RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 E2F5Q15329 346 aa25.08■■□□□ 1.61
PTPN18-213ENST00000489215 GRAMD4Q6IC98 578 aa25.08■■□□□ 1.61
PTPN18-213ENST00000489215 PKN3Q6P5Z2 889 aa25.08■■□□□ 1.61
PTPN18-213ENST00000489215 TMEM110Q86TL2 294 aa25.08■■□□□ 1.61
PTPN18-213ENST00000489215 C12orf40Q86WS4 652 aa25.08■■□□□ 1.61
PTPN18-213ENST00000489215 UNC45BQ8IWX7 931 aa25.08■■□□□ 1.61
PTPN18-213ENST00000489215 NAT16Q8N8M0 369 aa25.08■■□□□ 1.61
PTPN18-213ENST00000489215 SUMF1Q8NBK3 374 aa25.08■■□□□ 1.61
PTPN18-213ENST00000489215 EDEM1Q92611 657 aa25.08■■□□□ 1.61
PTPN18-213ENST00000489215 RUBCNQ92622 972 aa25.08■■□□□ 1.61
PTPN18-213ENST00000489215 LHX5Q9H2C1 402 aa25.08■■□□□ 1.61
PTPN18-213ENST00000489215 AGO1Q9UL18 857 aaKnown RBP25.08■■□□□ 1.61
PTPN18-213ENST00000489215 FOXN3O00409 490 aaPredicted RBP25.07■■□□□ 1.6
PTPN18-213ENST00000489215 CALCAP01258 141 aa25.07■■□□□ 1.6
PTPN18-213ENST00000489215 KLKB1P03952 638 aa25.07■■□□□ 1.6
PTPN18-213ENST00000489215 FNTBP49356 437 aa25.07■■□□□ 1.6
PTPN18-213ENST00000489215 C2orf27AQ580R0 203 aa25.07■■□□□ 1.6
PTPN18-213ENST00000489215 KLHDC7AQ5VTJ3 777 aa25.07■■□□□ 1.6
PTPN18-213ENST00000489215 DENND1BQ6P3S1 775 aa25.07■■□□□ 1.6
PTPN18-213ENST00000489215 DENND1CQ8IV53 801 aa25.07■■□□□ 1.6
PTPN18-213ENST00000489215 SCUBE3Q8IX30 993 aa25.07■■□□□ 1.6
PTPN18-213ENST00000489215 TERB1Q8NA31 727 aa25.07■■□□□ 1.6
PTPN18-213ENST00000489215 IRX2Q9BZI1 471 aaPredicted RBP25.07■■□□□ 1.6
PTPN18-213ENST00000489215 MIS12Q9H081 205 aa25.07■■□□□ 1.6
PTPN18-213ENST00000489215 PLCB1Q9NQ66 1216 aa25.07■■□□□ 1.6
PTPN18-213ENST00000489215 DNAJC17Q9NVM6 304 aaKnown RBP25.07■■□□□ 1.6
PTPN18-213ENST00000489215 FANCLQ9NW38 375 aa25.07■■□□□ 1.6
PTPN18-213ENST00000489215 MMP17Q9ULZ9 603 aa25.07■■□□□ 1.6
PTPN18-213ENST00000489215 KIAA1549LQ6ZVL6 1849 aa25.07■■□□□ 1.6
PTPN18-213ENST00000489215 PIK3R2O00459 728 aa25.06■■□□□ 1.6
PTPN18-213ENST00000489215 GABBR2O75899 941 aa25.06■■□□□ 1.6
PTPN18-213ENST00000489215 APBB3O95704 486 aa25.06■■□□□ 1.6
PTPN18-213ENST00000489215 SEC13P55735 322 aa25.06■■□□□ 1.6
PTPN18-213ENST00000489215 APBA1Q02410 837 aa25.06■■□□□ 1.6
PTPN18-213ENST00000489215 RING1Q06587 406 aa25.06■■□□□ 1.6
PTPN18-213ENST00000489215 KCNMA1Q12791 1236 aa25.06■■□□□ 1.6
PTPN18-213ENST00000489215 EOGTQ5NDL2 527 aa25.06■■□□□ 1.6
PTPN18-213ENST00000489215 NUGGCQ68CJ6 796 aa25.06■■□□□ 1.6
PTPN18-213ENST00000489215 FAM71AQ8IYT1 594 aa25.06■■□□□ 1.6
PTPN18-213ENST00000489215 PHTF2Q8N3S3 785 aa25.06■■□□□ 1.6
PTPN18-213ENST00000489215 GPR161Q8N6U8 529 aaKnown RBP25.06■■□□□ 1.6
PTPN18-213ENST00000489215 C2orf42Q9NWW7 574 aa25.06■■□□□ 1.6
PTPN18-213ENST00000489215 EBF1Q9UH73 591 aa25.06■■□□□ 1.6
PTPN18-213ENST00000489215 SFMBT1Q9UHJ3 866 aa25.06■■□□□ 1.6
PTPN18-213ENST00000489215 STARD13Q9Y3M8 1113 aa25.06■■□□□ 1.6
PTPN18-213ENST00000489215 CAPN9O14815 690 aa25.05■■□□□ 1.6
PTPN18-213ENST00000489215 NCAM1P13591 858 aa25.05■■□□□ 1.6
PTPN18-213ENST00000489215 UCHL3P15374 230 aa25.05■■□□□ 1.6
PTPN18-213ENST00000489215 CDK11BP21127 795 aaKnown RBP25.05■■□□□ 1.6
PTPN18-213ENST00000489215 DGKGP49619 791 aa25.05■■□□□ 1.6
PTPN18-213ENST00000489215 DGKEP52429 567 aa25.05■■□□□ 1.6
PTPN18-213ENST00000489215 KDSRQ06136 332 aa25.05■■□□□ 1.6
PTPN18-213ENST00000489215 RAPGEF1Q13905 1077 aa25.05■■□□□ 1.6
PTPN18-213ENST00000489215 KRT31Q15323 416 aa25.05■■□□□ 1.6
PTPN18-213ENST00000489215 HEATR6Q6AI08 1181 aaKnown RBP25.05■■□□□ 1.6
PTPN18-213ENST00000489215 FAM217AQ8IXS0 508 aa25.05■■□□□ 1.6
PTPN18-213ENST00000489215 FAM149B1Q96BN6 582 aa25.05■■□□□ 1.6
PTPN18-213ENST00000489215 HINFPQ9BQA5 517 aa25.05■■□□□ 1.6
PTPN18-213ENST00000489215 STK33Q9BYT3 514 aa25.05■■□□□ 1.6
PTPN18-213ENST00000489215 VPS16Q9H269 839 aa25.05■■□□□ 1.6
PTPN18-213ENST00000489215 TAB2Q9NYJ8 693 aa25.05■■□□□ 1.6
PTPN18-213ENST00000489215 SMG5Q9UPR3 1016 aaKnown RBP25.05■■□□□ 1.6
PTPN18-213ENST00000489215 ALDH1A2O94788 518 aa25.04■■□□□ 1.6
PTPN18-213ENST00000489215 GLI1P08151 1106 aa25.04■■□□□ 1.6
PTPN18-213ENST00000489215 PTMSP20962 102 aa25.04■■□□□ 1.6
PTPN18-213ENST00000489215 CLCN1P35523 988 aa25.04■■□□□ 1.6
PTPN18-213ENST00000489215 KIR2DL1P43626 348 aaPredicted RBP25.04■■□□□ 1.6
PTPN18-213ENST00000489215 NNTQ13423 1086 aa25.04■■□□□ 1.6
PTPN18-213ENST00000489215 SIM2Q14190 667 aaPredicted RBP25.04■■□□□ 1.6
PTPN18-213ENST00000489215 DRAP1Q14919 205 aaPredicted RBP25.04■■□□□ 1.6
PTPN18-213ENST00000489215 MPPE1Q53F39 396 aa25.04■■□□□ 1.6
PTPN18-213ENST00000489215 AZIN2Q96A70 460 aa25.04■■□□□ 1.6
PTPN18-213ENST00000489215 SERPINB11Q96P15 392 aa25.04■■□□□ 1.6
PTPN18-213ENST00000489215 SLC2A11Q9BYW1 496 aa25.04■■□□□ 1.6
PTPN18-213ENST00000489215 POPDC2Q9HBU9 364 aa25.04■■□□□ 1.6
PTPN18-213ENST00000489215 POLMQ9NP87 494 aaPredicted RBP25.04■■□□□ 1.6
PTPN18-213ENST00000489215 ACP6Q9NPH0 428 aa25.04■■□□□ 1.6
PTPN18-213ENST00000489215 NCDNQ9UBB6 729 aa25.04■■□□□ 1.6
PTPN18-213ENST00000489215 STOML2Q9UJZ1 356 aa25.04■■□□□ 1.6
PTPN18-213ENST00000489215 FBXO10Q9UK96 956 aa25.04■■□□□ 1.6
PTPN18-213ENST00000489215 PENKP01210 267 aaPredicted RBP25.03■■□□□ 1.6
PTPN18-213ENST00000489215 TIE1P35590 1138 aa25.03■■□□□ 1.6
PTPN18-213ENST00000489215 SLC11A2P49281 568 aa25.03■■□□□ 1.6
PTPN18-213ENST00000489215 YWHAZP63104 245 aaKnown RBP25.03■■□□□ 1.6
PTPN18-213ENST00000489215 PDCLQ13371 301 aa25.03■■□□□ 1.6
PTPN18-213ENST00000489215 CRY1Q16526 586 aa25.03■■□□□ 1.6
PTPN18-213ENST00000489215 EFHC1Q5JVL4 640 aa25.03■■□□□ 1.6
PTPN18-213ENST00000489215 C10orf76Q5T2E6 689 aa25.03■■□□□ 1.6
PTPN18-213ENST00000489215 ADGRF1Q5T601 910 aa25.03■■□□□ 1.6
PTPN18-213ENST00000489215 LAIR1Q6GTX8 287 aa25.03■■□□□ 1.6
PTPN18-213ENST00000489215 SDE2Q6IQ49 451 aa25.03■■□□□ 1.6
PTPN18-213ENST00000489215 DPY19L2P1Q6NXN4 242 aa25.03■■□□□ 1.6
PTPN18-213ENST00000489215 C11orf57Q6ZUT1 292 aaPredicted RBP25.03■■□□□ 1.6
PTPN18-213ENST00000489215 IL17RCQ8NAC3 791 aa25.03■■□□□ 1.6
PTPN18-213ENST00000489215 TSTD1Q8NFU3 115 aa25.03■■□□□ 1.6
PTPN18-213ENST00000489215 CLEC4CQ8WTT0 213 aa25.03■■□□□ 1.6
PTPN18-213ENST00000489215 PPP1R13BQ96KQ4 1090 aa25.03■■□□□ 1.6
PTPN18-213ENST00000489215 DDX50Q9BQ39 737 aaKnown RBP25.03■■□□□ 1.6
PTPN18-213ENST00000489215 LSM14BQ9BX40 385 aaKnown RBP25.03■■□□□ 1.6
PTPN18-213ENST00000489215 PDCL3Q9H2J4 239 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms