RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 CCDC117Q8IWD4 279 aaPredicted RBP4.53□□□□□ -1.68
CD46-216ENST00000490278 GALNT15Q8N3T1 639 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 OTUD7AQ8TE49 926 aaPredicted RBP4.53□□□□□ -1.68
CD46-216ENST00000490278 TRIM63Q969Q1 353 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 BBC3Q96PG8 261 aaPredicted RBP4.53□□□□□ -1.68
CD46-216ENST00000490278 ISCA1Q9BUE6 129 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 CPNE5Q9HCH3 593 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 IL17RBQ9NRM6 502 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 TFCP2L1Q9NZI6 479 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 NFU1Q9UMS0 254 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 GXYLT2A0PJZ3 443 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 ZNF213O14771 459 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 SUV39H1O43463 412 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 CER1O95813 267 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 HNRNPCP07910 306 aaKnown RBP eCLIP4.52□□□□□ -1.69
CD46-216ENST00000490278 TMIGD3P0DMS9 266 aaPredicted RBP4.52□□□□□ -1.69
CD46-216ENST00000490278 TGFB2P61812 414 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 CYP4F2P78329 520 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 POSTNQ15063 836 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 BTBD16Q32M84 506 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 TRIM60Q495X7 471 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 JMJD6Q6NYC1 403 aaPredicted RBP4.52□□□□□ -1.69
CD46-216ENST00000490278 LDHAL6AQ6ZMR3 332 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 KRT27Q7Z3Y8 459 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 FAM71DQ8N9W8 422 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 TERB1Q8NA31 727 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 TBC1D20Q96BZ9 403 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 SCLT1Q96NL6 688 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 MMS19Q96T76 1030 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 PAAF1Q9BRP4 392 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 CINPQ9BW66 212 aaPredicted RBP4.52□□□□□ -1.69
CD46-216ENST00000490278 CIPCQ9C0C6 399 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 IKZF4Q9H2S9 585 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 PABPC3Q9H361 631 aaKnown RBP4.52□□□□□ -1.69
CD46-216ENST00000490278 SAP30LQ9HAJ7 183 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 MLXIPQ9HAP2 919 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 PRDM8Q9NQV8 689 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 FBXO28Q9NVF7 368 aa4.52□□□□□ -1.69
CD46-216ENST00000490278 WDR33Q9C0J8 1336 aaKnown RBP4.51□□□□□ -1.69
CD46-216ENST00000490278 IPO5O00410 1097 aaKnown RBP4.51□□□□□ -1.69
CD46-216ENST00000490278 EXOC3O60645 756 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 RPP40O75818 363 aaKnown RBP4.51□□□□□ -1.69
CD46-216ENST00000490278 JTBO76095 146 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 SLPIP03973 132 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 DHRS4L1P0CG22 281 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 GPD1P21695 349 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 PPM1FP49593 454 aaPredicted RBP4.51□□□□□ -1.69
CD46-216ENST00000490278 COPB1P53618 953 aaKnown RBP4.51□□□□□ -1.69
CD46-216ENST00000490278 PNLIPRP1P54315 467 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 COL10A1Q03692 680 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 CCDC15Q0P6D6 951 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 TIGD6Q17RP2 521 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 TMEM63BQ5T3F8 832 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 RFX8Q6ZV50 586 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 RAB11FIP2Q7L804 512 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 BCDIN3DQ7Z5W3 292 aaKnown RBP4.51□□□□□ -1.69
CD46-216ENST00000490278 TRABD2AQ86V40 505 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 CERS3Q8IU89 383 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 C12orf76Q8N812 135 aaPredicted RBP4.51□□□□□ -1.69
CD46-216ENST00000490278 MYRIPQ8NFW9 859 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 SCAMP5Q8TAC9 235 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 SLC22A17Q8WUG5 538 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 RUBCNQ92622 972 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 CHFRQ96EP1 664 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 DAZAP1Q96EP5 407 aaKnown RBP4.51□□□□□ -1.69
CD46-216ENST00000490278 EDC3Q96F86 508 aaKnown RBP4.51□□□□□ -1.69
CD46-216ENST00000490278 PRR11Q96HE9 360 aaPredicted RBP4.51□□□□□ -1.69
CD46-216ENST00000490278 SNX18Q96RF0 628 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 MACROD1Q9BQ69 325 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 CHMP4AQ9BY43 222 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 KLK15Q9H2R5 256 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 SYNPO2LQ9H987 977 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 USP29Q9HBJ7 922 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 VPS45Q9NRW7 570 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 ASB6Q9NWX5 421 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 CNTN6Q9UQ52 1028 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 UBE2J1Q9Y385 318 aaPredicted RBP4.51□□□□□ -1.69
CD46-216ENST00000490278 INSL6Q9Y581 213 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 PCDHGB3Q9Y5G1 929 aa4.51□□□□□ -1.69
CD46-216ENST00000490278 FAM90A18PA6NE21 464 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 FAM90A16PA6NEW6 464 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 FAM90A9PA6NNJ1 464 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 EFCAB8A8MWE9 144 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 FAM90A5PA8MXJ8 464 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 PPP6R2O75170 966 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 FAM90A15PP0C7V4 464 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 FAM90A14PP0C7W9 464 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 ALADP13716 330 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 CST5P28325 142 aaPredicted RBP4.5□□□□□ -1.69
CD46-216ENST00000490278 IGHMBP2P38935 993 aaKnown RBP4.5□□□□□ -1.69
CD46-216ENST00000490278 RENBPP51606 427 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 GPC5P78333 572 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 HOXA4Q00056 320 aaPredicted RBP4.5□□□□□ -1.69
CD46-216ENST00000490278 CFHR3Q02985 330 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 RAPGEF1Q13905 1077 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 ZNF362Q5T0B9 420 aaPredicted RBP4.5□□□□□ -1.69
CD46-216ENST00000490278 NFRKBQ6P4R8 1299 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 TRIM72Q6ZMU5 477 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 AMIGO2Q86SJ2 522 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 LINC01465Q8N7H1 131 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms