RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 DACH1Q9UI36 760 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 STOML2Q9UJZ1 356 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 NAGPAQ9UK23 515 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 LSM7Q9UK45 103 aaKnown RBP7.35□□□□□ -1.23
VPS50-218ENST00000485994 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.35□□□□□ -1.23
VPS50-218ENST00000485994 SLC8A2Q9UPR5 921 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 PCDHB4Q9Y5E5 795 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 CNOT1A5YKK6 2376 aaKnown RBP7.35□□□□□ -1.23
VPS50-218ENST00000485994 KIAA1549LQ6ZVL6 1849 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 GFRA2O00451 464 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 NPC1O15118 1278 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 CACNG3O60359 315 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 FBXO21O94952 628 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 KAT7O95251 611 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 LATS1O95835 1130 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 PENKP01210 267 aaPredicted RBP7.34□□□□□ -1.23
VPS50-218ENST00000485994 RETP07949 1114 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 CISD3P0C7P0 127 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 HNRNPLP14866 589 aaKnown RBP eCLIP7.34□□□□□ -1.23
VPS50-218ENST00000485994 CD19P15391 556 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 TGM1P22735 817 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 GPD2P43304 727 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 ACADSBP45954 432 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 ZNF445P59923 1031 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 YWHAGP61981 247 aaKnown RBP eCLIP7.34□□□□□ -1.23
VPS50-218ENST00000485994 LRMPQ12912 555 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 DMC1Q14565 340 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 E2F5Q15329 346 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 C10orf120Q5SQS8 335 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 BSPRYQ5W0U4 402 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 BTBD8Q5XKL5 378 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 PMF1Q6P1K2 205 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 PKN3Q6P5Z2 889 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 GBP6Q6ZN66 633 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 TMEM110Q86TL2 294 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 RASSF3Q86WH2 238 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 TMEM25Q86YD3 366 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 ARHGEF19Q8IW93 802 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 FAM114A1Q8IWE2 563 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 BBS7Q8IWZ6 715 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 CPXM2Q8N436 756 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 RPLP0P6Q8NHW5 317 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 ZNF606Q8WXB4 792 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 WBP2Q969T9 261 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 CNOT6LQ96LI5 555 aaKnown RBP7.34□□□□□ -1.23
VPS50-218ENST00000485994 KREMEN1Q96MU8 473 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 IPO9Q96P70 1041 aaKnown RBP7.34□□□□□ -1.23
VPS50-218ENST00000485994 XPO6Q96QU8 1125 aaKnown RBP7.34□□□□□ -1.23
VPS50-218ENST00000485994 ZSWIM1Q9BR11 485 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 ULBP1Q9BZM6 244 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 NACA2Q9H009 215 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 INTS2Q9H0H0 1204 aaKnown RBP7.34□□□□□ -1.23
VPS50-218ENST00000485994 LRRC4Q9HBW1 653 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 UBE2TQ9NPD8 197 aaPredicted RBP7.34□□□□□ -1.23
VPS50-218ENST00000485994 C2orf42Q9NWW7 574 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 DEC1Q9P2X7 70 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 STRIP2Q9ULQ0 834 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 MMP17Q9ULZ9 603 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 SLC27A6Q9Y2P4 619 aa7.34□□□□□ -1.23
VPS50-218ENST00000485994 HBS1LQ9Y450 684 aaKnown RBP7.34□□□□□ -1.23
VPS50-218ENST00000485994 PCNX2A6NKB5 2137 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 TBC1D3BA6NDS4 549 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 LRRC10BA6NIK2 292 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 PRR5-ARHGAP8B1AHC4 643 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 TULP2O00295 520 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 SART1O43290 800 aaKnown RBP7.33□□□□□ -1.24
VPS50-218ENST00000485994 MED7O43513 233 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 TULP3O75386 442 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 KLKB1P03952 638 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 SLC9A1P19634 815 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 SDHBP21912 280 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 PON1P27169 355 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 FNTBP49356 437 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 DGKEP52429 567 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 DAOAP59103 153 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 ARHGAP8P85298 464 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 RING1Q06587 406 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 NNTQ13423 1086 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 SIM2Q14190 667 aaPredicted RBP7.33□□□□□ -1.24
VPS50-218ENST00000485994 CRY1Q16526 586 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 MAN2A1Q16706 1144 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 EXOC3L4Q17RC7 722 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 GOLGA7BQ2TAP0 167 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 MPP7Q5T2T1 576 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 RNF43Q68DV7 783 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 NAIF1Q69YI7 327 aaPredicted RBP7.33□□□□□ -1.24
VPS50-218ENST00000485994 DPY19L2P1Q6NXN4 242 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 MSANTD2Q6P1R3 559 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 TRIM65Q6PJ69 517 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 RRAGAQ7L523 313 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 CACNA2D4Q7Z3S7 1137 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 TRMT11Q7Z4G4 463 aaKnown RBP7.33□□□□□ -1.24
VPS50-218ENST00000485994 C11orf74Q86VG3 221 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 C12orf40Q86WS4 652 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 IL17RCQ8NAC3 791 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 RBBP8NLQ8NC74 664 aaPredicted RBP7.33□□□□□ -1.24
VPS50-218ENST00000485994 UBA3Q8TBC4 463 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 ENOX1Q8TC92 643 aaKnown RBP7.33□□□□□ -1.24
VPS50-218ENST00000485994 GAB3Q8WWW8 586 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 SHC3Q92529 594 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms