RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 SIX6OS1Q8N1H7 587 aa16.65■□□□□ 0.26
SIK3-211ENST00000485363 PPM1KQ8N3J5 372 aa16.65■□□□□ 0.26
SIK3-211ENST00000485363 OLIG1Q8TAK6 271 aa16.65■□□□□ 0.26
SIK3-211ENST00000485363 UBA3Q8TBC4 463 aa16.65■□□□□ 0.26
SIK3-211ENST00000485363 HMGB4Q8WW32 186 aa16.65■□□□□ 0.26
SIK3-211ENST00000485363 SPACA7Q96KW9 195 aa16.65■□□□□ 0.26
SIK3-211ENST00000485363 IPO9Q96P70 1041 aaKnown RBP16.65■□□□□ 0.26
SIK3-211ENST00000485363 OLA1Q9NTK5 396 aaKnown RBP16.65■□□□□ 0.26
SIK3-211ENST00000485363 PCDHB4Q9Y5E5 795 aa16.65■□□□□ 0.26
SIK3-211ENST00000485363 NUP205Q92621 2012 aa16.65■□□□□ 0.26
SIK3-211ENST00000485363 SLC12A8A0AV02 714 aa16.64■□□□□ 0.25
SIK3-211ENST00000485363 KLKB1P03952 638 aa16.64■□□□□ 0.25
SIK3-211ENST00000485363 NTSR1P30989 418 aa16.64■□□□□ 0.25
SIK3-211ENST00000485363 MARSP56192 900 aaKnown RBP16.64■□□□□ 0.25
SIK3-211ENST00000485363 STX17P56962 302 aa16.64■□□□□ 0.25
SIK3-211ENST00000485363 ADIGQ0VDE8 80 aa16.64■□□□□ 0.25
SIK3-211ENST00000485363 KCNH2Q12809 1159 aa16.64■□□□□ 0.25
SIK3-211ENST00000485363 BYSLQ13895 437 aaKnown RBP16.64■□□□□ 0.25
SIK3-211ENST00000485363 LCLAT1Q6UWP7 414 aa16.64■□□□□ 0.25
SIK3-211ENST00000485363 TRIM59Q8IWR1 403 aa16.64■□□□□ 0.25
SIK3-211ENST00000485363 PGBD3Q8N328 593 aa16.64■□□□□ 0.25
SIK3-211ENST00000485363 TRIML1Q8N9V2 468 aa16.64■□□□□ 0.25
SIK3-211ENST00000485363 KCTD13Q8WZ19 329 aa16.64■□□□□ 0.25
SIK3-211ENST00000485363 BHMTQ93088 406 aa16.64■□□□□ 0.25
SIK3-211ENST00000485363 PLK2Q9NYY3 685 aa16.64■□□□□ 0.25
SIK3-211ENST00000485363 AGO1Q9UL18 857 aaKnown RBP16.64■□□□□ 0.25
SIK3-211ENST00000485363 BCLAF3A2AJT9 711 aaKnown RBP16.63■□□□□ 0.25
SIK3-211ENST00000485363 PRRT4C9JH25 899 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 FGFR1OPO95684 399 aaKnown RBP16.63■□□□□ 0.25
SIK3-211ENST00000485363 CAVIN2O95810 425 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 PENKP01210 267 aaPredicted RBP16.63■□□□□ 0.25
SIK3-211ENST00000485363 CISD3P0C7P0 127 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 HOXB2P14652 356 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 BCKDHBP21953 392 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 P2RY2P41231 377 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 LIMK1P53667 647 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 STILQ15468 1287 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 PKDCCQ504Y2 493 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 EGFLAMQ63HQ2 1017 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 TOGARAM2Q6ZUX3 1019 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 BHLHA9Q7RTU4 235 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 DENND1CQ8IV53 801 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 CHPFQ8IZ52 775 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 SCML4Q8N228 414 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 EHBP1Q8NDI1 1231 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 LMO3Q8TAP4 145 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 RNF139Q8WU17 664 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 TFAP2BQ92481 460 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 NDRG1Q92597 394 aaKnown RBP16.63■□□□□ 0.25
SIK3-211ENST00000485363 PLD4Q96BZ4 506 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 SRRTQ9BXP5 876 aaKnown RBP16.63■□□□□ 0.25
SIK3-211ENST00000485363 SMOC1Q9H4F8 434 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 CNGB3Q9NQW8 809 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 FBXO10Q9UK96 956 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 HCN2Q9UL51 889 aa16.63■□□□□ 0.25
SIK3-211ENST00000485363 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.63■□□□□ 0.25
SIK3-211ENST00000485363 PLXND1Q9Y4D7 1925 aa16.62■□□□□ 0.25
SIK3-211ENST00000485363 LAMA1P25391 3075 aa16.62■□□□□ 0.25
SIK3-211ENST00000485363 ZBTB24O43167 697 aaPredicted RBP16.62■□□□□ 0.25
SIK3-211ENST00000485363 MAP3K13O43283 966 aa16.62■□□□□ 0.25
SIK3-211ENST00000485363 AFPP02771 609 aaKnown RBP16.62■□□□□ 0.25
SIK3-211ENST00000485363 CYBBP04839 570 aa16.62■□□□□ 0.25
SIK3-211ENST00000485363 WASP42768 502 aa16.62■□□□□ 0.25
SIK3-211ENST00000485363 UBE2HP62256 183 aa16.62■□□□□ 0.25
SIK3-211ENST00000485363 GCNT1Q02742 428 aa16.62■□□□□ 0.25
SIK3-211ENST00000485363 CNGA2Q16280 664 aa16.62■□□□□ 0.25
SIK3-211ENST00000485363 FYB2Q5VWT5 728 aa16.62■□□□□ 0.25
SIK3-211ENST00000485363 BSPRYQ5W0U4 402 aa16.62■□□□□ 0.25
SIK3-211ENST00000485363 IL31Q6EBC2 164 aa16.62■□□□□ 0.25
SIK3-211ENST00000485363 RRAGAQ7L523 313 aa16.62■□□□□ 0.25
SIK3-211ENST00000485363 CYP2U1Q7Z449 544 aa16.62■□□□□ 0.25
SIK3-211ENST00000485363 CPXM2Q8N436 756 aa16.62■□□□□ 0.25
SIK3-211ENST00000485363 RBBP8NLQ8NC74 664 aaPredicted RBP16.62■□□□□ 0.25
SIK3-211ENST00000485363 RLN3Q8WXF3 142 aa16.62■□□□□ 0.25
SIK3-211ENST00000485363 DDX1Q92499 740 aaKnown RBP16.62■□□□□ 0.25
SIK3-211ENST00000485363 KAT5Q92993 513 aa16.62■□□□□ 0.25
SIK3-211ENST00000485363 ABCC13Q9NSE7 274 aa16.62■□□□□ 0.25
SIK3-211ENST00000485363 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.62■□□□□ 0.25
SIK3-211ENST00000485363 SLC27A6Q9Y2P4 619 aa16.62■□□□□ 0.25
SIK3-211ENST00000485363 YJEFN3A6XGL0 299 aa16.61■□□□□ 0.25
SIK3-211ENST00000485363 E7ENQ6 273 aa16.61■□□□□ 0.25
SIK3-211ENST00000485363 M0QYV0 167 aa16.61■□□□□ 0.25
SIK3-211ENST00000485363 RNF225M0QZC1 329 aaPredicted RBP16.61■□□□□ 0.25
SIK3-211ENST00000485363 LCP1P13796 627 aa16.61■□□□□ 0.25
SIK3-211ENST00000485363 DHPSP49366 369 aaPredicted RBP16.61■□□□□ 0.25
SIK3-211ENST00000485363 HARS2P49590 506 aaKnown RBP16.61■□□□□ 0.25
SIK3-211ENST00000485363 TRIP4Q15650 581 aaPredicted RBP16.61■□□□□ 0.25
SIK3-211ENST00000485363 LPCAT2Q7L5N7 544 aa16.61■□□□□ 0.25
SIK3-211ENST00000485363 FMNL3Q8IVF7 1028 aa16.61■□□□□ 0.25
SIK3-211ENST00000485363 ARHGEF19Q8IW93 802 aa16.61■□□□□ 0.25
SIK3-211ENST00000485363 SLC35F5Q8WV83 523 aa16.61■□□□□ 0.25
SIK3-211ENST00000485363 EDEM1Q92611 657 aa16.61■□□□□ 0.25
SIK3-211ENST00000485363 ACOX2Q99424 681 aa16.61■□□□□ 0.25
SIK3-211ENST00000485363 RXFP3Q9NSD7 469 aa16.61■□□□□ 0.25
SIK3-211ENST00000485363 KIAA1468Q9P260 1216 aa16.61■□□□□ 0.25
SIK3-211ENST00000485363 HBS1LQ9Y450 684 aaKnown RBP16.61■□□□□ 0.25
SIK3-211ENST00000485363 SPTBN2O15020 2390 aa16.61■□□□□ 0.25
SIK3-211ENST00000485363 A0A1W2PQF6 199 aa16.6■□□□□ 0.25
SIK3-211ENST00000485363 GFRA2O00451 464 aa16.6■□□□□ 0.25
SIK3-211ENST00000485363 GABRG2P18507 467 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms