RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 CDK5RAP1Q96SZ6 601 aaKnown RBP25.76■■□□□ 1.71
LIME1-206ENST00000487026 ULBP1Q9BZM6 244 aa25.76■■□□□ 1.71
LIME1-206ENST00000487026 HOOK1Q9UJC3 728 aaKnown RBP25.76■■□□□ 1.71
LIME1-206ENST00000487026 MAN1B1Q9UKM7 699 aa25.76■■□□□ 1.71
LIME1-206ENST00000487026 NUP205Q92621 2012 aa25.76■■□□□ 1.71
LIME1-206ENST00000487026 A0A1W2PQF6 199 aa25.75■■□□□ 1.71
LIME1-206ENST00000487026 C4orf47A7E2U8 309 aa25.75■■□□□ 1.71
LIME1-206ENST00000487026 ZBED1O96006 694 aa25.75■■□□□ 1.71
LIME1-206ENST00000487026 CORO1AP31146 461 aaKnown RBP25.75■■□□□ 1.71
LIME1-206ENST00000487026 PTGER3P43115 390 aa25.75■■□□□ 1.71
LIME1-206ENST00000487026 SLC8A3P57103 927 aa25.75■■□□□ 1.71
LIME1-206ENST00000487026 SGO2Q562F6 1265 aa25.75■■□□□ 1.71
LIME1-206ENST00000487026 RSRC2Q7L4I2 434 aaKnown RBP25.75■■□□□ 1.71
LIME1-206ENST00000487026 FAM124BQ9H5Z6 455 aaPredicted RBP25.75■■□□□ 1.71
LIME1-206ENST00000487026 MARCH2Q9P0N8 246 aa25.75■■□□□ 1.71
LIME1-206ENST00000487026 SLC12A8A0AV02 714 aa25.74■■□□□ 1.71
LIME1-206ENST00000487026 LNP1A1A4G5 178 aa25.74■■□□□ 1.71
LIME1-206ENST00000487026 KHNYNO15037 678 aaKnown RBP25.74■■□□□ 1.71
LIME1-206ENST00000487026 SDE2Q6IQ49 451 aa25.74■■□□□ 1.71
LIME1-206ENST00000487026 KIAA1211LQ6NV74 962 aa25.74■■□□□ 1.71
LIME1-206ENST00000487026 DENND1CQ8IV53 801 aa25.74■■□□□ 1.71
LIME1-206ENST00000487026 ARHGAP18Q8N392 663 aa25.74■■□□□ 1.71
LIME1-206ENST00000487026 DEFB119Q8N690 84 aa25.74■■□□□ 1.71
LIME1-206ENST00000487026 AGO1Q9UL18 857 aaKnown RBP25.74■■□□□ 1.71
LIME1-206ENST00000487026 ZNF510Q9Y2H8 683 aa25.74■■□□□ 1.71
LIME1-206ENST00000487026 RAD54BQ9Y620 910 aa25.74■■□□□ 1.71
LIME1-206ENST00000487026 TPRP12270 2363 aaKnown RBP25.74■■□□□ 1.71
LIME1-206ENST00000487026 WASH3PC4AMC7 463 aa25.73■■□□□ 1.71
LIME1-206ENST00000487026 PSMA7O14818 248 aa25.73■■□□□ 1.71
LIME1-206ENST00000487026 FMO5P49326 533 aa25.73■■□□□ 1.71
LIME1-206ENST00000487026 IRX4P78413 519 aa25.73■■□□□ 1.71
LIME1-206ENST00000487026 STIM1Q13586 685 aa25.73■■□□□ 1.71
LIME1-206ENST00000487026 BYSLQ13895 437 aaKnown RBP25.73■■□□□ 1.71
LIME1-206ENST00000487026 N4BP2L1Q5TBK1 243 aaPredicted RBP25.73■■□□□ 1.71
LIME1-206ENST00000487026 PM20D1Q6GTS8 502 aa25.73■■□□□ 1.71
LIME1-206ENST00000487026 KLHL10Q6JEL2 608 aa25.73■■□□□ 1.71
LIME1-206ENST00000487026 BHLHA9Q7RTU4 235 aa25.73■■□□□ 1.71
LIME1-206ENST00000487026 UBR7Q8N806 425 aa25.73■■□□□ 1.71
LIME1-206ENST00000487026 DHTKD1Q96HY7 919 aaPredicted RBP25.73■■□□□ 1.71
LIME1-206ENST00000487026 LSM14BQ9BX40 385 aaKnown RBP25.73■■□□□ 1.71
LIME1-206ENST00000487026 GTPBP4Q9BZE4 634 aaKnown RBP25.73■■□□□ 1.71
LIME1-206ENST00000487026 DCLK3Q9C098 648 aa25.73■■□□□ 1.71
LIME1-206ENST00000487026 LRRC4Q9HBW1 653 aa25.73■■□□□ 1.71
LIME1-206ENST00000487026 TMEM74BQ9NUR3 256 aa25.73■■□□□ 1.71
LIME1-206ENST00000487026 CACNA2D2Q9NY47 1150 aa25.73■■□□□ 1.71
LIME1-206ENST00000487026 CALCOCO1Q9P1Z2 691 aa25.73■■□□□ 1.71
LIME1-206ENST00000487026 HESX1Q9UBX0 185 aa25.73■■□□□ 1.71
LIME1-206ENST00000487026 FBXO10Q9UK96 956 aa25.73■■□□□ 1.71
LIME1-206ENST00000487026 GON4LQ3T8J9 2241 aa25.72■■□□□ 1.71
LIME1-206ENST00000487026 XPO1O14980 1071 aaKnown RBP25.72■■□□□ 1.71
LIME1-206ENST00000487026 BCAT1P54687 386 aa25.72■■□□□ 1.71
LIME1-206ENST00000487026 YWHAEP62258 255 aaKnown RBP25.72■■□□□ 1.71
LIME1-206ENST00000487026 BST2Q10589 180 aaKnown RBP25.72■■□□□ 1.71
LIME1-206ENST00000487026 CCDC40Q4G0X9 1142 aa25.72■■□□□ 1.71
LIME1-206ENST00000487026 FYB2Q5VWT5 728 aa25.72■■□□□ 1.71
LIME1-206ENST00000487026 IPO4Q8TEX9 1081 aaKnown RBP25.72■■□□□ 1.71
LIME1-206ENST00000487026 SLC6A17Q9H1V8 727 aa25.72■■□□□ 1.71
LIME1-206ENST00000487026 METTL14Q9HCE5 456 aaKnown RBP25.72■■□□□ 1.71
LIME1-206ENST00000487026 CD248Q9HCU0 757 aa25.72■■□□□ 1.71
LIME1-206ENST00000487026 STRIP2Q9ULQ0 834 aa25.72■■□□□ 1.71
LIME1-206ENST00000487026 KCNK5O95279 499 aa25.71■■□□□ 1.71
LIME1-206ENST00000487026 PENKP01210 267 aaPredicted RBP25.71■■□□□ 1.71
LIME1-206ENST00000487026 VDRP11473 427 aa25.71■■□□□ 1.71
LIME1-206ENST00000487026 BMP6P22004 513 aa25.71■■□□□ 1.71
LIME1-206ENST00000487026 CHKAP35790 457 aa25.71■■□□□ 1.71
LIME1-206ENST00000487026 ADIGQ0VDE8 80 aa25.71■■□□□ 1.71
LIME1-206ENST00000487026 TFAP2BQ92481 460 aa25.71■■□□□ 1.71
LIME1-206ENST00000487026 EDEM1Q92611 657 aa25.71■■□□□ 1.71
LIME1-206ENST00000487026 KAT5Q92993 513 aa25.71■■□□□ 1.71
LIME1-206ENST00000487026 CEP63Q96MT8 703 aa25.71■■□□□ 1.71
LIME1-206ENST00000487026 GABRG3Q99928 467 aa25.71■■□□□ 1.71
LIME1-206ENST00000487026 ATXN2Q99700 1313 aaKnown RBP25.7■■□□□ 1.71
LIME1-206ENST00000487026 ACACBO00763 2458 aa25.7■■□□□ 1.7
LIME1-206ENST00000487026 PPP1R3GB7ZBB8 358 aa25.7■■□□□ 1.7
LIME1-206ENST00000487026 O00370 1275 aa25.7■■□□□ 1.7
LIME1-206ENST00000487026 GADD45BO75293 160 aaPredicted RBP25.7■■□□□ 1.7
LIME1-206ENST00000487026 CALCAP01258 141 aa25.7■■□□□ 1.7
LIME1-206ENST00000487026 NDUFV2P19404 249 aa25.7■■□□□ 1.7
LIME1-206ENST00000487026 TBXAS1P24557 533 aaPredicted RBP25.7■■□□□ 1.7
LIME1-206ENST00000487026 TMEM270Q6UE05 265 aa25.7■■□□□ 1.7
LIME1-206ENST00000487026 IPO9Q96P70 1041 aaKnown RBP25.7■■□□□ 1.7
LIME1-206ENST00000487026 CLEC4EQ9ULY5 219 aa25.7■■□□□ 1.7
LIME1-206ENST00000487026 PCDHB4Q9Y5E5 795 aa25.7■■□□□ 1.7
LIME1-206ENST00000487026 YJEFN3A6XGL0 299 aa25.69■■□□□ 1.7
LIME1-206ENST00000487026 E7ENQ6 273 aa25.69■■□□□ 1.7
LIME1-206ENST00000487026 RNF225M0QZC1 329 aaPredicted RBP25.69■■□□□ 1.7
LIME1-206ENST00000487026 BIN1O00499 593 aa25.69■■□□□ 1.7
LIME1-206ENST00000487026 CDX4O14627 284 aaPredicted RBP25.69■■□□□ 1.7
LIME1-206ENST00000487026 ZBTB24O43167 697 aaPredicted RBP25.69■■□□□ 1.7
LIME1-206ENST00000487026 LCP1P13796 627 aa25.69■■□□□ 1.7
LIME1-206ENST00000487026 ITPKAP23677 461 aa25.69■■□□□ 1.7
LIME1-206ENST00000487026 MFAP3P55082 362 aa25.69■■□□□ 1.7
LIME1-206ENST00000487026 RPL6Q02878 288 aaKnown RBP25.69■■□□□ 1.7
LIME1-206ENST00000487026 GEN1Q17RS7 908 aa25.69■■□□□ 1.7
LIME1-206ENST00000487026 TRIM61Q5EBN2 209 aa25.69■■□□□ 1.7
LIME1-206ENST00000487026 BSPRYQ5W0U4 402 aa25.69■■□□□ 1.7
LIME1-206ENST00000487026 LYSMD4Q5XG99 296 aa25.69■■□□□ 1.7
LIME1-206ENST00000487026 TTI2Q6NXR4 508 aa25.69■■□□□ 1.7
LIME1-206ENST00000487026 SYT12Q8IV01 421 aa25.69■■□□□ 1.7
LIME1-206ENST00000487026 FMNL3Q8IVF7 1028 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms