RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 SDC4P31431 198 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 SERPINB4P48594 390 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 ZNF484Q5JVG2 852 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 MARCH8Q5T0T0 291 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 IFNLR1Q8IU57 520 aaPredicted RBP13.14□□□□□ -0.31
CLIC4-202ENST00000488683 ARID3BQ8IVW6 561 aaPredicted RBP13.14□□□□□ -0.31
CLIC4-202ENST00000488683 CDCA5Q96FF9 252 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 FAXDC2Q96IV6 333 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 EBF4Q9BQW3 602 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 WDR27A2RRH5 827 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 SLC15A5A6NIM6 579 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 MEI4A8MW99 385 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 CHADO15335 359 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 AMHP03971 560 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 ENO1P06733 434 aaKnown RBP13.13□□□□□ -0.31
CLIC4-202ENST00000488683 P4HA1P13674 534 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 OSBPP22059 807 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 CCND1P24385 295 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 NDUFV1P49821 464 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 RBP5P82980 135 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 TFDP2Q14188 446 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 CHI3L2Q15782 390 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 EML3Q32P44 896 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 PKDCCQ504Y2 493 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 MTHFD1LQ6UB35 978 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 KCNT2Q6UVM3 1135 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 ATG14Q6ZNE5 492 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 APOPT1Q96IL0 206 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 C16orf70Q9BSU1 422 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 IQCGQ9H095 443 aaKnown RBP13.13□□□□□ -0.31
CLIC4-202ENST00000488683 ITGA11Q9UKX5 1188 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 KCNH4Q9UQ05 1017 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 PSAT1Q9Y617 370 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 MKI67P46013 3256 aaKnown RBP13.13□□□□□ -0.31
CLIC4-202ENST00000488683 A8MXQ7 604 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 H3BRB1 525 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 CXCL11O14625 94 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 KRT36O76013 467 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 TROVE2P10155 538 aaKnown RBP eCLIP13.13□□□□□ -0.31
CLIC4-202ENST00000488683 VAV1P15498 845 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 ABL2P42684 1182 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 SLC18A2Q05940 514 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 KDSRQ06136 332 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 BST1Q10588 318 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 KPNB1Q14974 876 aaKnown RBP13.13□□□□□ -0.31
CLIC4-202ENST00000488683 FAM47CQ5HY64 1035 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 TREML1Q86YW5 311 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 SLC25A41Q8N5S1 370 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 DEPDC1BQ8WUY9 529 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 USP6NLQ92738 828 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 KCTD15Q96SI1 283 aaPredicted RBP13.13□□□□□ -0.31
CLIC4-202ENST00000488683 VPS11Q9H270 941 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 TUT1Q9H6E5 874 aaKnown RBP13.13□□□□□ -0.31
CLIC4-202ENST00000488683 ZNF358Q9NW07 568 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 GEMIN8Q9NWZ8 242 aaKnown RBP13.13□□□□□ -0.31
CLIC4-202ENST00000488683 C2CD2Q9Y426 696 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 NUP205Q92621 2012 aa13.13□□□□□ -0.31
CLIC4-202ENST00000488683 IQANK1A0A1B0GTG1 560 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 A0A1B0GUA9 196 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 SMAPO00193 183 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 RFPL1O75677 317 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 BEST1O76090 585 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 HAUS5O94927 633 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 DLDP09622 509 aaKnown RBP13.12□□□□□ -0.31
CLIC4-202ENST00000488683 NUMBP49757 651 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 ALDH18A1P54886 795 aaKnown RBP13.12□□□□□ -0.31
CLIC4-202ENST00000488683 TMPRSS15P98073 1019 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 POU5F1BQ06416 359 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 PEX6Q13608 980 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 HIC1Q14526 733 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 PRKD1Q15139 912 aaPredicted RBP13.12□□□□□ -0.31
CLIC4-202ENST00000488683 TAF11Q15544 211 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 PARP6Q2NL67 630 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 SLC45A4Q5BKX6 768 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 PPM1JQ5JR12 505 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 SLC9A4Q6AI14 798 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 BZW1Q7L1Q6 419 aaKnown RBP13.12□□□□□ -0.31
CLIC4-202ENST00000488683 ANKRD13AQ8IZ07 590 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 NDUFAF2Q8N183 169 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 EFCAB3Q8N7B9 438 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 FAM149B1Q96BN6 582 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 AGAP3Q96P47 875 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 TBCBQ99426 244 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 TRIM55Q9BYV6 548 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 NRDE2Q9H7Z3 1164 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 SLC5A4Q9NY91 659 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 CNTN3Q9P232 1028 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 TRIP12Q14669 1992 aaPredicted RBP13.12□□□□□ -0.31
CLIC4-202ENST00000488683 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.12□□□□□ -0.31
CLIC4-202ENST00000488683 CREB3O43889 395 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 SORBS2O94875 1100 aaKnown RBP13.12□□□□□ -0.31
CLIC4-202ENST00000488683 TSHRP16473 764 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 KCNA4P22459 653 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 TKTP29401 623 aaKnown RBP13.12□□□□□ -0.31
CLIC4-202ENST00000488683 L1CAMP32004 1257 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 SLC6A3Q01959 620 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 UBAP2LQ14157 1087 aaKnown RBP13.12□□□□□ -0.31
CLIC4-202ENST00000488683 PDCD7Q8N8D1 485 aaKnown RBP13.12□□□□□ -0.31
CLIC4-202ENST00000488683 AZIN2Q96A70 460 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 ALKBH8Q96BT7 664 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms