RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 DNAJC17Q9NVM6 304 aaKnown RBP12.85□□□□□ -0.35
MSH5-216ENST00000484309 CYTH4Q9UIA0 394 aa12.85□□□□□ -0.35
MSH5-216ENST00000484309 SPTBN4Q9H254 2564 aa12.85□□□□□ -0.35
MSH5-216ENST00000484309 ABCA7Q8IZY2 2146 aa12.85□□□□□ -0.35
MSH5-216ENST00000484309 NUP205Q92621 2012 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 TBC1D3BA6NDS4 549 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.84□□□□□ -0.35
MSH5-216ENST00000484309 MED7O43513 233 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 HRO43593 1189 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 KLF8O95600 359 aaPredicted RBP12.84□□□□□ -0.35
MSH5-216ENST00000484309 LTFP02788 710 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 EEF1GP26641 437 aaKnown RBP12.84□□□□□ -0.35
MSH5-216ENST00000484309 EIF2DP41214 584 aaKnown RBP12.84□□□□□ -0.35
MSH5-216ENST00000484309 GRIA2P42262 883 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 KCNMA1Q12791 1236 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 RAPGEF1Q13905 1077 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 STX1AQ16623 288 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 C10orf76Q5T2E6 689 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 CCDC183Q5T5S1 534 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 GRAMD4Q6IC98 578 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 DPY19L2P1Q6NXN4 242 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 TOGARAM2Q6ZUX3 1019 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 SCUBE3Q8IX30 993 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 ENOX1Q8TC92 643 aaKnown RBP12.84□□□□□ -0.35
MSH5-216ENST00000484309 ERLEC1Q96DZ1 483 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 HSFY1Q96LI6 401 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 FAM81BQ96LP2 452 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 VPS16Q9H269 839 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 ABCC13Q9NSE7 274 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 OLA1Q9NTK5 396 aaKnown RBP12.84□□□□□ -0.35
MSH5-216ENST00000484309 TMEM63CQ9P1W3 806 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 DEC1Q9P2X7 70 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 NCDNQ9UBB6 729 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 TJP2Q9UDY2 1190 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 AGO1Q9UL18 857 aaKnown RBP12.84□□□□□ -0.35
MSH5-216ENST00000484309 FHOD1Q9Y613 1164 aa12.84□□□□□ -0.35
MSH5-216ENST00000484309 E5RJQ4 531 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 FOXN3O00409 490 aaPredicted RBP12.83□□□□□ -0.36
MSH5-216ENST00000484309 CACNG3O60359 315 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 HNRNPLP14866 589 aaKnown RBP eCLIP12.83□□□□□ -0.364e-6■■□□□ 12.5
MSH5-216ENST00000484309 WASP42768 502 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 KLK7P49862 253 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 SIM2Q14190 667 aaPredicted RBP12.83□□□□□ -0.36
MSH5-216ENST00000484309 KRT31Q15323 416 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 CT47A1Q5JQC4 288 aaPredicted RBP12.83□□□□□ -0.36
MSH5-216ENST00000484309 CDKAL1Q5VV42 579 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 CEP68Q76N32 757 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 SYT13Q7L8C5 426 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 WDR5BQ86VZ2 330 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 SCML4Q8N228 414 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 TERB1Q8NA31 727 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 TXNDC5Q8NBS9 432 aaKnown RBP12.83□□□□□ -0.36
MSH5-216ENST00000484309 TSTD1Q8NFU3 115 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 IRGQQ8WZA9 623 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 GOLGA1Q92805 767 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 FAM149B1Q96BN6 582 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 PLD4Q96BZ4 506 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 XPO6Q96QU8 1125 aaKnown RBP12.83□□□□□ -0.36
MSH5-216ENST00000484309 TPSD1Q9BZJ3 242 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 DCLK3Q9C098 648 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 PLCB1Q9NQ66 1216 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 ANO10Q9NW15 660 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 FANCLQ9NW38 375 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 MARK1Q9P0L2 795 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 WDR35Q9P2L0 1181 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 PLXND1Q9Y4D7 1925 aa12.83□□□□□ -0.36
MSH5-216ENST00000484309 SGK1O00141 431 aa12.82□□□□□ -0.36
MSH5-216ENST00000484309 PAPSS1O43252 624 aaPredicted RBP12.82□□□□□ -0.36
MSH5-216ENST00000484309 TSPAN3O60637 253 aa12.82□□□□□ -0.36
MSH5-216ENST00000484309 FBXO21O94952 628 aa12.82□□□□□ -0.36
MSH5-216ENST00000484309 CHRM1P11229 460 aaPredicted RBP12.82□□□□□ -0.36
MSH5-216ENST00000484309 NCAM1P13591 858 aa12.82□□□□□ -0.36
MSH5-216ENST00000484309 CLCN1P35523 988 aa12.82□□□□□ -0.36
MSH5-216ENST00000484309 KIR2DL1P43626 348 aaPredicted RBP12.82□□□□□ -0.36
MSH5-216ENST00000484309 DGKGP49619 791 aa12.82□□□□□ -0.36
MSH5-216ENST00000484309 MRPS21P82921 87 aaKnown RBP12.82□□□□□ -0.36
MSH5-216ENST00000484309 PDCLQ13371 301 aa12.82□□□□□ -0.36
MSH5-216ENST00000484309 DRAP1Q14919 205 aaPredicted RBP12.82□□□□□ -0.36
MSH5-216ENST00000484309 TRIP4Q15650 581 aaPredicted RBP12.82□□□□□ -0.36
MSH5-216ENST00000484309 ANO7Q6IWH7 933 aa12.82□□□□□ -0.36
MSH5-216ENST00000484309 MSANTD2Q6P1R3 559 aa12.82□□□□□ -0.36
MSH5-216ENST00000484309 TMEM92Q6UXU6 159 aa12.82□□□□□ -0.36
MSH5-216ENST00000484309 SLC47A2Q86VL8 602 aa12.82□□□□□ -0.36
MSH5-216ENST00000484309 KIAA2013Q8IYS2 634 aa12.82□□□□□ -0.36
MSH5-216ENST00000484309 ZNF513Q8N8E2 541 aaPredicted RBP12.82□□□□□ -0.36
MSH5-216ENST00000484309 IL17RCQ8NAC3 791 aa12.82□□□□□ -0.36
MSH5-216ENST00000484309 C1orf131Q8NDD1 294 aaKnown RBP12.82□□□□□ -0.36
MSH5-216ENST00000484309 ADAM32Q8TC27 787 aa12.82□□□□□ -0.36
MSH5-216ENST00000484309 RUBCNQ92622 972 aa12.82□□□□□ -0.36
MSH5-216ENST00000484309 PIWIL1Q96J94 861 aaKnown RBP12.82□□□□□ -0.36
MSH5-216ENST00000484309 SLC4A5Q9BY07 1137 aa12.82□□□□□ -0.36
MSH5-216ENST00000484309 HCN2Q9UL51 889 aa12.82□□□□□ -0.36
MSH5-216ENST00000484309 RAB23Q9ULC3 237 aa12.82□□□□□ -0.36
MSH5-216ENST00000484309 MMP17Q9ULZ9 603 aa12.82□□□□□ -0.36
MSH5-216ENST00000484309 NAALADL1Q9UQQ1 740 aa12.82□□□□□ -0.36
MSH5-216ENST00000484309 INVSQ9Y283 1065 aa12.82□□□□□ -0.36
MSH5-216ENST00000484309 ZNF510Q9Y2H8 683 aa12.82□□□□□ -0.36
MSH5-216ENST00000484309 HBS1LQ9Y450 684 aaKnown RBP12.82□□□□□ -0.36
MSH5-216ENST00000484309 NYNRINQ9P2P1 1898 aaKnown RBP12.81□□□□□ -0.36
MSH5-216ENST00000484309 PRRT4C9JH25 899 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms