RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 RPL34P49207 117 aaKnown RBP20.46■□□□□ 0.87
SNX5-213ENST00000486039 ARHGAP8P85298 464 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 LMNB2Q03252 620 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 KCNJ12Q14500 433 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 DMC1Q14565 340 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 EMC10Q5UCC4 262 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 DENND1BQ6P3S1 775 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 FMNL3Q8IVF7 1028 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 CAMKK1Q8N5S9 505 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 ENOX1Q8TC92 643 aaKnown RBP20.46■□□□□ 0.87
SNX5-213ENST00000486039 SHC3Q92529 594 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 ACDQ96AP0 544 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 HHIPQ96QV1 700 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 BBS2Q9BXC9 721 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 ABCC13Q9NSE7 274 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 OLA1Q9NTK5 396 aaKnown RBP20.46■□□□□ 0.87
SNX5-213ENST00000486039 DEC1Q9P2X7 70 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 SFMBT1Q9UHJ3 866 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 AGO1Q9UL18 857 aaKnown RBP20.46■□□□□ 0.87
SNX5-213ENST00000486039 ZNF510Q9Y2H8 683 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 CEP250Q9BV73 2442 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 TYRP14679 529 aa20.45■□□□□ 0.86
SNX5-213ENST00000486039 KIR2DL1P43626 348 aaPredicted RBP20.45■□□□□ 0.86
SNX5-213ENST00000486039 MRPS21P82921 87 aaKnown RBP20.45■□□□□ 0.86
SNX5-213ENST00000486039 KCNMA1Q12791 1236 aa20.45■□□□□ 0.86
SNX5-213ENST00000486039 TCP11X2Q5H9J9 407 aa20.45■□□□□ 0.86
SNX5-213ENST00000486039 DENND1CQ8IV53 801 aa20.45■□□□□ 0.86
SNX5-213ENST00000486039 IRGQQ8WZA9 623 aa20.45■□□□□ 0.86
SNX5-213ENST00000486039 DCLK3Q9C098 648 aa20.45■□□□□ 0.86
SNX5-213ENST00000486039 WDR35Q9P2L0 1181 aa20.45■□□□□ 0.86
SNX5-213ENST00000486039 DNAJC12Q9UKB3 198 aa20.45■□□□□ 0.86
SNX5-213ENST00000486039 NFE2L3Q9Y4A8 694 aa20.45■□□□□ 0.86
SNX5-213ENST00000486039 KIAA1549LQ6ZVL6 1849 aa20.45■□□□□ 0.86
SNX5-213ENST00000486039 CCDC163A0A0D9SF12 145 aa20.44■□□□□ 0.86
SNX5-213ENST00000486039 MED19A0JLT2 244 aaPredicted RBP20.44■□□□□ 0.86
SNX5-213ENST00000486039 TBC1D3BA6NDS4 549 aa20.44■□□□□ 0.86
SNX5-213ENST00000486039 THAP12O43422 761 aa20.44■□□□□ 0.86
SNX5-213ENST00000486039 MED7O43513 233 aa20.44■□□□□ 0.86
SNX5-213ENST00000486039 CACNG3O60359 315 aa20.44■□□□□ 0.86
SNX5-213ENST00000486039 TIE1P35590 1138 aa20.44■□□□□ 0.86
SNX5-213ENST00000486039 USP8P40818 1118 aa20.44■□□□□ 0.86
SNX5-213ENST00000486039 TNFRSF4P43489 277 aa20.44■□□□□ 0.86
SNX5-213ENST00000486039 SPEM2Q0P670 501 aa20.44■□□□□ 0.86
SNX5-213ENST00000486039 TRIP4Q15650 581 aaPredicted RBP20.44■□□□□ 0.86
SNX5-213ENST00000486039 MEA1Q16626 185 aa20.44■□□□□ 0.86
SNX5-213ENST00000486039 CCDC33Q8N5R6 958 aa20.44■□□□□ 0.86
SNX5-213ENST00000486039 TERB1Q8NA31 727 aa20.44■□□□□ 0.86
SNX5-213ENST00000486039 IL17RCQ8NAC3 791 aa20.44■□□□□ 0.86
SNX5-213ENST00000486039 RNF139Q8WU17 664 aa20.44■□□□□ 0.86
SNX5-213ENST00000486039 PLD4Q96BZ4 506 aa20.44■□□□□ 0.86
SNX5-213ENST00000486039 MIS12Q9H081 205 aa20.44■□□□□ 0.86
SNX5-213ENST00000486039 ZDHHC4Q9NPG8 344 aa20.44■□□□□ 0.86
SNX5-213ENST00000486039 DNAJC17Q9NVM6 304 aaKnown RBP20.44■□□□□ 0.86
SNX5-213ENST00000486039 PLK2Q9NYY3 685 aa20.44■□□□□ 0.86
SNX5-213ENST00000486039 CYTH4Q9UIA0 394 aa20.44■□□□□ 0.86
SNX5-213ENST00000486039 MMP17Q9ULZ9 603 aa20.44■□□□□ 0.86
SNX5-213ENST00000486039 DNAH14Q0VDD8 3507 aa20.44■□□□□ 0.86
SNX5-213ENST00000486039 LRP3O75074 770 aa20.43■□□□□ 0.86
SNX5-213ENST00000486039 FBXO21O94952 628 aa20.43■□□□□ 0.86
SNX5-213ENST00000486039 LTFP02788 710 aa20.43■□□□□ 0.86
SNX5-213ENST00000486039 EEF1GP26641 437 aaKnown RBP20.43■□□□□ 0.86
SNX5-213ENST00000486039 C11orf57Q6ZUT1 292 aaPredicted RBP20.43■□□□□ 0.86
SNX5-213ENST00000486039 SCUBE3Q8IX30 993 aa20.43■□□□□ 0.86
SNX5-213ENST00000486039 ALLCQ8N6M5 410 aa20.43■□□□□ 0.86
SNX5-213ENST00000486039 BHMTQ93088 406 aa20.43■□□□□ 0.86
SNX5-213ENST00000486039 XPO6Q96QU8 1125 aaKnown RBP20.43■□□□□ 0.86
SNX5-213ENST00000486039 SLC4A5Q9BY07 1137 aa20.43■□□□□ 0.86
SNX5-213ENST00000486039 ST7Q9NRC1 585 aa20.43■□□□□ 0.86
SNX5-213ENST00000486039 HCN2Q9UL51 889 aa20.43■□□□□ 0.86
SNX5-213ENST00000486039 HBS1LQ9Y450 684 aaKnown RBP20.43■□□□□ 0.86
SNX5-213ENST00000486039 FOXN3O00409 490 aaPredicted RBP20.42■□□□□ 0.86
SNX5-213ENST00000486039 MSI1O43347 362 aaKnown RBP20.42■□□□□ 0.86
SNX5-213ENST00000486039 KLF8O95600 359 aaPredicted RBP20.42■□□□□ 0.86
SNX5-213ENST00000486039 FYNP06241 537 aa20.42■□□□□ 0.86
SNX5-213ENST00000486039 CISD3P0C7P0 127 aa20.42■□□□□ 0.86
SNX5-213ENST00000486039 PNMA6AP0CW24 399 aaPredicted RBP20.42■□□□□ 0.86
SNX5-213ENST00000486039 HNRNPLP14866 589 aaKnown RBP eCLIP20.42■□□□□ 0.86
SNX5-213ENST00000486039 CHKAP35790 457 aa20.42■□□□□ 0.86
SNX5-213ENST00000486039 ATXN1P54253 815 aaKnown RBP20.42■□□□□ 0.86
SNX5-213ENST00000486039 PREPLQ4J6C6 727 aaPredicted RBP20.42■□□□□ 0.86
SNX5-213ENST00000486039 CDKAL1Q5VV42 579 aa20.42■□□□□ 0.86
SNX5-213ENST00000486039 FYB2Q5VWT5 728 aa20.42■□□□□ 0.86
SNX5-213ENST00000486039 GRAMD4Q6IC98 578 aa20.42■□□□□ 0.86
SNX5-213ENST00000486039 MSANTD2Q6P1R3 559 aa20.42■□□□□ 0.86
SNX5-213ENST00000486039 TOGARAM2Q6ZUX3 1019 aa20.42■□□□□ 0.86
SNX5-213ENST00000486039 CEP68Q76N32 757 aa20.42■□□□□ 0.86
SNX5-213ENST00000486039 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.42■□□□□ 0.86
SNX5-213ENST00000486039 FAM217AQ8IXS0 508 aa20.42■□□□□ 0.86
SNX5-213ENST00000486039 TXNDC5Q8NBS9 432 aaKnown RBP20.42■□□□□ 0.86
SNX5-213ENST00000486039 STK32AQ8WU08 396 aa20.42■□□□□ 0.86
SNX5-213ENST00000486039 TAB2Q9NYJ8 693 aa20.42■□□□□ 0.86
SNX5-213ENST00000486039 FBXO10Q9UK96 956 aa20.42■□□□□ 0.86
SNX5-213ENST00000486039 SGK1O00141 431 aa20.41■□□□□ 0.86
SNX5-213ENST00000486039 AXIN1O15169 862 aa20.41■□□□□ 0.86
SNX5-213ENST00000486039 ADAM23O75077 832 aa20.41■□□□□ 0.86
SNX5-213ENST00000486039 APBB3O95704 486 aa20.41■□□□□ 0.86
SNX5-213ENST00000486039 MBD3O95983 291 aa20.41■□□□□ 0.86
SNX5-213ENST00000486039 PENKP01210 267 aaPredicted RBP20.41■□□□□ 0.86
SNX5-213ENST00000486039 CLCN1P35523 988 aa20.41■□□□□ 0.86
SNX5-213ENST00000486039 ACADSBP45954 432 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms