RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 SMIM28A0A1B0GU29 152 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 TRIM64A6NGJ6 449 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 TRIM64BA6NI03 449 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 BOLA2-SMG1P6H3BVE0 249 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 PODXLO00592 558 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 TMCC2O75069 709 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 MOSPD3O75425 235 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 LETM1O95202 739 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-209ENST00000486618 ECEL1O95672 775 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 C1QTNF9P0C862 333 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 GJA1P17302 382 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 TYRP1P17643 537 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 CCNCP24863 283 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 MARCKSP29966 332 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-209ENST00000486618 RPL9P32969 192 aaKnown RBP7.26□□□□□ -1.25
HDAC3-209ENST00000486618 CTNNA1P35221 906 aaKnown RBP7.26□□□□□ -1.25
HDAC3-209ENST00000486618 MPLP40238 635 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 NAMPTP43490 491 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 SOX9P48436 509 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 CCT5P48643 541 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 NOVA1P51513 510 aaKnown RBP7.26□□□□□ -1.25
HDAC3-209ENST00000486618 EPHB3P54753 998 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 SESN3P58005 492 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 KRT83P78385 493 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 SARNPP82979 210 aaKnown RBP7.26□□□□□ -1.25
HDAC3-209ENST00000486618 APBA1Q02410 837 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 CCDC15Q0P6D6 951 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 PON2Q15165 354 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 TEAD2Q15562 447 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 CCDC6Q16204 474 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 CALCRLQ16602 461 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 DUOXA2Q1HG44 320 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 ARTNQ5T4W7 220 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 EEF1DP3Q658K8 133 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 KBTBD6Q86V97 674 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 C3orf58Q8NDZ4 430 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 UBASH3BQ8TF42 649 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 CHAC2Q8WUX2 184 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 HVCN1Q96D96 273 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 ZC3H10Q96K80 434 aaKnown RBP7.26□□□□□ -1.25
HDAC3-209ENST00000486618 IFT74Q96LB3 600 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 AIFM3Q96NN9 605 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 ELAC2Q9BQ52 826 aaKnown RBP7.26□□□□□ -1.25
HDAC3-209ENST00000486618 TTC12Q9H892 705 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-209ENST00000486618 GOLGA2P5Q9HBQ8 144 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 BRMS1Q9HCU9 246 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 ZNHIT6Q9NWK9 470 aaKnown RBP7.26□□□□□ -1.25
HDAC3-209ENST00000486618 THG1LQ9NWX6 298 aaKnown RBP7.26□□□□□ -1.25
HDAC3-209ENST00000486618 OBP2AQ9NY56 170 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 SOX13Q9UN79 622 aa7.26□□□□□ -1.25
HDAC3-209ENST00000486618 K7ERI5 159 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 TOR1BO14657 336 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 SKAP2O75563 359 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-209ENST00000486618 RHOBTB1O94844 696 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 FGF19O95750 216 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 EDN3P14138 238 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 IGFBP6P24592 240 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-209ENST00000486618 MCM4P33991 863 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 TXKP42681 527 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 ALDH1A3P47895 512 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 RENBPP51606 427 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 AMPD2Q01433 879 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 MRPL28Q13084 256 aaKnown RBP7.25□□□□□ -1.25
HDAC3-209ENST00000486618 ELF2Q15723 593 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 ITPRIPL2Q3MIP1 535 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 ARHGAP15Q53QZ3 475 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 XKR4Q5GH76 650 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 ARMC4Q5T2S8 1044 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 ATF7IP2Q5U623 682 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 PEAR1Q5VY43 1037 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-209ENST00000486618 NXNQ6DKJ4 435 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 RUFY3Q7L099 469 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 ARID3BQ8IVW6 561 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-209ENST00000486618 ELOA2Q8IYF1 753 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-209ENST00000486618 CCAR2Q8N163 923 aaKnown RBP7.25□□□□□ -1.25
HDAC3-209ENST00000486618 CAMKK1Q8N5S9 505 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 SHKBP1Q8TBC3 707 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 IPCEF1Q8WWN9 437 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-209ENST00000486618 WASF1Q92558 559 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 EXOC4Q96A65 974 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 TMEM209Q96SK2 561 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 EDEM2Q9BV94 578 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 CCDC113Q9H0I3 377 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 KIAA1586Q9HCI6 787 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 TUFT1Q9NNX1 390 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 ZFP64Q9NPA5 681 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 OSGEPQ9NPF4 335 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 PLCB1Q9NQ66 1216 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 LATS2Q9NRM7 1088 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 RXFP3Q9NSD7 469 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 GTSE1Q9NYZ3 720 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 TNFSF13BQ9Y275 285 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 ASB3Q9Y575 518 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 DGKBQ9Y6T7 804 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 GON4LQ3T8J9 2241 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 NUP205Q92621 2012 aa7.25□□□□□ -1.25
HDAC3-209ENST00000486618 ZNF638Q14966 1978 aaKnown RBP7.24□□□□□ -1.25
HDAC3-209ENST00000486618 ASCC3Q8N3C0 2202 aaKnown RBP7.24□□□□□ -1.25
HDAC3-209ENST00000486618 ABCA7Q8IZY2 2146 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 KIF26AQ9ULI4 1882 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms