RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 H0YGN5 161 aa3.31□□□□□ -1.88
CCDC93-209ENST00000488908 RRP9O43818 475 aaKnown RBP3.31□□□□□ -1.88
CCDC93-209ENST00000488908 UGDHO60701 494 aa3.31□□□□□ -1.88
CCDC93-209ENST00000488908 ST6GAL1P15907 406 aa3.31□□□□□ -1.88
CCDC93-209ENST00000488908 PTDSS1P48651 473 aaKnown RBP3.31□□□□□ -1.88
CCDC93-209ENST00000488908 DSCR9P59020 149 aa3.31□□□□□ -1.88
CCDC93-209ENST00000488908 DLGAP5Q15398 846 aa3.31□□□□□ -1.88
CCDC93-209ENST00000488908 SLC4A8Q2Y0W8 1093 aa3.31□□□□□ -1.88
CCDC93-209ENST00000488908 ATAT1Q5SQI0 421 aa3.31□□□□□ -1.88
CCDC93-209ENST00000488908 ZDHHC24Q6UX98 284 aa3.31□□□□□ -1.88
CCDC93-209ENST00000488908 MORC1Q86VD1 984 aa3.31□□□□□ -1.88
CCDC93-209ENST00000488908 UEVLDQ8IX04 471 aa3.31□□□□□ -1.88
CCDC93-209ENST00000488908 METTL25Q8N6Q8 603 aa3.31□□□□□ -1.88
CCDC93-209ENST00000488908 ZNF668Q96K58 619 aaPredicted RBP3.31□□□□□ -1.88
CCDC93-209ENST00000488908 NUP88Q99567 741 aaPredicted RBP3.31□□□□□ -1.88
CCDC93-209ENST00000488908 C6orf106Q9H6K1 298 aaPredicted RBP3.31□□□□□ -1.88
CCDC93-209ENST00000488908 SMURF2Q9HAU4 748 aa3.31□□□□□ -1.88
CCDC93-209ENST00000488908 MOV10Q9HCE1 1003 aaKnown RBP3.31□□□□□ -1.88
CCDC93-209ENST00000488908 HIF1ANQ9NWT6 349 aa3.31□□□□□ -1.88
CCDC93-209ENST00000488908 H7C4K7 107 aa3.3□□□□□ -1.88
CCDC93-209ENST00000488908 AGPSO00116 658 aa3.3□□□□□ -1.88
CCDC93-209ENST00000488908 PODXLO00592 558 aa3.3□□□□□ -1.88
CCDC93-209ENST00000488908 CA12O43570 354 aa3.3□□□□□ -1.88
CCDC93-209ENST00000488908 LDB3O75112 727 aa3.3□□□□□ -1.88
CCDC93-209ENST00000488908 PIAS2O75928 621 aa3.3□□□□□ -1.88
CCDC93-209ENST00000488908 RHCEP18577 417 aa3.3□□□□□ -1.88
CCDC93-209ENST00000488908 GALNSP34059 522 aa3.3□□□□□ -1.88
CCDC93-209ENST00000488908 ITGA8P53708 1063 aa3.3□□□□□ -1.88
CCDC93-209ENST00000488908 EIF4A1P60842 406 aaKnown RBP3.3□□□□□ -1.88
CCDC93-209ENST00000488908 WASHC2DQ5SRD0 308 aa3.3□□□□□ -1.88
CCDC93-209ENST00000488908 SRGAP1Q7Z6B7 1085 aa3.3□□□□□ -1.88
CCDC93-209ENST00000488908 DAAM2Q86T65 1068 aa3.3□□□□□ -1.88
CCDC93-209ENST00000488908 C11orf44Q8N8P7 122 aa3.3□□□□□ -1.88
CCDC93-209ENST00000488908 PIMREGQ9BSJ6 248 aa3.3□□□□□ -1.88
CCDC93-209ENST00000488908 RMI1Q9H9A7 625 aa3.3□□□□□ -1.88
CCDC93-209ENST00000488908 PLK2Q9NYY3 685 aa3.3□□□□□ -1.88
CCDC93-209ENST00000488908 MYO6Q9UM54 1294 aa3.3□□□□□ -1.88
CCDC93-209ENST00000488908 LUC7L2Q9Y383 392 aaKnown RBP3.3□□□□□ -1.88
CCDC93-209ENST00000488908 HEMK1Q9Y5R4 338 aaPredicted RBP3.3□□□□□ -1.88
CCDC93-209ENST00000488908 KIR2DS5A0A0G2JLQ3 304 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 RPS10-NUDT3A0A1W2PQS6 291 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 C16orf96A6NNT2 1141 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 KIR2DS3K7RE56 304 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 SNX2O60749 519 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 RASSF9O75901 435 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 CGAP01215 116 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 TMIGD3P0DMS9 266 aaPredicted RBP3.29□□□□□ -1.88
CCDC93-209ENST00000488908 KITP10721 976 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 EN2P19622 333 aaPredicted RBP3.29□□□□□ -1.88
CCDC93-209ENST00000488908 STK3Q13188 491 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 IZUMO4Q1ZYL8 232 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 SMTNL2Q2TAL5 461 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 EGFLAMQ63HQ2 1017 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 USP49Q70CQ1 688 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 TRILQ7L0X0 811 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 RTL10Q7L3V2 364 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 DENND1CQ8IV53 801 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 PRPF38AQ8NAV1 312 aaKnown RBP3.29□□□□□ -1.88
CCDC93-209ENST00000488908 OR56A3Q8NH54 315 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 LMO3Q8TAP4 145 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 PHF21BQ96EK2 531 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 SEZ6LQ9BYH1 1024 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 ASPSCR1Q9BZE9 553 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 TM6SF1Q9BZW5 370 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 ZCWPW1Q9H0M4 648 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 VPS45Q9NRW7 570 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 PCDHGB1Q9Y5G3 927 aa3.29□□□□□ -1.88
CCDC93-209ENST00000488908 WASHC2CQ9Y4E1 1318 aa3.28□□□□□ -1.88
CCDC93-209ENST00000488908 MBD3L4A6NDZ8 208 aaPredicted RBP3.28□□□□□ -1.88
CCDC93-209ENST00000488908 MBD3L3A6NE82 208 aaPredicted RBP3.28□□□□□ -1.88
CCDC93-209ENST00000488908 OFD1O75665 1012 aa3.28□□□□□ -1.88
CCDC93-209ENST00000488908 HOXC6P09630 235 aa3.28□□□□□ -1.88
CCDC93-209ENST00000488908 PKMP14618 531 aaKnown RBP3.28□□□□□ -1.88
CCDC93-209ENST00000488908 KLRC1P26715 233 aa3.28□□□□□ -1.88
CCDC93-209ENST00000488908 HTR1BP28222 390 aa3.28□□□□□ -1.88
CCDC93-209ENST00000488908 IDUAP35475 653 aa3.28□□□□□ -1.88
CCDC93-209ENST00000488908 RFX2P48378 723 aa3.28□□□□□ -1.88
CCDC93-209ENST00000488908 COMPP49747 757 aaPredicted RBP3.28□□□□□ -1.88
CCDC93-209ENST00000488908 ARHGEF7Q14155 803 aa3.28□□□□□ -1.88
CCDC93-209ENST00000488908 CLCA4Q14CN2 919 aa3.28□□□□□ -1.88
CCDC93-209ENST00000488908 CNGA3Q16281 694 aa3.28□□□□□ -1.88
CCDC93-209ENST00000488908 INO80DQ53TQ3 878 aaPredicted RBP3.28□□□□□ -1.88
CCDC93-209ENST00000488908 PIK3CD-AS1Q5SR53 167 aa3.28□□□□□ -1.88
CCDC93-209ENST00000488908 NPNTQ6UXI9 565 aa3.28□□□□□ -1.88
CCDC93-209ENST00000488908 P3H2Q8IVL5 708 aa3.28□□□□□ -1.88
CCDC93-209ENST00000488908 SMCR8Q8TEV9 937 aaPredicted RBP3.28□□□□□ -1.88
CCDC93-209ENST00000488908 KAT2BQ92831 832 aa3.28□□□□□ -1.88
CCDC93-209ENST00000488908 NT5C1BQ96P26 610 aa3.28□□□□□ -1.88
CCDC93-209ENST00000488908 HIST1H2AAQ96QV6 131 aa3.28□□□□□ -1.88
CCDC93-209ENST00000488908 HTATIP2Q9BUP3 242 aa3.28□□□□□ -1.88
CCDC93-209ENST00000488908 DHX36Q9H2U1 1008 aaKnown RBP3.28□□□□□ -1.88
CCDC93-209ENST00000488908 AQP7P3A6NL99 342 aa3.27□□□□□ -1.89
CCDC93-209ENST00000488908 PYCARD-AS1I3L0S3 204 aa3.27□□□□□ -1.89
CCDC93-209ENST00000488908 MARCH6O60337 910 aa3.27□□□□□ -1.89
CCDC93-209ENST00000488908 SOCS5O75159 536 aa3.27□□□□□ -1.89
CCDC93-209ENST00000488908 MBPP02686 304 aaPredicted RBP3.27□□□□□ -1.89
CCDC93-209ENST00000488908 TMEM225BP0DP42 221 aa3.27□□□□□ -1.89
CCDC93-209ENST00000488908 NCLP19338 710 aaKnown RBP3.27□□□□□ -1.89
CCDC93-209ENST00000488908 ART1P52961 327 aa3.27□□□□□ -1.89
CCDC93-209ENST00000488908 DNASE1L3Q13609 305 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms