RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 STK4Q13043 487 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 CUL4BQ13620 913 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 TRIP6Q15654 476 aaKnown RBP13.71□□□□□ -0.21
HDAC6-227ENST00000485102 PLEKHG6Q3KR16 790 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 SCARA5Q6ZMJ2 495 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 TPGS1Q6ZTW0 290 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 GPRIN1Q7Z2K8 1008 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 CCDC186Q7Z3E2 898 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 TADA2BQ86TJ2 420 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 PROSER1Q86XN7 944 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 CHCHD4Q8N4Q1 142 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 CYFIP2Q96F07 1278 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 CYP3A43Q9HB55 503 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 NMUR1Q9HB89 426 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 CACNA2D2Q9NY47 1150 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 WSB2Q9NYS7 404 aaPredicted RBP13.71□□□□□ -0.21
HDAC6-227ENST00000485102 THAP10Q9P2Z0 257 aaPredicted RBP13.71□□□□□ -0.21
HDAC6-227ENST00000485102 HMGXB4Q9UGU5 601 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 ATP6V1DQ9Y5K8 247 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 USP3Q9Y6I4 520 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 GOLGA4Q13439 2230 aaKnown RBP13.71□□□□□ -0.22
HDAC6-227ENST00000485102 ASXL3Q9C0F0 2248 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 A0A1B0GTW7 788 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 WASH3PC4AMC7 463 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 SH3BP5O60239 455 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 CBFA2T3O75081 653 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 STC2O76061 302 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 IGLV3-19P01714 112 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 SLFN14P0C7P3 912 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 RARGP13631 454 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 OXTRP30559 389 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 MCCD1P59942 119 aaPredicted RBP13.7□□□□□ -0.22
HDAC6-227ENST00000485102 DLG4P78352 724 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 COG7P83436 770 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 C1orf220Q5T0J3 134 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 RESP18Q5W5W9 173 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 ATL3Q6DD88 541 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 DBX2Q6ZNG2 339 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 RGL4Q8IZJ4 473 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 KIAA0895Q8NCT3 520 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 FAXDC2Q96IV6 333 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 CDK5RAP1Q96SZ6 601 aaKnown RBP13.7□□□□□ -0.22
HDAC6-227ENST00000485102 NT5C1AQ9BXI3 368 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 DCLK3Q9C098 648 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 FAM13BQ9NYF5 915 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 KIAA1522Q9P206 1035 aaPredicted RBP13.7□□□□□ -0.22
HDAC6-227ENST00000485102 STON1Q9Y6Q2 735 aa13.7□□□□□ -0.22
HDAC6-227ENST00000485102 URB1O60287 2271 aaKnown RBP13.7□□□□□ -0.22
HDAC6-227ENST00000485102 CKAP5Q14008 2032 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 PLXNB3Q9ULL4 1909 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 A0A1W2PQH9 124 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 CYP26A1O43174 497 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 KLKB1P03952 638 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 MYL1P05976 194 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 HOXB3P14651 431 aaPredicted RBP13.69□□□□□ -0.22
HDAC6-227ENST00000485102 MFAP3P55082 362 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 COL9A2Q14055 689 aaPredicted RBP13.69□□□□□ -0.22
HDAC6-227ENST00000485102 STARD3Q14849 445 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 EIF4HQ15056 248 aaKnown RBP13.69□□□□□ -0.22
HDAC6-227ENST00000485102 FUT11Q495W5 492 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 C10orf120Q5SQS8 335 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 FYB2Q5VWT5 728 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 CCNI2Q6ZMN8 369 aaPredicted RBP13.69□□□□□ -0.22
HDAC6-227ENST00000485102 SCD5Q86SK9 330 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 OR2I1PQ8NGU4 316 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 ELMO3Q96BJ8 720 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 P2RY11Q96G91 374 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 PIWIL1Q96J94 861 aaKnown RBP13.69□□□□□ -0.22
HDAC6-227ENST00000485102 TWNKQ96RR1 684 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 DUSP16Q9BY84 665 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 UBXN6Q9BZV1 441 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 MKRN2Q9H000 416 aaKnown RBP13.69□□□□□ -0.22
HDAC6-227ENST00000485102 PCED1AQ9H1Q7 454 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 PRDM16Q9HAZ2 1276 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 CD93Q9NPY3 652 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 FAM49BQ9NUQ9 324 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 PCDHA7Q9UN72 937 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 LHX6Q9UPM6 363 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 TRAF3IP3Q9Y228 551 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 PCDHB9Q9Y5E1 797 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 RAD54BQ9Y620 910 aa13.69□□□□□ -0.22
HDAC6-227ENST00000485102 METTL12A8MUP2 240 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 TIMM44O43615 452 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 CILPO75339 1184 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 HLA-DRAP01903 254 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 NR3C1P04150 777 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 FTH1P19P0C7X4 201 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 RALAP11233 206 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 ADORA2BP29275 332 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 AFMP43652 599 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 NUCB2P80303 420 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 GRIK2Q13002 908 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 ORC1Q13415 861 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 NFIL3Q16649 462 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 SPOPLQ6IQ16 392 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 NAXDQ8IW45 347 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 CEP57L1Q8IYX8 460 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 CPXM2Q8N436 756 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 RBBP8NLQ8NC74 664 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-227ENST00000485102 C1orf216Q8TAB5 229 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms