RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 ZNF165P49910 485 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 CDKN1CP49918 316 aaPredicted RBP2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 SUOXP51687 545 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 TMEM62Q0P6H9 643 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 MAPK7Q13164 816 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 SNW1Q13573 536 aaKnown RBP2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 BMT2Q1RMZ1 405 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 SLC5A9Q2M3M2 681 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 GAB4Q2WGN9 574 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 SLC45A4Q5BKX6 768 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 RILPL1Q5EBL4 403 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 C9orf57Q5W0N0 161 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 ATL3Q6DD88 541 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 OVOS1Q6IE37 1185 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 NEK5Q6P3R8 708 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 CCDC73Q6ZRK6 1079 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 USP37Q86T82 979 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 TMEM161BQ8NDZ6 487 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 STKLD1Q8NE28 680 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 TSTD1Q8NFU3 115 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 LPPQ93052 612 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 IGSF8Q969P0 613 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 CHAMP1Q96JM3 812 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 DPYSL5Q9BPU6 564 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 KXD1Q9BQD3 176 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 TCHPQ9BT92 498 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 SLC26A6Q9BXS9 759 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 CCDC86Q9H6F5 360 aaKnown RBP2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 ECT2Q9H8V3 914 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 KMT5AQ9NQR1 393 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 CEP72Q9P209 647 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 REV1Q9UBZ9 1251 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 USP25Q9UHP3 1055 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 SOX13Q9UN79 622 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 DNM3Q9UQ16 869 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 CKAP5Q14008 2032 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 IRAK2O43187 625 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 TBX1O43435 398 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 RFPL2O75678 378 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 RPN1P04843 607 aaKnown RBP2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 ITGB2P05107 769 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 FAM153BP0C7A2 387 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 CD59P13987 128 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 IBSPP21815 317 aaPredicted RBP2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 NME2P22392 152 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 MAOBP27338 520 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 ACTN2P35609 894 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 KIR2DL1P43626 348 aaPredicted RBP2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 ATP2C1P98194 919 aaPredicted RBP2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 SLC12A1Q13621 1099 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 GAS6Q14393 721 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 TEAD2Q15562 447 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 ZNF568Q3ZCX4 644 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 L1TD1Q5T7N2 865 aaKnown RBP2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 GPR158Q5T848 1215 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 DIEXFQ68CQ4 756 aaKnown RBP2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 DYMQ7RTS9 669 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 BRAPQ7Z569 592 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 UBE3DQ7Z6J8 389 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 DNAJB7Q7Z6W7 309 aaPredicted RBP2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 KBTBD6Q86V97 674 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 NAXDQ8IW45 347 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 CCDC117Q8IWD4 279 aaPredicted RBP2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 STK11IPQ8N1F8 1099 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 TMEM151AQ8N4L1 468 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 C18orf25Q96B23 403 aaPredicted RBP2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 XPO6Q96QU8 1125 aaKnown RBP2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 KRTAP4-7Q9BYR0 210 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 IL25Q9H293 177 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 FBXO44Q9H4M3 255 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 RPF1Q9H9Y2 349 aaKnown RBP2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 CYP3A43Q9HB55 503 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 GPRC5CQ9NQ84 441 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 OLA1Q9NTK5 396 aaKnown RBP2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 CLIC5Q9NZA1 410 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 DAAM1Q9Y4D1 1078 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 CSNK1G3Q9Y6M4 447 aa2.9□□□□□ -1.95
DEPDC1-203ENST00000488146 GOLGB1Q14789 3259 aaKnown RBP2.89□□□□□ -1.95
DEPDC1-203ENST00000488146 TARSL2A2RTX5 802 aaKnown RBP2.89□□□□□ -1.95
DEPDC1-203ENST00000488146 SLC38A8A6NNN8 435 aa2.89□□□□□ -1.95
DEPDC1-203ENST00000488146 TRIM38O00635 465 aa2.89□□□□□ -1.95
DEPDC1-203ENST00000488146 B3GAT3O94766 335 aa2.89□□□□□ -1.95
DEPDC1-203ENST00000488146 PENKP01210 267 aaPredicted RBP2.89□□□□□ -1.95
DEPDC1-203ENST00000488146 GSTP1P09211 210 aaKnown RBP2.89□□□□□ -1.95
DEPDC1-203ENST00000488146 CCDC192P0DO97 292 aa2.89□□□□□ -1.95
DEPDC1-203ENST00000488146 PLCG1P19174 1290 aa2.89□□□□□ -1.95
DEPDC1-203ENST00000488146 ARNTP27540 789 aa2.89□□□□□ -1.95
DEPDC1-203ENST00000488146 GTF2H1P32780 548 aa2.89□□□□□ -1.95
DEPDC1-203ENST00000488146 GJA4P35212 333 aa2.89□□□□□ -1.95
DEPDC1-203ENST00000488146 GRK6P43250 576 aa2.89□□□□□ -1.95
DEPDC1-203ENST00000488146 NPTX2P47972 431 aa2.89□□□□□ -1.95
DEPDC1-203ENST00000488146 GSK3AP49840 483 aa2.89□□□□□ -1.95
DEPDC1-203ENST00000488146 NOVA1P51513 510 aaKnown RBP2.89□□□□□ -1.95
DEPDC1-203ENST00000488146 SLC12A3P55017 1021 aa2.89□□□□□ -1.95
DEPDC1-203ENST00000488146 RBP5P82980 135 aa2.89□□□□□ -1.95
DEPDC1-203ENST00000488146 GFPT1Q06210 699 aaPredicted RBP2.89□□□□□ -1.95
DEPDC1-203ENST00000488146 EIF3IQ13347 325 aaKnown RBP2.89□□□□□ -1.95
DEPDC1-203ENST00000488146 MAP7Q14244 749 aa2.89□□□□□ -1.95
DEPDC1-203ENST00000488146 TMEM132DQ14C87 1099 aa2.89□□□□□ -1.95
DEPDC1-203ENST00000488146 SLC10A6Q3KNW5 377 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms