RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, human

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-213	ENST00000488131	BTK	Q06187	659 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CDK18	Q07002	472 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	PTK6	Q13882	451 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CTTN	Q14247	550 aa	Known RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ARSH	Q5FYA8	562 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	OGFRL1	Q5TC84	451 aa	Predicted RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SNRNP48	Q6IEG0	339 aa	Known RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	MRM1	Q6IN84	353 aa	Known RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ZNF790	Q6PG37	636 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	UNC5A	Q6ZN44	842 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	DCDC5	Q6ZRR9	648 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	NLRC3	Q7RTR2	1065 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CATIP	Q7Z7H3	387 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	PALB2	Q86YC2	1186 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TMEM126B	Q8IUX1	230 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	MCAT	Q8IVS2	390 aa	Known RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	BLID	Q8IZY5	108 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ZNF276	Q8N554	614 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	VGLL2	Q8N8G2	317 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	C19orf47	Q8N9M1	422 aa	Known RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	C2CD4A	Q8NCU7	369 aa	Predicted RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	GIPC3	Q8TF64	312 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CHPT1	Q8WUD6	406 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ZNF75CP	Q92670	426 aa	Predicted RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	MTBP	Q96DY7	904 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SNF8	Q96H20	258 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	DEPDC7	Q96QD5	511 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	HEPH	Q9BQS7	1158 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CCDC77	Q9BR77	488 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CEP41	Q9BYV8	373 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	NACAP1	Q9BZK3	213 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	KLC2	Q9H0B6	622 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131		Q9H521	79 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	KANSL2	Q9H9L4	492 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	PARVB	Q9HBI1	364 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	BLOC1S4	Q9NUP1	217 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	FAM105A	Q9NUU6	356 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TBC1D23	Q9NUY8	699 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	IGSF9	Q9P2J2	1179 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	DKK3	Q9UBP4	350 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	RSL24D1	Q9UHA3	163 aa	Known RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ADAM30	Q9UKF2	790 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	RAB26	Q9ULW5	256 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	AP4E1	Q9UPM8	1137 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	NEU2	Q9Y3R4	380 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TRIM17	Q9Y577	477 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	PCDHB2	Q9Y5E7	798 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SQOR	Q9Y6N5	450 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ROBO3	Q96MS0	1386 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	IGSF9B	Q9UPX0	1349 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	LAMB2	P55268	1798 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	UBR2	Q8IWV8	1755 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131		A0A1W2PRG0	241 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	GTPBP10	A4D1E9	387 aa	Known RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CFAP69	A5D8W1	941 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	IQCA1L	A6NCM1	817 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	MYMK	A6NI61	221 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	FOXO6	A8MYZ6	492 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TNFRSF10C	O14798	259 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	DHX15	O43143	795 aa	Known RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ITM2A	O43736	263 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CCNT2	O60583	730 aa	Known RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	DGKI	O75912	1065 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	MTA2	O94776	668 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	PARN	O95453	639 aa	Known RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	LDHA	P00338	332 aa	Known RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	C8B	P07358	591 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	DLD	P09622	509 aa	Known RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	OR52Z1	P0C646	297 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ZNF23	P17027	643 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	POLR2E	P19388	210 aa	Known RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	PEX2	P28328	305 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	GCA	P28676	217 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	RXRG	P48443	463 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ALDH3B2	P48448	385 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	VCP	P55072	806 aa	Known RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	PSMC1	P62191	440 aa	Known RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	COG7	P83436	770 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	FOLH1	Q04609	750 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ZBTB17	Q13105	803 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SLBP	Q14493	270 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SPCS2	Q15005	226 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TNIP1	Q15025	636 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	PTPRO	Q16827	1216 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	KCTD19	Q17RG1	926 aa	Predicted RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	EDRF1	Q3B7T1	1238 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ARL13B	Q3SXY8	428 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	HERC4	Q5GLZ8	1057 aa	Predicted RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SEL1L2	Q5TEA6	688 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	C16orf87	Q6PH81	154 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	RNF111	Q6ZNA4	994 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	PTF1A	Q7RTS3	328 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	NLRX1	Q86UT6	975 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CCDC25	Q86WR0	208 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CHSY1	Q86X52	802 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SLC13A5	Q86YT5	568 aa	Predicted RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	LRRC49	Q8IUZ0	686 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	RHOT2	Q8IXI1	618 aa		4.94	□□□□□ -1.62

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