RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 CDC23Q9UJX2 597 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 VPS28Q9UK41 221 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 GRID1Q9ULK0 1009 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 TMED5Q9Y3A6 229 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 ZNF711Q9Y462 761 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 COL22A1Q8NFW1 1626 aaPredicted RBP4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 C4AP0C0L4 1744 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 C4BP0C0L5 1744 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 A0A087WV62 115 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 A0A0G2JLW4 131 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 A0A1B0GVL5 298 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 TCRBV5S4A2TA0A5A2 114 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 ZNF804BA4D1E1 1349 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 CTAGE9A4FU28 777 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 USP27XA6NNY8 438 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 LACTBL1A8MY62 500 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 ERVV-1B6SEH8 477 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 KIF28PB7ZC32 967 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 PI4K2BG5E9Z4 385 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 AGRPO00253 132 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 CYR61O00622 381 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 CAPN9O14815 690 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 HGSO14964 777 aaPredicted RBP4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 DTNBO60941 627 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 SRGAP2O75044 1071 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 PRKD3O94806 890 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 CFBP00751 764 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 CSTBP04080 98 aaKnown RBP4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 A1BGP04217 495 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 TPM1P09493 284 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 UQCRFS1P1P0C7P4 283 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 PFKFB1P16118 471 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 IFNAR1P17181 557 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 LAG3P18627 525 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 TRIM21P19474 475 aaKnown RBP4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 POU3F2P20265 443 aaPredicted RBP4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 ABCB4P21439 1286 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 FGFR2P21802 821 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 SFPQP23246 707 aaKnown RBP eCLIP4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 ACTN2P35609 894 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 IARSP41252 1262 aaKnown RBP4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 TECP42680 631 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 SYKP43405 635 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 ATP5OP48047 213 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 SLC6A11P48066 632 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 IFNAR2P48551 515 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 NT5C2P49902 561 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 SCNN1BP51168 640 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 MYL5Q02045 173 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 PPARDQ03181 441 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 PLS1Q14651 629 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 KCNB1Q14721 858 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 ICAM4Q14773 271 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 NAA25Q14CX7 972 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 SART3Q15020 963 aaKnown RBP4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 PCBP2Q15366 365 aaKnown RBP eCLIP4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 KIAA0753Q2KHM9 967 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 DPCR1Q3MIW9 517 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 KRT71Q3SY84 523 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 BOLA3Q53S33 107 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 PHF19Q5T6S3 580 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 STEAP3Q658P3 488 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 KAZNQ674X7 775 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 ARMCX5Q6P1M9 558 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 APOA5Q6Q788 366 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 PNPLA7Q6ZV29 1317 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 NUP54Q7Z3B4 507 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 SPATA2LQ8IUW3 424 aaPredicted RBP4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 LURAP1LQ8IV03 231 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 TIAM2Q8IVF5 1701 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 NOSTRINQ8IVI9 506 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 CMTR2Q8IYT2 770 aaKnown RBP4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 VPS52Q8N1B4 723 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 Q8N1Y9 231 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 OR2C3Q8N628 320 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 ANKRD52Q8NB46 1076 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 KYQ8NBH2 561 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 TXNDC5Q8NBS9 432 aaKnown RBP4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 FAM156AQ8NDB6 213 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 RTL9Q8NET4 1388 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 SPATA20Q8TB22 786 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 ACMSDQ8TDX5 336 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 IGDCC4Q8TDY8 1250 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 SH3RF3Q8TEJ3 882 aaPredicted RBP4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 WASF1Q92558 559 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 HSPH1Q92598 858 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 KISS1RQ969F8 398 aaPredicted RBP4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 ARL8AQ96BM9 186 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 PPP1R13BQ96KQ4 1090 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 KCNJ15Q99712 375 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 PHF20Q9BVI0 1012 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 ACAT2Q9BWD1 397 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 MRIQ9BWK5 157 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 SHANK3Q9BYB0 1731 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 PUS3Q9BZE2 481 aaKnown RBP4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 NT5C3AQ9H0P0 336 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 VCPKMTQ9H867 229 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 CERS4Q9HA82 394 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 GPRC5BQ9NZH0 403 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 PPP4R1LQ9P1A2 415 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms