RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 PKDCCQ504Y2 493 aa24.11■■□□□ 1.45
COL9A3-213ENST00000489045 LCLAT1Q6UWP7 414 aa24.11■■□□□ 1.45
COL9A3-213ENST00000489045 TOGARAM2Q6ZUX3 1019 aa24.11■■□□□ 1.45
COL9A3-213ENST00000489045 TRMT11Q7Z4G4 463 aaKnown RBP24.11■■□□□ 1.45
COL9A3-213ENST00000489045 SIX6OS1Q8N1H7 587 aa24.11■■□□□ 1.45
COL9A3-213ENST00000489045 TRIML1Q8N9V2 468 aa24.11■■□□□ 1.45
COL9A3-213ENST00000489045 KCNV2Q8TDN2 545 aa24.11■■□□□ 1.45
COL9A3-213ENST00000489045 IPO9Q96P70 1041 aaKnown RBP24.11■■□□□ 1.45
COL9A3-213ENST00000489045 RTKNQ9BST9 563 aa24.11■■□□□ 1.45
COL9A3-213ENST00000489045 DCLK3Q9C098 648 aa24.11■■□□□ 1.45
COL9A3-213ENST00000489045 PLK2Q9NYY3 685 aa24.11■■□□□ 1.45
COL9A3-213ENST00000489045 PCDHGA5Q9Y5G8 931 aa24.11■■□□□ 1.45
COL9A3-213ENST00000489045 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.11■■□□□ 1.45
COL9A3-213ENST00000489045 TCRBV21S2A2A0A5A6 115 aa24.1■■□□□ 1.45
COL9A3-213ENST00000489045 SLC12A8A0AV02 714 aa24.1■■□□□ 1.45
COL9A3-213ENST00000489045 RNF225M0QZC1 329 aaPredicted RBP24.1■■□□□ 1.45
COL9A3-213ENST00000489045 AFPP02771 609 aaKnown RBP24.1■■□□□ 1.45
COL9A3-213ENST00000489045 ZNF806P0C7X5 589 aa24.1■■□□□ 1.45
COL9A3-213ENST00000489045 BCKDHBP21953 392 aa24.1■■□□□ 1.45
COL9A3-213ENST00000489045 MPLP40238 635 aa24.1■■□□□ 1.45
COL9A3-213ENST00000489045 PLA2G2CQ5R387 149 aa24.1■■□□□ 1.45
COL9A3-213ENST00000489045 RRAGAQ7L523 313 aa24.1■■□□□ 1.45
COL9A3-213ENST00000489045 RBBP8NLQ8NC74 664 aaPredicted RBP24.1■■□□□ 1.45
COL9A3-213ENST00000489045 EHBP1Q8NDI1 1231 aa24.1■■□□□ 1.45
COL9A3-213ENST00000489045 OLIG1Q8TAK6 271 aa24.1■■□□□ 1.45
COL9A3-213ENST00000489045 HMGB4Q8WW32 186 aa24.1■■□□□ 1.45
COL9A3-213ENST00000489045 KCTD13Q8WZ19 329 aa24.1■■□□□ 1.45
COL9A3-213ENST00000489045 P2RY11Q96G91 374 aa24.1■■□□□ 1.45
COL9A3-213ENST00000489045 ZSWIM1Q9BR11 485 aa24.1■■□□□ 1.45
COL9A3-213ENST00000489045 SMOC1Q9H4F8 434 aa24.1■■□□□ 1.45
COL9A3-213ENST00000489045 CHMP5Q9NZZ3 219 aa24.1■■□□□ 1.45
COL9A3-213ENST00000489045 KIAA1468Q9P260 1216 aa24.1■■□□□ 1.45
COL9A3-213ENST00000489045 BCCIPQ9P287 314 aaKnown RBP eCLIP24.1■■□□□ 1.45
COL9A3-213ENST00000489045 AGO1Q9UL18 857 aaKnown RBP24.1■■□□□ 1.45
COL9A3-213ENST00000489045 STARD13Q9Y3M8 1113 aa24.1■■□□□ 1.45
COL9A3-213ENST00000489045 CALCAP01258 141 aa24.09■■□□□ 1.45
COL9A3-213ENST00000489045 BRD2P25440 801 aaKnown RBP24.09■■□□□ 1.45
COL9A3-213ENST00000489045 DGKGP49619 791 aa24.09■■□□□ 1.45
COL9A3-213ENST00000489045 GCNT1Q02742 428 aa24.09■■□□□ 1.45
COL9A3-213ENST00000489045 AASDHQ4L235 1098 aaPredicted RBP24.09■■□□□ 1.45
COL9A3-213ENST00000489045 EGFLAMQ63HQ2 1017 aa24.09■■□□□ 1.45
COL9A3-213ENST00000489045 C11orf74Q86VG3 221 aa24.09■■□□□ 1.45
COL9A3-213ENST00000489045 C12orf50Q8NA57 414 aaPredicted RBP24.09■■□□□ 1.45
COL9A3-213ENST00000489045 OLA1Q9NTK5 396 aaKnown RBP24.09■■□□□ 1.45
COL9A3-213ENST00000489045 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.09■■□□□ 1.45
COL9A3-213ENST00000489045 TNRC6BQ9UPQ9 1833 aaKnown RBP24.09■■□□□ 1.45
COL9A3-213ENST00000489045 SPTBN2O15020 2390 aa24.09■■□□□ 1.45
COL9A3-213ENST00000489045 NCOR2Q9Y618 2525 aa24.09■■□□□ 1.45
COL9A3-213ENST00000489045 DCDC2BA2VCK2 349 aa24.08■■□□□ 1.45
COL9A3-213ENST00000489045 PRRT4C9JH25 899 aa24.08■■□□□ 1.45
COL9A3-213ENST00000489045 M0QYV0 167 aa24.08■■□□□ 1.45
COL9A3-213ENST00000489045 SLC30A4O14863 429 aa24.08■■□□□ 1.45
COL9A3-213ENST00000489045 CISD3P0C7P0 127 aa24.08■■□□□ 1.45
COL9A3-213ENST00000489045 LCP1P13796 627 aa24.08■■□□□ 1.45
COL9A3-213ENST00000489045 CHKAP35790 457 aa24.08■■□□□ 1.45
COL9A3-213ENST00000489045 WASP42768 502 aa24.08■■□□□ 1.45
COL9A3-213ENST00000489045 RGS7P49802 495 aa24.08■■□□□ 1.45
COL9A3-213ENST00000489045 CREB5Q02930 508 aa24.08■■□□□ 1.45
COL9A3-213ENST00000489045 PMS2CLQ68D20 193 aa24.08■■□□□ 1.45
COL9A3-213ENST00000489045 DENND1CQ8IV53 801 aa24.08■■□□□ 1.45
COL9A3-213ENST00000489045 EDEM1Q92611 657 aa24.08■■□□□ 1.45
COL9A3-213ENST00000489045 INTS2Q9H0H0 1204 aaKnown RBP24.08■■□□□ 1.45
COL9A3-213ENST00000489045 CEP192Q8TEP8 1941 aa24.08■■□□□ 1.44
COL9A3-213ENST00000489045 YJEFN3A6XGL0 299 aa24.07■■□□□ 1.44
COL9A3-213ENST00000489045 E7ENQ6 273 aa24.07■■□□□ 1.44
COL9A3-213ENST00000489045 FGFR1OPO95684 399 aaKnown RBP24.07■■□□□ 1.44
COL9A3-213ENST00000489045 PENKP01210 267 aaPredicted RBP24.07■■□□□ 1.44
COL9A3-213ENST00000489045 HOXB2P14652 356 aa24.07■■□□□ 1.44
COL9A3-213ENST00000489045 NTSR1P30989 418 aa24.07■■□□□ 1.44
COL9A3-213ENST00000489045 ZNF132P52740 706 aa24.07■■□□□ 1.44
COL9A3-213ENST00000489045 DAOAP59103 153 aa24.07■■□□□ 1.44
COL9A3-213ENST00000489045 STILQ15468 1287 aa24.07■■□□□ 1.44
COL9A3-213ENST00000489045 CNGA2Q16280 664 aa24.07■■□□□ 1.44
COL9A3-213ENST00000489045 FYB2Q5VWT5 728 aa24.07■■□□□ 1.44
COL9A3-213ENST00000489045 BSPRYQ5W0U4 402 aa24.07■■□□□ 1.44
COL9A3-213ENST00000489045 FMNL3Q8IVF7 1028 aa24.07■■□□□ 1.44
COL9A3-213ENST00000489045 PGBD3Q8N328 593 aa24.07■■□□□ 1.44
COL9A3-213ENST00000489045 SLC35F5Q8WV83 523 aa24.07■■□□□ 1.44
COL9A3-213ENST00000489045 RLN3Q8WXF3 142 aa24.07■■□□□ 1.44
COL9A3-213ENST00000489045 PLD4Q96BZ4 506 aa24.07■■□□□ 1.44
COL9A3-213ENST00000489045 KREMEN1Q96MU8 473 aa24.07■■□□□ 1.44
COL9A3-213ENST00000489045 ACOX2Q99424 681 aa24.07■■□□□ 1.44
COL9A3-213ENST00000489045 CNGB3Q9NQW8 809 aa24.07■■□□□ 1.44
COL9A3-213ENST00000489045 VPS45Q9NRW7 570 aa24.07■■□□□ 1.44
COL9A3-213ENST00000489045 RWDD2AQ9UIY3 292 aa24.07■■□□□ 1.44
COL9A3-213ENST00000489045 FBXO10Q9UK96 956 aa24.07■■□□□ 1.44
COL9A3-213ENST00000489045 BCLAF3A2AJT9 711 aaKnown RBP24.06■■□□□ 1.44
COL9A3-213ENST00000489045 PIK3R2O00459 728 aa24.06■■□□□ 1.44
COL9A3-213ENST00000489045 P2RY2P41231 377 aa24.06■■□□□ 1.44
COL9A3-213ENST00000489045 PMF1Q6P1K2 205 aa24.06■■□□□ 1.44
COL9A3-213ENST00000489045 CHPFQ8IZ52 775 aa24.06■■□□□ 1.44
COL9A3-213ENST00000489045 SCML4Q8N228 414 aa24.06■■□□□ 1.44
COL9A3-213ENST00000489045 RNF139Q8WU17 664 aa24.06■■□□□ 1.44
COL9A3-213ENST00000489045 SPACA7Q96KW9 195 aa24.06■■□□□ 1.44
COL9A3-213ENST00000489045 RXFP3Q9NSD7 469 aa24.06■■□□□ 1.44
COL9A3-213ENST00000489045 ABCC13Q9NSE7 274 aa24.06■■□□□ 1.44
COL9A3-213ENST00000489045 SFMBT1Q9UHJ3 866 aa24.06■■□□□ 1.44
COL9A3-213ENST00000489045 GABBR2O75899 941 aa24.05■■□□□ 1.44
COL9A3-213ENST00000489045 TRIP4Q15650 581 aaPredicted RBP24.05■■□□□ 1.44
COL9A3-213ENST00000489045 TCEAL6Q6IPX3 200 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms