RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 RNF220Q5VTB9 566 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 IRGCQ6NXR0 463 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 LLGL2Q6P1M3 1020 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 GLB1LQ6UWU2 654 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 C4orf50Q6ZRC1 276 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 GSTA5Q7RTV2 222 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 MTDHQ86UE4 582 aaKnown RBP9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 PASD1Q8IV76 773 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 ZCCHC9Q8N567 271 aaKnown RBP9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 CCDC89Q8N998 374 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 GSTCDQ8NEC7 633 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 DDX1Q92499 740 aaKnown RBP9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 ZNF75CPQ92670 426 aaPredicted RBP9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 FAM136AQ96C01 138 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 LBHD1Q9BQE6 289 aaPredicted RBP9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 CADM1Q9BY67 442 aaKnown RBP9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 TLE6Q9H808 572 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 NPHS2Q9NP85 383 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 CYLDQ9NQC7 956 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 KIAA1257Q9ULG3 409 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 BARX2Q9UMQ3 279 aaPredicted RBP9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 SMG5Q9UPR3 1016 aaKnown RBP9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 NUMBLQ9Y6R0 609 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 A0A1W2PPM1 405 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 MED7O43513 233 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 CILPO75339 1184 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 POMCP01189 267 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 BRD2P25440 801 aaKnown RBP9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 AFF1P51825 1210 aaKnown RBP9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 CCL23P55773 120 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 ROR2Q01974 943 aaKnown RBP9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 ORC1Q13415 861 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 TUSC3Q13454 348 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 GPNMBQ14956 572 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 STILQ15468 1287 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 CCNG2Q16589 344 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 PPP1R15BQ5SWA1 713 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 LVRNQ6Q4G3 990 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 DSTYKQ6XUX3 929 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 UNC93AQ86WB7 457 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 TOP6BLQ8N6T0 577 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 DBF4BQ8NFT6 615 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 SPATA18Q8TC71 538 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 URGCPQ8TCY9 931 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 NRG4Q8WWG1 115 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 ZNF606Q8WXB4 792 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 LINC01599Q8WXQ3 324 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 SCLYQ96I15 445 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 PAWRQ96IZ0 340 aaKnown RBP9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 SDCBP2Q9H190 292 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 MIOSQ9NXC5 875 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 STOML1Q9UBI4 398 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 LNPEPQ9UIQ6 1025 aa9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 RPL26L1Q9UNX3 145 aaKnown RBP9.36□□□□□ -0.91
EXOSC1-211ENST00000489158 ARHGEF37A1IGU5 675 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 WDR91A4D1P6 747 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 CASTOR2A6NHX0 329 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 SIGLEC16A6NMB1 481 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 KPNA7A9QM74 516 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 C2CD2LO14523 706 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 KRT36O76013 467 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 LSM8O95777 96 aaKnown RBP9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 KLRC2P26717 231 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 GJC1P36383 396 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 KLF1Q13351 362 aaPredicted RBP9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 RCN2Q14257 317 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 FASTKD3Q14CZ7 662 aaKnown RBP9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 RCN1Q15293 331 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 CTC1Q2NKJ3 1217 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 C2CD6Q53TS8 623 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 SNX30Q5VWJ9 437 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 FYB2Q5VWT5 728 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 OR52E8Q6IFG1 317 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 LIMS2Q7Z4I7 341 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 RTN4RL1Q86UN2 441 aaPredicted RBP9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 TDRPQ86YL5 185 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 GALNT15Q8N3T1 639 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 GLIS1Q8NBF1 620 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 PHC3Q8NDX5 983 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 SCG3Q8WXD2 468 aaKnown RBP9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 TRIM11Q96F44 468 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 MAK16Q9BXY0 300 aaKnown RBP9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 ZNF518BQ9C0D4 1074 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 VCXQ9H320 206 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 VPS37BQ9H9H4 285 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 SAR1AQ9NR31 198 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 TMEM39AQ9NV64 488 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 ARL8BQ9NVJ2 186 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 CACNG4Q9UBN1 327 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 DCTN4Q9UJW0 460 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 PCDHGC3Q9UN70 934 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 SCN5AQ14524 2016 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 KIAA0100Q14667 2235 aaKnown RBP9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 MICAL3Q7RTP6 2002 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 ENPP3O14638 875 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 CYP1A1P04798 512 aaPredicted RBP9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 ZSCAN5DPP0CG00 497 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 NSFP46459 744 aaKnown RBP9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 NDST1P52848 882 aa9.35□□□□□ -0.91
EXOSC1-211ENST00000489158 SLC18A1P54219 525 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms