RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 SOBPA7XYQ1 873 aa16.68■□□□□ 0.26
CLDN11-208ENST00000488989 GBP1P32455 592 aa16.68■□□□□ 0.26
CLDN11-208ENST00000488989 CXCR3P49682 368 aa16.68■□□□□ 0.26
CLDN11-208ENST00000488989 ATXN1P54253 815 aaKnown RBP16.68■□□□□ 0.26
CLDN11-208ENST00000488989 CTC1Q2NKJ3 1217 aa16.68■□□□□ 0.26
CLDN11-208ENST00000488989 GPR153Q6NV75 609 aa16.68■□□□□ 0.26
CLDN11-208ENST00000488989 UBL4BQ8N7F7 174 aa16.68■□□□□ 0.26
CLDN11-208ENST00000488989 TEKT4Q8WW24 435 aa16.68■□□□□ 0.26
CLDN11-208ENST00000488989 NTAN1Q96AB6 310 aa16.68■□□□□ 0.26
CLDN11-208ENST00000488989 SLC39A13Q96H72 371 aa16.68■□□□□ 0.26
CLDN11-208ENST00000488989 PEBP4Q96S96 227 aa16.68■□□□□ 0.26
CLDN11-208ENST00000488989 CCSER2Q9H7U1 834 aa16.68■□□□□ 0.26
CLDN11-208ENST00000488989 PIGVQ9NUD9 493 aa16.68■□□□□ 0.26
CLDN11-208ENST00000488989 HCFC1R1Q9NWW0 138 aa16.68■□□□□ 0.26
CLDN11-208ENST00000488989 DDIT4Q9NX09 232 aa16.68■□□□□ 0.26
CLDN11-208ENST00000488989 SNX12Q9UMY4 172 aa16.68■□□□□ 0.26
CLDN11-208ENST00000488989 CDH23Q9H251 3354 aa16.68■□□□□ 0.26
CLDN11-208ENST00000488989 NUP210Q8TEM1 1887 aaPredicted RBP16.67■□□□□ 0.26
CLDN11-208ENST00000488989 CES2O00748 559 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 MDM4O15151 490 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 PRPSAP2O60256 369 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 MOSPD3O75425 235 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 TBX18O95935 607 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 RHOP08100 348 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 KRT7P08729 469 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 SRGAP2BP0DMP2 458 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 ATP5C1P36542 298 aaKnown RBP16.67■□□□□ 0.26
CLDN11-208ENST00000488989 CCR2P41597 374 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 MARCKSL1P49006 195 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 AIF1P55008 147 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 PPP2R5DQ14738 602 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 BOLA3Q53S33 107 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 PRSS36Q5K4E3 855 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 BRMS1LQ5PSV4 323 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 TXNRD3NBQ6F5E7 133 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 ANKRD54Q6NXT1 300 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 RSRC2Q7L4I2 434 aaKnown RBP16.67■□□□□ 0.26
CLDN11-208ENST00000488989 PSTKQ8IV42 348 aaKnown RBP16.67■□□□□ 0.26
CLDN11-208ENST00000488989 KATNAL2Q8IYT4 538 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 ADAM32Q8TC27 787 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 MRPS31Q92665 395 aaKnown RBP16.67■□□□□ 0.26
CLDN11-208ENST00000488989 ALG3Q92685 438 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 LRCH3Q96II8 777 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 CARD9Q9H257 536 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 IGFLR1Q9H665 355 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 FAM204AQ9H8W3 233 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 DDX56Q9NY93 547 aaKnown RBP16.67■□□□□ 0.26
CLDN11-208ENST00000488989 MARCH2Q9P0N8 246 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 SFMBT1Q9UHJ3 866 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 NUDT5Q9UKK9 219 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 TLR6Q9Y2C9 796 aa16.67■□□□□ 0.26
CLDN11-208ENST00000488989 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.67■□□□□ 0.26
CLDN11-208ENST00000488989 NRG2O14511 850 aaPredicted RBP16.66■□□□□ 0.26
CLDN11-208ENST00000488989 LINC01565O15544 149 aa16.66■□□□□ 0.26
CLDN11-208ENST00000488989 COCHO43405 550 aa16.66■□□□□ 0.26
CLDN11-208ENST00000488989 IGLV3-27P01718 113 aa16.66■□□□□ 0.26
CLDN11-208ENST00000488989 MYL4P12829 197 aa16.66■□□□□ 0.26
CLDN11-208ENST00000488989 HOXB8P17481 243 aaPredicted RBP16.66■□□□□ 0.26
CLDN11-208ENST00000488989 TCP1P17987 556 aaKnown RBP16.66■□□□□ 0.26
CLDN11-208ENST00000488989 DDX6P26196 483 aaKnown RBP eCLIP16.66■□□□□ 0.26
CLDN11-208ENST00000488989 KPNA1P52294 538 aaPredicted RBP16.66■□□□□ 0.26
CLDN11-208ENST00000488989 RWDD2BP57060 319 aa16.66■□□□□ 0.26
CLDN11-208ENST00000488989 RING1Q06587 406 aa16.66■□□□□ 0.26
CLDN11-208ENST00000488989 SCAPQ12770 1279 aa16.66■□□□□ 0.26
CLDN11-208ENST00000488989 EFEMP1Q12805 493 aa16.66■□□□□ 0.26
CLDN11-208ENST00000488989 NME3Q13232 169 aa16.66■□□□□ 0.26
CLDN11-208ENST00000488989 TRIP4Q15650 581 aaPredicted RBP16.66■□□□□ 0.26
CLDN11-208ENST00000488989 C10orf120Q5SQS8 335 aa16.66■□□□□ 0.26
CLDN11-208ENST00000488989 SYCE2Q6PIF2 218 aa16.66■□□□□ 0.26
CLDN11-208ENST00000488989 PDZD4Q76G19 769 aaPredicted RBP16.66■□□□□ 0.26
CLDN11-208ENST00000488989 FAM131BQ86XD5 332 aa16.66■□□□□ 0.26
CLDN11-208ENST00000488989 SHKBP1Q8TBC3 707 aa16.66■□□□□ 0.26
CLDN11-208ENST00000488989 FAM71BQ8TC56 605 aa16.66■□□□□ 0.26
CLDN11-208ENST00000488989 SMG7Q92540 1137 aaKnown RBP16.66■□□□□ 0.26
CLDN11-208ENST00000488989 GCNAQ96QF7 691 aa16.66■□□□□ 0.26
CLDN11-208ENST00000488989 OSBPL9Q96SU4 736 aa16.66■□□□□ 0.26
CLDN11-208ENST00000488989 ARHGEF38Q9NXL2 777 aa16.66■□□□□ 0.26
CLDN11-208ENST00000488989 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.66■□□□□ 0.26
CLDN11-208ENST00000488989 PCSK1NQ9UHG2 260 aa16.66■□□□□ 0.26
CLDN11-208ENST00000488989 ZMYM5Q9UJ78 669 aa16.66■□□□□ 0.26
CLDN11-208ENST00000488989 DNMT3LQ9UJW3 386 aa16.66■□□□□ 0.26
CLDN11-208ENST00000488989 HBS1LQ9Y450 684 aaKnown RBP16.66■□□□□ 0.26
CLDN11-208ENST00000488989 SAR1BQ9Y6B6 198 aa16.66■□□□□ 0.26
CLDN11-208ENST00000488989 CLUHO75153 1309 aa16.66■□□□□ 0.26
CLDN11-208ENST00000488989 DENND4AQ7Z401 1863 aa16.65■□□□□ 0.26
CLDN11-208ENST00000488989 C2orf78A6NCI8 922 aa16.65■□□□□ 0.26
CLDN11-208ENST00000488989 SPDYE4A6NLX3 237 aa16.65■□□□□ 0.26
CLDN11-208ENST00000488989 ZNF197O14709 1029 aa16.65■□□□□ 0.26
CLDN11-208ENST00000488989 RARAP10276 462 aa16.65■□□□□ 0.26
CLDN11-208ENST00000488989 SSR1P43307 286 aaKnown RBP16.65■□□□□ 0.26
CLDN11-208ENST00000488989 ARSEP51690 589 aa16.65■□□□□ 0.26
CLDN11-208ENST00000488989 ATP13A4Q4VNC1 1196 aa16.65■□□□□ 0.26
CLDN11-208ENST00000488989 ERMARDQ5T6L9 678 aa16.65■□□□□ 0.26
CLDN11-208ENST00000488989 DCAF12L1Q5VU92 463 aa16.65■□□□□ 0.26
CLDN11-208ENST00000488989 SCYL2Q6P3W7 929 aa16.65■□□□□ 0.26
CLDN11-208ENST00000488989 SND1Q7KZF4 910 aaKnown RBP eCLIP16.65■□□□□ 0.26
CLDN11-208ENST00000488989 GRASPQ7Z6J2 395 aaPredicted RBP16.65■□□□□ 0.26
CLDN11-208ENST00000488989 GPR149Q86SP6 731 aa16.65■□□□□ 0.26
CLDN11-208ENST00000488989 CCDC185Q8N715 623 aa16.65■□□□□ 0.26
CLDN11-208ENST00000488989 C12orf76Q8N812 135 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms