUP205Q92621 2012 aa18.84■□□□□ 0.61
HMGN1-219ENST00000491183 BCLAF3A2AJT9 711 aaKnown RBP18.83■□□□□ 0.6
HMGN1-219ENST00000491183 GABRG2P18507 467 aa18.83■□□□□ 0.6
HMGN1-219ENST00000491183 CREB5Q02930 508 aa18.83■□□□□ 0.6
HMGN1-219ENST00000491183 MAP7D1Q3KQU3 841 aa18.83■□□□□ 0.6
HMGN1-219ENST00000491183 C11orf74Q86VG3 221 aa18.83■□□□□ 0.6
HMGN1-219ENST00000491183 FAM217AQ8IXS0 508 aa18.83■□□□□ 0.6
HMGN1-219ENST00000491183 SIX6OS1Q8N1H7 587 aa18.83■□□□□ 0.6
HMGN1-219ENST00000491183 CPXM2Q8N436 756 aa18.83■□□□□ 0.6
HMGN1-219ENST00000491183 C12orf50Q8NA57 414 aaPredicted RBP18.83■□□□□ 0.6
HMGN1-219ENST00000491183 VPS45Q9NRW7 570 aa18.83■□□□□ 0.6
HMGN1-219ENST00000491183 ABCC13Q9NSE7 274 aa18.83■□□□□ 0.6
HMGN1-219ENST00000491183 OLA1Q9NTK5 396 aaKnown RBP18.83■□□□□ 0.6
HMGN1-219ENST00000491183 BCCIPQ9P287 314 aaKnown RBP eCLIP18.83■□□□□ 0.6
HMGN1-219ENST00000491183 CLEC4EQ9ULY5 219 aa18.83■□□□□ 0.6
HMGN1-219ENST00000491183 FGFR1OPO95684 399 aaKnown RBP18.82■□□□□ 0.6
HMGN1-219ENST00000491183 HOXB2P14652 356 aa18.82■□□□□ 0.6
HMGN1-219ENST00000491183 STILQ15468 1287 aa18.82■□□□□ 0.6
HMGN1-219ENST00000491183 AASDHQ4L235 1098 aaPredicted RBP18.82■□□□□ 0.6
HMGN1-219ENST00000491183 TCEAL6Q6IPX3 200 aa18.82■□□□□ 0.6
HMGN1-219ENST00000491183 IRF2BP1Q8IU81 584 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms