RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 ERICH1Q86X53 443 aa8.21□□□□□ -1.1
SSR1-210ENST00000489567 DDX42Q86XP3 938 aaKnown RBP eCLIP8.21□□□□□ -1.1
SSR1-210ENST00000489567 XYLT1Q86Y38 959 aa8.21□□□□□ -1.1
SSR1-210ENST00000489567 VSTM4Q8IW00 320 aa8.21□□□□□ -1.1
SSR1-210ENST00000489567 ZNF687Q8N1G0 1237 aa8.21□□□□□ -1.1
SSR1-210ENST00000489567 FLCNQ8NFG4 579 aa8.21□□□□□ -1.1
SSR1-210ENST00000489567 CSGALNACT1Q8TDX6 532 aa8.21□□□□□ -1.1
SSR1-210ENST00000489567 DQX1Q8TE96 717 aaKnown RBP8.21□□□□□ -1.1
SSR1-210ENST00000489567 RNF139Q8WU17 664 aa8.21□□□□□ -1.1
SSR1-210ENST00000489567 CDK5RAP1Q96SZ6 601 aaKnown RBP8.21□□□□□ -1.1
SSR1-210ENST00000489567 NUP58Q9BVL2 599 aa8.21□□□□□ -1.1
SSR1-210ENST00000489567 C1QTNF1Q9BXJ1 281 aa8.21□□□□□ -1.1
SSR1-210ENST00000489567 SYNCQ9H7C4 482 aa8.21□□□□□ -1.1
SSR1-210ENST00000489567 ECT2Q9H8V3 914 aa8.21□□□□□ -1.1
SSR1-210ENST00000489567 TBC1D17Q9HA65 648 aa8.21□□□□□ -1.1
SSR1-210ENST00000489567 TAS2R14Q9NYV8 317 aa8.21□□□□□ -1.1
SSR1-210ENST00000489567 CALCOCO1Q9P1Z2 691 aa8.21□□□□□ -1.1
SSR1-210ENST00000489567 PRDM4Q9UKN5 801 aa8.21□□□□□ -1.1
SSR1-210ENST00000489567 SH3BP1Q9Y3L3 701 aa8.21□□□□□ -1.1
SSR1-210ENST00000489567 SPECC1L-ADORA2AF8WAN1 911 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 MAP3K13O43283 966 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 SART1O43290 800 aaKnown RBP8.2□□□□□ -1.1
SSR1-210ENST00000489567 CBFA2T2O43439 604 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 GJB6O95452 261 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 CYP17A1P05093 508 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 PLEKP08567 350 aaPredicted RBP8.2□□□□□ -1.1
SSR1-210ENST00000489567 TFE3P19532 575 aaPredicted RBP8.2□□□□□ -1.1
SSR1-210ENST00000489567 TARSP26639 723 aaKnown RBP8.2□□□□□ -1.1
SSR1-210ENST00000489567 PRKCIP41743 596 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 KPNA1P52294 538 aaPredicted RBP8.2□□□□□ -1.1
SSR1-210ENST00000489567 VCPP55072 806 aaKnown RBP8.2□□□□□ -1.1
SSR1-210ENST00000489567 COG7P83436 770 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 ZBED6P86452 979 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 SLC6A3Q01959 620 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 CENPCQ03188 943 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 PRKCQQ04759 706 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 PDGFRLQ15198 375 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 TRIP4Q15650 581 aaPredicted RBP8.2□□□□□ -1.1
SSR1-210ENST00000489567 DCAF6Q58WW2 860 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 SPECC1LQ69YQ0 1117 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 TRNP1Q6NT89 227 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 RHBDF2Q6PJF5 856 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 TRIM72Q6ZMU5 477 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 SLC26A9Q7LBE3 791 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 TADA2BQ86TJ2 420 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 TAC4Q86UU9 113 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 DEFB106AQ8N104 65 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 FBXL6Q8N531 539 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 TMEM105Q8N8V8 129 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 ATP2A3Q93084 1043 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 C18orf8Q96DM3 657 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 SLC2A13Q96QE2 648 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 C11orf70Q9BRQ4 267 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 MFSD1Q9H3U5 465 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 POPDC2Q9HBU9 364 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 FBRSL1Q9HCM7 1045 aaKnown RBP8.2□□□□□ -1.1
SSR1-210ENST00000489567 OLA1Q9NTK5 396 aaKnown RBP8.2□□□□□ -1.1
SSR1-210ENST00000489567 SEPT11Q9NVA2 429 aaKnown RBP8.2□□□□□ -1.1
SSR1-210ENST00000489567 WDFY4Q6ZS81 3184 aa8.2□□□□□ -1.1
SSR1-210ENST00000489567 KANSL1LA0AUZ9 987 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 GOLGA8SH3BPF8 625 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 DDX3XO00571 662 aaKnown RBP eCLIP8.19□□□□□ -1.15e-15■■□□□ 11.6
SSR1-210ENST00000489567 IGLV3-25P01717 112 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 IGLV3-27P01718 113 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 TPM3P06753 285 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 DCNP07585 359 aaKnown RBP8.19□□□□□ -1.1
SSR1-210ENST00000489567 GLULP15104 373 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 CORO1AP31146 461 aaKnown RBP8.19□□□□□ -1.1
SSR1-210ENST00000489567 GJA4P35212 333 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 RNASE9P60153 205 aaKnown RBP8.19□□□□□ -1.1
SSR1-210ENST00000489567 KLHL30Q0D2K2 578 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 MESP2Q0VG99 397 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 FZD5Q13467 585 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 EIF4EBP2Q13542 120 aaPredicted RBP8.19□□□□□ -1.1
SSR1-210ENST00000489567 DHCR24Q15392 516 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 EFHC1Q5JVL4 640 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 LY6G5CQ5SRR4 150 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 FAM102AQ5T9C2 384 aaPredicted RBP8.19□□□□□ -1.1
SSR1-210ENST00000489567 OTUD1Q5VV17 481 aaPredicted RBP8.19□□□□□ -1.1
SSR1-210ENST00000489567 MON1BQ7L1V2 547 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 BEND5Q7L4P6 421 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 C12orf40Q86WS4 652 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 TMEM25Q86YD3 366 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 DENND1CQ8IV53 801 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 KIAA1958Q8N8K9 716 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 ZNF397Q8NF99 534 aaPredicted RBP8.19□□□□□ -1.1
SSR1-210ENST00000489567 FAM3CQ92520 227 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 GOLGA1Q92805 767 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 TRIM5Q9C035 493 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 LTB4R2Q9NPC1 389 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 ASNSD1Q9NWL6 643 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 TMEM59LQ9UK28 342 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 AGO1Q9UL18 857 aaKnown RBP8.19□□□□□ -1.1
SSR1-210ENST00000489567 STRIP2Q9ULQ0 834 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 NDRG2Q9UN36 371 aaKnown RBP8.19□□□□□ -1.1
SSR1-210ENST00000489567 LUC7L2Q9Y383 392 aaKnown RBP8.19□□□□□ -1.1
SSR1-210ENST00000489567 HBS1LQ9Y450 684 aaKnown RBP8.19□□□□□ -1.1
SSR1-210ENST00000489567 ANTXRLA6NF34 631 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 TMCO5BA8MYB1 307 aa8.19□□□□□ -1.1
SSR1-210ENST00000489567 SLC9A3R1O14745 358 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms