RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	TNFAIP3	P21580	790 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	DRD1	P21728	446 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	MAN1A1	P33908	653 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	MAGEA10	P43363	369 aa	Predicted RBP	4.61	□□□□□ -1.67
FN1-222	ENST00000485567	CCR5	P51681	352 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	RBM5	P52756	815 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
FN1-222	ENST00000485567	GEMIN4	P57678	1058 aa	Known RBP	4.61	□□□□□ -1.67
FN1-222	ENST00000485567	SUMO2	P61956	95 aa	Known RBP	4.61	□□□□□ -1.67
FN1-222	ENST00000485567	RBM6	P78332	1123 aa	Known RBP	4.61	□□□□□ -1.67
FN1-222	ENST00000485567	LMOD3	Q0VAK6	560 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	EIF2B5	Q13144	721 aa	Known RBP	4.61	□□□□□ -1.67
FN1-222	ENST00000485567	MAPK7	Q13164	816 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	DNASE1L3	Q13609	305 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	DCTN1	Q14203	1278 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	AAK1	Q2M2I8	961 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	TBC1D25	Q3MII6	688 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	CTXN3	Q4LDR2	81 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	HYI	Q5T013	277 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	GRHL2	Q6ISB3	625 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	RNF207	Q6ZRF8	634 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	USP51	Q70EK9	711 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	RSRC2	Q7L4I2	434 aa	Known RBP	4.61	□□□□□ -1.67
FN1-222	ENST00000485567	SYT13	Q7L8C5	426 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	MAATS1	Q7Z4T9	603 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	PCYOX1L	Q8NBM8	494 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	CEP70	Q8NHQ1	597 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	CACTIN	Q8WUQ7	758 aa	Known RBP	4.61	□□□□□ -1.67
FN1-222	ENST00000485567	ASB10	Q8WXI3	467 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	HTRA1	Q92743	480 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	RFK	Q969G6	155 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	MCRS1	Q96EZ8	462 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	FAR2	Q96K12	515 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	PBK	Q96KB5	322 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	REEP2	Q9BRK0	252 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	AIFM2	Q9BRQ8	373 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	MECR	Q9BV79	373 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	MAP3K20	Q9NYL2	800 aa	Known RBP	4.61	□□□□□ -1.67
FN1-222	ENST00000485567	DKK3	Q9UBP4	350 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	TES	Q9UGI8	421 aa	Known RBP	4.61	□□□□□ -1.67
FN1-222	ENST00000485567	KCND3	Q9UK17	655 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	BAG5	Q9UL15	447 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	RRP7A	Q9Y3A4	280 aa	Known RBP	4.61	□□□□□ -1.67
FN1-222	ENST00000485567	TSC22D4	Q9Y3Q8	395 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	ITIH6	Q6UXX5	1313 aa		4.61	□□□□□ -1.67
FN1-222	ENST00000485567	VWC2L	B2RUY7	222 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	HNRNPR	O43390	633 aa	Known RBP	4.6	□□□□□ -1.67
FN1-222	ENST00000485567	TMPRSS11D	O60235	418 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	CYP3A4	P08684	503 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	ITGAM	P11215	1152 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	ZFX	P17010	805 aa	Predicted RBP	4.6	□□□□□ -1.67
FN1-222	ENST00000485567	YY1	P25490	414 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	MCM5	P33992	734 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	RXRG	P48443	463 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	TUB	P50607	506 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	TPTE	P56180	551 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
FN1-222	ENST00000485567	DLGAP5	Q15398	846 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	CDSN	Q15517	529 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	CYP1B1	Q16678	543 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	FAM187B	Q17R55	369 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	PLAC9	Q5JTB6	97 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	WDR78	Q5VTH9	848 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	ACSM6	Q6P461	480 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	PTCHD4	Q6ZW05	846 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	KRT27	Q7Z3Y8	459 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	WDR53	Q7Z5U6	358 aa	Predicted RBP	4.6	□□□□□ -1.67
FN1-222	ENST00000485567	SIRT6	Q8N6T7	355 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	SLC2A12	Q8TD20	617 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	XAGE5	Q8WWM1	108 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	HVCN1	Q96D96	273 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	KTI12	Q96EK9	354 aa	Predicted RBP	4.6	□□□□□ -1.67
FN1-222	ENST00000485567	FBXL20	Q96IG2	436 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567		Q96MF0	132 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	PRR25	Q96S07	402 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	NPAS1	Q99742	590 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	SERTAD4	Q9NUC0	356 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	ANKFY1	Q9P2R3	1169 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	MGAT4C	Q9UBM8	478 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	DNAJC16	Q9Y2G8	782 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	PCDHB7	Q9Y5E2	793 aa		4.6	□□□□□ -1.67
FN1-222	ENST00000485567	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.59	□□□□□ -1.67
FN1-222	ENST00000485567		B4E171	279 aa		4.59	□□□□□ -1.67
FN1-222	ENST00000485567		M0QZQ0	153 aa		4.59	□□□□□ -1.67
FN1-222	ENST00000485567	MBD4	O95243	580 aa		4.59	□□□□□ -1.67
FN1-222	ENST00000485567	CYP21A2	P08686	494 aa		4.59	□□□□□ -1.67
FN1-222	ENST00000485567	MYCL	P12524	364 aa	Predicted RBP	4.59	□□□□□ -1.67
FN1-222	ENST00000485567	ZNF37A	P17032	561 aa	Predicted RBP	4.59	□□□□□ -1.67
FN1-222	ENST00000485567	THBS4	P35443	961 aa		4.59	□□□□□ -1.67
FN1-222	ENST00000485567	KRT9	P35527	623 aa		4.59	□□□□□ -1.67
FN1-222	ENST00000485567	TSPAN7	P41732	249 aa		4.59	□□□□□ -1.67
FN1-222	ENST00000485567	LIFR	P42702	1097 aa		4.59	□□□□□ -1.67
FN1-222	ENST00000485567	CLCN2	P51788	898 aa		4.59	□□□□□ -1.67
FN1-222	ENST00000485567	PDE1A	P54750	535 aa		4.59	□□□□□ -1.67
FN1-222	ENST00000485567	EIF5	P55010	431 aa	Known RBP	4.59	□□□□□ -1.67
FN1-222	ENST00000485567	RPL15	P61313	204 aa	Known RBP	4.59	□□□□□ -1.67
FN1-222	ENST00000485567	BFSP2	Q13515	415 aa		4.59	□□□□□ -1.67
FN1-222	ENST00000485567	CBFB	Q13951	182 aa		4.59	□□□□□ -1.67
FN1-222	ENST00000485567	TXNRD1	Q16881	649 aa		4.59	□□□□□ -1.67
FN1-222	ENST00000485567	SPDYA	Q5MJ70	313 aa		4.59	□□□□□ -1.67
FN1-222	ENST00000485567	LY6G5C	Q5SRR4	150 aa		4.59	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms