RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 TRIM24O15164 1050 aa21.37■■□□□ 1.01
HDAC4-209ENST00000487617 AXIN1O15169 862 aa21.37■■□□□ 1.01
HDAC4-209ENST00000487617 CACNG3O60359 315 aa21.37■■□□□ 1.01
HDAC4-209ENST00000487617 FBXO21O94952 628 aa21.37■■□□□ 1.01
HDAC4-209ENST00000487617 KLF8O95600 359 aaPredicted RBP21.37■■□□□ 1.01
HDAC4-209ENST00000487617 CHKAP35790 457 aa21.37■■□□□ 1.01
HDAC4-209ENST00000487617 GPD2P43304 727 aa21.37■■□□□ 1.01
HDAC4-209ENST00000487617 MIIPQ5JXC2 388 aa21.37■■□□□ 1.01
HDAC4-209ENST00000487617 KIAA2013Q8IYS2 634 aa21.37■■□□□ 1.01
HDAC4-209ENST00000487617 TERB1Q8NA31 727 aa21.37■■□□□ 1.01
HDAC4-209ENST00000487617 TSTD1Q8NFU3 115 aa21.37■■□□□ 1.01
HDAC4-209ENST00000487617 CLEC4CQ8WTT0 213 aa21.37■■□□□ 1.01
HDAC4-209ENST00000487617 ZNF606Q8WXB4 792 aa21.37■■□□□ 1.01
HDAC4-209ENST00000487617 SHC3Q92529 594 aa21.37■■□□□ 1.01
HDAC4-209ENST00000487617 GOLGA1Q92805 767 aa21.37■■□□□ 1.01
HDAC4-209ENST00000487617 MIS12Q9H081 205 aa21.37■■□□□ 1.01
HDAC4-209ENST00000487617 SIX2Q9NPC8 291 aa21.37■■□□□ 1.01
HDAC4-209ENST00000487617 ACP6Q9NPH0 428 aa21.37■■□□□ 1.01
HDAC4-209ENST00000487617 SFMBT1Q9UHJ3 866 aa21.37■■□□□ 1.01
HDAC4-209ENST00000487617 HBS1LQ9Y450 684 aaKnown RBP21.37■■□□□ 1.01
HDAC4-209ENST00000487617 EP300Q09472 2414 aaPredicted RBP21.37■■□□□ 1.01
HDAC4-209ENST00000487617 MYOFQ9NZM1 2061 aa21.36■■□□□ 1.01
HDAC4-209ENST00000487617 DMDP11532 3685 aa21.36■■□□□ 1.01
HDAC4-209ENST00000487617 RPP40O75818 363 aaKnown RBP21.36■■□□□ 1.01
HDAC4-209ENST00000487617 KIR2DL1P43626 348 aaPredicted RBP21.36■■□□□ 1.01
HDAC4-209ENST00000487617 TRIP4Q15650 581 aaPredicted RBP21.36■■□□□ 1.01
HDAC4-209ENST00000487617 MEA1Q16626 185 aa21.36■■□□□ 1.01
HDAC4-209ENST00000487617 HSF5Q4G112 596 aaPredicted RBP21.36■■□□□ 1.01
HDAC4-209ENST00000487617 C10orf76Q5T2E6 689 aa21.36■■□□□ 1.01
HDAC4-209ENST00000487617 LAIR1Q6GTX8 287 aa21.36■■□□□ 1.01
HDAC4-209ENST00000487617 RBM43Q6ZSC3 357 aaKnown RBP21.36■■□□□ 1.01
HDAC4-209ENST00000487617 IL17RCQ8NAC3 791 aa21.36■■□□□ 1.01
HDAC4-209ENST00000487617 TXNDC5Q8NBS9 432 aaKnown RBP21.36■■□□□ 1.01
HDAC4-209ENST00000487617 GAB3Q8WWW8 586 aa21.36■■□□□ 1.01
HDAC4-209ENST00000487617 PLK2Q9NYY3 685 aa21.36■■□□□ 1.01
HDAC4-209ENST00000487617 DNAJC12Q9UKB3 198 aa21.36■■□□□ 1.01
HDAC4-209ENST00000487617 NFE2L3Q9Y4A8 694 aa21.36■■□□□ 1.01
HDAC4-209ENST00000487617 LTFP02788 710 aa21.35■■□□□ 1.01
HDAC4-209ENST00000487617 CHRM1P11229 460 aaPredicted RBP21.35■■□□□ 1.01
HDAC4-209ENST00000487617 ACADSBP45954 432 aa21.35■■□□□ 1.01
HDAC4-209ENST00000487617 HARS2P49590 506 aaKnown RBP21.35■■□□□ 1.01
HDAC4-209ENST00000487617 TCP11X2Q5H9J9 407 aa21.35■■□□□ 1.01
HDAC4-209ENST00000487617 EOGTQ5NDL2 527 aa21.35■■□□□ 1.01
HDAC4-209ENST00000487617 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.35■■□□□ 1.01
HDAC4-209ENST00000487617 SCUBE3Q8IX30 993 aa21.35■■□□□ 1.01
HDAC4-209ENST00000487617 ENOX1Q8TC92 643 aaKnown RBP21.35■■□□□ 1.01
HDAC4-209ENST00000487617 ZDHHC4Q9NPG8 344 aa21.35■■□□□ 1.01
HDAC4-209ENST00000487617 EBF1Q9UH73 591 aa21.35■■□□□ 1.01
HDAC4-209ENST00000487617 AJAP1Q9UKB5 411 aaPredicted RBP21.35■■□□□ 1.01
HDAC4-209ENST00000487617 OTOGLQ3ZCN5 2332 aa21.35■■□□□ 1.01
HDAC4-209ENST00000487617 GVINP1Q7Z2Y8 2422 aa21.34■■□□□ 1.01
HDAC4-209ENST00000487617 SGK1O00141 431 aa21.34■■□□□ 1.01
HDAC4-209ENST00000487617 MSI1O43347 362 aaKnown RBP21.34■■□□□ 1.01
HDAC4-209ENST00000487617 CYBBP04839 570 aa21.34■■□□□ 1.01
HDAC4-209ENST00000487617 EEF1GP26641 437 aaKnown RBP21.34■■□□□ 1.01
HDAC4-209ENST00000487617 RPL34P49207 117 aaKnown RBP21.34■■□□□ 1.01
HDAC4-209ENST00000487617 DGKGP49619 791 aa21.34■■□□□ 1.01
HDAC4-209ENST00000487617 DGKEP52429 567 aa21.34■■□□□ 1.01
HDAC4-209ENST00000487617 CRY1Q16526 586 aa21.34■■□□□ 1.01
HDAC4-209ENST00000487617 MSANTD2Q6P1R3 559 aa21.34■■□□□ 1.01
HDAC4-209ENST00000487617 SASS6Q6UVJ0 657 aa21.34■■□□□ 1.01
HDAC4-209ENST00000487617 ZNF513Q8N8E2 541 aaPredicted RBP21.34■■□□□ 1.01
HDAC4-209ENST00000487617 KCNV2Q8TDN2 545 aa21.34■■□□□ 1.01
HDAC4-209ENST00000487617 STK32AQ8WU08 396 aa21.34■■□□□ 1.01
HDAC4-209ENST00000487617 SART1O43290 800 aaKnown RBP21.33■■□□□ 1.01
HDAC4-209ENST00000487617 MBD3O95983 291 aa21.33■■□□□ 1.01
HDAC4-209ENST00000487617 PENKP01210 267 aaPredicted RBP21.33■■□□□ 1.01
HDAC4-209ENST00000487617 RETP07949 1114 aa21.33■■□□□ 1.01
HDAC4-209ENST00000487617 PTK2Q05397 1052 aa21.33■■□□□ 1.01
HDAC4-209ENST00000487617 FYB2Q5VWT5 728 aa21.33■■□□□ 1.01
HDAC4-209ENST00000487617 ANO7Q6IWH7 933 aa21.33■■□□□ 1.01
HDAC4-209ENST00000487617 TMEM92Q6UXU6 159 aa21.33■■□□□ 1.01
HDAC4-209ENST00000487617 TOGARAM2Q6ZUX3 1019 aa21.33■■□□□ 1.01
HDAC4-209ENST00000487617 TRMT11Q7Z4G4 463 aaKnown RBP21.33■■□□□ 1.01
HDAC4-209ENST00000487617 CPXM2Q8N436 756 aa21.33■■□□□ 1.01
HDAC4-209ENST00000487617 FAM160A2Q8N612 972 aaPredicted RBP21.33■■□□□ 1.01
HDAC4-209ENST00000487617 FAM149B1Q96BN6 582 aa21.33■■□□□ 1.01
HDAC4-209ENST00000487617 P2RY11Q96G91 374 aa21.33■■□□□ 1.01
HDAC4-209ENST00000487617 SLC4A5Q9BY07 1137 aa21.33■■□□□ 1.01
HDAC4-209ENST00000487617 TAB2Q9NYJ8 693 aa21.33■■□□□ 1.01
HDAC4-209ENST00000487617 CYTH4Q9UIA0 394 aa21.33■■□□□ 1.01
HDAC4-209ENST00000487617 FOXN3O00409 490 aaPredicted RBP21.32■■□□□ 1
HDAC4-209ENST00000487617 ADAM23O75077 832 aa21.32■■□□□ 1
HDAC4-209ENST00000487617 ALDH1A2O94788 518 aa21.32■■□□□ 1
HDAC4-209ENST00000487617 CISD3P0C7P0 127 aa21.32■■□□□ 1
HDAC4-209ENST00000487617 NCAM1P13591 858 aa21.32■■□□□ 1
HDAC4-209ENST00000487617 KCNMA1Q12791 1236 aa21.32■■□□□ 1
HDAC4-209ENST00000487617 SMYD5Q6GMV2 418 aa21.32■■□□□ 1
HDAC4-209ENST00000487617 CACNA2D4Q7Z3S7 1137 aa21.32■■□□□ 1
HDAC4-209ENST00000487617 GPR161Q8N6U8 529 aaKnown RBP21.32■■□□□ 1
HDAC4-209ENST00000487617 ANO10Q9NW15 660 aa21.32■■□□□ 1
HDAC4-209ENST00000487617 STARD13Q9Y3M8 1113 aa21.32■■□□□ 1
HDAC4-209ENST00000487617 PRRT4C9JH25 899 aa21.31■■□□□ 1
HDAC4-209ENST00000487617 E5RJQ4 531 aa21.31■■□□□ 1
HDAC4-209ENST00000487617 PNMA6AP0CW24 399 aaPredicted RBP21.31■■□□□ 1
HDAC4-209ENST00000487617 HNRNPLP14866 589 aaKnown RBP eCLIP21.31■■□□□ 1
HDAC4-209ENST00000487617 RAPGEF1Q13905 1077 aa21.31■■□□□ 1
HDAC4-209ENST00000487617 CCDC183Q5T5S1 534 aa21.31■■□□□ 1
HDAC4-209ENST00000487617 EGFLAMQ63HQ2 1017 aa21.31■■□□□ 1
HDAC4-209ENST00000487617 DPY19L2P1Q6NXN4 242 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms