RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 CLEC4CQ8WTT0 213 aa18.89■□□□□ 0.62
POLR2J3-205ENST00000489144 NDRG1Q92597 394 aaKnown RBP18.89■□□□□ 0.62
POLR2J3-205ENST00000489144 GATA6Q92908 595 aa18.89■□□□□ 0.62
POLR2J3-205ENST00000489144 RNF25Q96BH1 459 aaPredicted RBP18.89■□□□□ 0.62
POLR2J3-205ENST00000489144 ZNF560Q96MR9 790 aa18.89■□□□□ 0.62
POLR2J3-205ENST00000489144 CCDC28BQ9BUN5 200 aa18.89■□□□□ 0.62
POLR2J3-205ENST00000489144 HCSTQ9UBK5 93 aa18.89■□□□□ 0.62
POLR2J3-205ENST00000489144 AMACRQ9UHK6 382 aa18.89■□□□□ 0.62
POLR2J3-205ENST00000489144 PROSCO94903 275 aa18.89■□□□□ 0.61
POLR2J3-205ENST00000489144 STAU1O95793 577 aaKnown RBP18.89■□□□□ 0.61
POLR2J3-205ENST00000489144 CALB1P05937 261 aa18.89■□□□□ 0.61
POLR2J3-205ENST00000489144 GATMP50440 423 aa18.89■□□□□ 0.61
POLR2J3-205ENST00000489144 SF3A3Q12874 501 aaKnown RBP eCLIP18.89■□□□□ 0.61
POLR2J3-205ENST00000489144 TCEAL1Q15170 157 aa18.89■□□□□ 0.61
POLR2J3-205ENST00000489144 CNGA2Q16280 664 aa18.89■□□□□ 0.61
POLR2J3-205ENST00000489144 SMTNL2Q2TAL5 461 aa18.89■□□□□ 0.61
POLR2J3-205ENST00000489144 SH3PXD2AQ5TCZ1 1133 aa18.89■□□□□ 0.61
POLR2J3-205ENST00000489144 KIAA0319Q5VV43 1072 aa18.89■□□□□ 0.61
POLR2J3-205ENST00000489144 KLC3Q6P597 504 aa18.89■□□□□ 0.61
POLR2J3-205ENST00000489144 XYLT1Q86Y38 959 aa18.89■□□□□ 0.61
POLR2J3-205ENST00000489144 MDM1Q8TC05 714 aa18.89■□□□□ 0.61
POLR2J3-205ENST00000489144 SLC2A14Q8TDB8 520 aa18.89■□□□□ 0.61
POLR2J3-205ENST00000489144 SNRNP27Q8WVK2 155 aaKnown RBP18.89■□□□□ 0.61
POLR2J3-205ENST00000489144 C18orf8Q96DM3 657 aa18.89■□□□□ 0.61
POLR2J3-205ENST00000489144 NSRP1Q9H0G5 558 aaKnown RBP18.89■□□□□ 0.61
POLR2J3-205ENST00000489144 CHST12Q9NRB3 414 aa18.89■□□□□ 0.61
POLR2J3-205ENST00000489144 A0A0U1RQF3 1178 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 TCRBV5S1A1TA0A578 114 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 CCL23P55773 120 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 HPCAP84074 193 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 TCTN1Q2MV58 587 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 FAM102AQ5T9C2 384 aaPredicted RBP18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 OR6B2Q6IFH4 312 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 SCUBE3Q8IX30 993 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 ACTRT1Q8TDG2 376 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 LRRC45Q96CN5 670 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 SENP8Q96LD8 212 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 UBAP1Q9NZ09 502 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 KIAA0100Q14667 2235 aaKnown RBP18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 TMEM191CA6NGB0 347 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 NVLO15381 856 aaKnown RBP18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 XPOTO43592 962 aaKnown RBP18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 GABBR2O75899 941 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 CDH5P33151 784 aaPredicted RBP18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 SV2CQ496J9 727 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 KCNT1Q5JUK3 1230 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 DIS3LQ8TF46 1054 aaKnown RBP18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 RHOBTB2Q9BYZ6 727 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 TRIM31Q9BZY9 425 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 MRPL47Q9HD33 250 aaKnown RBP18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 SAGE1Q9NXZ1 904 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 PCDHA3Q9Y5H8 950 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 USH1CQ9Y6N9 552 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 DCDC2CA8MYV0 355 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 B3GAT3O94766 335 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 CDO1Q16878 200 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 CFAP157Q5JU67 520 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 FAM183BPQ6ZVS7 135 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 DDX42Q86XP3 938 aaKnown RBP eCLIP18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 RASGEF1CQ8N431 466 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 HAUS1Q96CS2 278 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 ZNF180Q9UJW8 692 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 SCINQ9Y6U3 715 aa18.88■□□□□ 0.61
POLR2J3-205ENST00000489144 NBNO60934 754 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 KRT3P12035 628 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 CLCN2P51788 898 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 MTTPP55157 894 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 BCAR1P56945 870 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 ARHGEF6Q15052 776 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 UAP1Q16222 522 aaPredicted RBP18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 FAM182AQ5T1J6 154 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 LCLAT1Q6UWP7 414 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 DSTYKQ6XUX3 929 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 CTU1Q7Z7A3 348 aaKnown RBP18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 ECHDC2Q86YB7 292 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 ZNF280BQ86YH2 543 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 EIF1ADQ8N9N8 165 aaKnown RBP18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 NUDCD1Q96RS6 583 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 TSEN34Q9BSV6 310 aaKnown RBP18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 WNT8AQ9H1J5 351 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 LHX5Q9H2C1 402 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 SPO11Q9Y5K1 396 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 SIGLEC16A6NMB1 481 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 BEST1O76090 585 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 LCP1P13796 627 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 SKIV2L2P42285 1042 aaKnown RBP18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 NEK2P51955 445 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 GPNMBQ14956 572 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 TIGD5Q53EQ6 642 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 LRRC8DQ7L1W4 858 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 HACE1Q8IYU2 909 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 ATG4AQ8WYN0 398 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 VCPIP1Q96JH7 1222 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 TRIM51Q9BSJ1 452 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 PCSK1NQ9UHG2 260 aa18.87■□□□□ 0.61
POLR2J3-205ENST00000489144 BIRC5O15392 142 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 TTI1O43156 1089 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 SART1O43290 800 aaKnown RBP18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 SNX3O60493 162 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 SHBGP04278 402 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms