RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 NT5C1BQ96P26 610 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 METTL14Q9HCE5 456 aaKnown RBP11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 CLIC5Q9NZA1 410 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 MARCH2Q9P0N8 246 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 WDR35Q9P2L0 1181 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 HESX1Q9UBX0 185 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 SFMBT1Q9UHJ3 866 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 RAD54BQ9Y620 910 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 DOCK9Q9BZ29 2069 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 BCLAF3A2AJT9 711 aaKnown RBP11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 WASH3PC4AMC7 463 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 PRRT4C9JH25 899 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 RNF225M0QZC1 329 aaPredicted RBP11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 XPO1O14980 1071 aaKnown RBP11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 CACNG3O60359 315 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 CAVIN2O95810 425 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 ZBED1O96006 694 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 VDRP11473 427 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 LCP1P13796 627 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 HOXB2P14652 356 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 NTSR1P30989 418 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 DGKGP49619 791 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 BCAT1P54687 386 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 YWHAEP62258 255 aaKnown RBP11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 COG7P83436 770 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 PREPLQ4J6C6 727 aaPredicted RBP11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 PPM1JQ5JR12 505 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 RAB41Q5JT25 222 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 IL31Q6EBC2 164 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 TTI2Q6NXR4 508 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 Q6ZNB5 142 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 NUDT18Q6ZVK8 323 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 RRAGAQ7L523 313 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 CREBRFQ8IUR6 639 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 DENND1CQ8IV53 801 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 CHPFQ8IZ52 775 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 UBR7Q8N806 425 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 TFAP2BQ92481 460 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 EDEM1Q92611 657 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 PIGKQ92643 395 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 IPO9Q96P70 1041 aaKnown RBP11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 GTPBP4Q9BZE4 634 aaKnown RBP11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 UBXN6Q9BZV1 441 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 VPS45Q9NRW7 570 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 MARK1Q9P0L2 795 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 PCDHGA5Q9Y5G8 931 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 CACNA1BQ00975 2339 aa11.85□□□□□ -0.51
NIPAL3-207ENST00000488155 PATE3B3GLJ2 98 aa11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 CISD3P0C7P0 127 aa11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 TBXAS1P24557 533 aaPredicted RBP11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 BRD2P25440 801 aaKnown RBP11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 BST2Q10589 180 aaKnown RBP11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 KCNH2Q12809 1159 aa11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 MORC3Q14149 939 aa11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 CAMK4Q16566 473 aa11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 HSF5Q4G112 596 aaPredicted RBP11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 STPG1Q5TH74 334 aa11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 RNF43Q68DV7 783 aa11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 KIAA1211LQ6NV74 962 aa11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 CYP2U1Q7Z449 544 aa11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 TRMT11Q7Z4G4 463 aaKnown RBP11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 ARHGEF19Q8IW93 802 aa11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 SIX6OS1Q8N1H7 587 aa11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 ARHGAP18Q8N392 663 aa11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 OLIG1Q8TAK6 271 aa11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 CDK5RAP1Q96SZ6 601 aaKnown RBP11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 SRRTQ9BXP5 876 aaKnown RBP11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 SLC6A17Q9H1V8 727 aa11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 CACNA2D2Q9NY47 1150 aa11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 MBD1Q9UIS9 605 aaPredicted RBP11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 AGO1Q9UL18 857 aaKnown RBP11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 STRIP2Q9ULQ0 834 aa11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 CLEC4EQ9ULY5 219 aa11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 TP53BP1Q12888 1972 aaPredicted RBP11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 MAP1BP46821 2468 aaKnown RBP11.84□□□□□ -0.51
NIPAL3-207ENST00000488155 A0A1W2PQF6 199 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 BICDL2A1A5D9 508 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 YJEFN3A6XGL0 299 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 E7ENQ6 273 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 M0QYV0 167 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 O00370 1275 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 FOXD2O60548 495 aaPredicted RBP11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 TSPAN3O60637 253 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 GABRG2P18507 467 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 CHKAP35790 457 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 P2RY2P41231 377 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 PPP1R2P41236 205 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 PAK1Q13153 545 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 GEN1Q17RS7 908 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 MAP7D1Q3KQU3 841 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 BSPRYQ5W0U4 402 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 PM20D1Q6GTS8 502 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 SDE2Q6IQ49 451 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 BHLHA9Q7RTU4 235 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 FMNL3Q8IVF7 1028 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 ELOA2Q8IYF1 753 aaPredicted RBP11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 ZNF276Q8N554 614 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 LMO3Q8TAP4 145 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 IPO4Q8TEX9 1081 aaKnown RBP11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 CLEC4CQ8WTT0 213 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms