RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 ADIGQ0VDE8 80 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 BST2Q10589 180 aaKnown RBP12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 CETN1Q12798 172 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 PAK1Q13153 545 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 CAMK4Q16566 473 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 EGFLAMQ63HQ2 1017 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 LCLAT1Q6UWP7 414 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 BHLHA9Q7RTU4 235 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 DENND1CQ8IV53 801 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 FRMD1Q8N878 549 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 EHBP1Q8NDI1 1231 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 OLIG1Q8TAK6 271 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 EDEM1Q92611 657 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 IPO9Q96P70 1041 aaKnown RBP12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 ACOX2Q99424 681 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 ZSWIM1Q9BR11 485 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 VPS45Q9NRW7 570 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 AGO1Q9UL18 857 aaKnown RBP12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 STRIP2Q9ULQ0 834 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 ZNF510Q9Y2H8 683 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 STARD13Q9Y3M8 1113 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 SDK1Q7Z5N4 2213 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 BCLAF3A2AJT9 711 aaKnown RBP12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 YJEFN3A6XGL0 299 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 E7ENQ6 273 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 PIK3R2O00459 728 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 MAP3K13O43283 966 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 GABBR2O75899 941 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 CAVIN2O95810 425 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 PAEPP09466 180 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 NTSR1P30989 418 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 RGS7P49802 495 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 KCNH2Q12809 1159 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 PKDCCQ504Y2 493 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 BSPRYQ5W0U4 402 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 PMS2CLQ68D20 193 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 TCEAL6Q6IPX3 200 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 SDE2Q6IQ49 451 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 FOXR2Q6PJQ5 311 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 TRMT11Q7Z4G4 463 aaKnown RBP12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 C11orf74Q86VG3 221 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 ARHGEF19Q8IW93 802 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 TRIM59Q8IWR1 403 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 CHPFQ8IZ52 775 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 SIX6OS1Q8N1H7 587 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 KCTD13Q8WZ19 329 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 TCEAL3Q969E4 200 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 DCLK3Q9C098 648 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 SFMBT1Q9UHJ3 866 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 CACNA1AO00555 2505 aa12.5□□□□□ -0.41
CCHCR1-215ENST00000488920 MYOFQ9NZM1 2061 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 A0A1W2PQF6 199 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 P4HA2O15460 535 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 GNA14O95837 355 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 PENKP01210 267 aaPredicted RBP12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 AFPP02771 609 aaKnown RBP12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 SETSIPP0DME0 302 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 HOXB2P14652 356 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 GABRG2P18507 467 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 BRD2P25440 801 aaKnown RBP12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 CHKAP35790 457 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 P2RY2P41231 377 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 DHPSP49366 369 aaPredicted RBP12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 UBE2HP62256 183 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 CNGA2Q16280 664 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 MAP7D1Q3KQU3 841 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 FYB2Q5VWT5 728 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 KIAA1211LQ6NV74 962 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 PMF1Q6P1K2 205 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 CREBRFQ8IUR6 639 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 FMNL3Q8IVF7 1028 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 TMEFF1Q8IYR6 380 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 RBBP8NLQ8NC74 664 aaPredicted RBP12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 RNF139Q8WU17 664 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 SLC35F5Q8WV83 523 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 INTS2Q9H0H0 1204 aaKnown RBP12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 KIAA1468Q9P260 1216 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 MBD1Q9UIS9 605 aaPredicted RBP12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 FBXO10Q9UK96 956 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 RAD54BQ9Y620 910 aa12.49□□□□□ -0.41
CCHCR1-215ENST00000488920 WASH3PC4AMC7 463 aa12.48□□□□□ -0.41
CCHCR1-215ENST00000488920 M0QYV0 167 aa12.48□□□□□ -0.41
CCHCR1-215ENST00000488920 TSPAN3O60637 253 aa12.48□□□□□ -0.41
CCHCR1-215ENST00000488920 KCNA4P22459 653 aa12.48□□□□□ -0.41
CCHCR1-215ENST00000488920 HARS2P49590 506 aaKnown RBP12.48□□□□□ -0.41
CCHCR1-215ENST00000488920 MARSP56192 900 aaKnown RBP12.48□□□□□ -0.41
CCHCR1-215ENST00000488920 TRIP4Q15650 581 aaPredicted RBP12.48□□□□□ -0.41
CCHCR1-215ENST00000488920 STPG1Q5TH74 334 aa12.48□□□□□ -0.41
CCHCR1-215ENST00000488920 IL31Q6EBC2 164 aa12.48□□□□□ -0.41
CCHCR1-215ENST00000488920 LPCAT2Q7L5N7 544 aa12.48□□□□□ -0.41
CCHCR1-215ENST00000488920 CYP2U1Q7Z449 544 aa12.48□□□□□ -0.41
CCHCR1-215ENST00000488920 DEFB119Q8N690 84 aa12.48□□□□□ -0.41
CCHCR1-215ENST00000488920 DDI1Q8WTU0 396 aa12.48□□□□□ -0.41
CCHCR1-215ENST00000488920 PIGKQ92643 395 aa12.48□□□□□ -0.41
CCHCR1-215ENST00000488920 PLD4Q96BZ4 506 aa12.48□□□□□ -0.41
CCHCR1-215ENST00000488920 SPACA7Q96KW9 195 aa12.48□□□□□ -0.41
CCHCR1-215ENST00000488920 KREMEN1Q96MU8 473 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms