RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 KLK13Q9UKR3 277 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 LHX6Q9UPM6 363 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 NUP205Q92621 2012 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 TBC1D3BA6NDS4 549 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 ZNF840PA6NDX5 716 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 KCNJ18B7U540 433 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 SLC9A3R1O14745 358 aaPredicted RBP10.52□□□□□ -0.73
CPSF4-213ENST00000484112 AP1G2O75843 785 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 ADH1CP00326 375 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 VDRP11473 427 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 ADH5P11766 374 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 ITPKAP23677 461 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 TUBP50607 506 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 RAD23BP54727 409 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 MFAP3P55082 362 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 SLC7A9P82251 487 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 TYRO3Q06418 890 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 RING1Q06587 406 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 TAF10Q12962 218 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 BYSLQ13895 437 aaKnown RBP10.52□□□□□ -0.73
CPSF4-213ENST00000484112 KCNJ12Q14500 433 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 MEA1Q16626 185 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 TCP11X2Q5H9J9 407 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 CDKAL1Q5VV42 579 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 SNX30Q5VWJ9 437 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 TRIM65Q6PJ69 517 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 LRSAM1Q6UWE0 723 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 CREBRFQ8IUR6 639 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 NAT16Q8N8M0 369 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 SLC4A11Q8NBS3 891 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 ERLEC1Q96DZ1 483 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 HEXIM2Q96MH2 286 aaKnown RBP10.52□□□□□ -0.73
CPSF4-213ENST00000484112 TWNKQ96RR1 684 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 DUSP16Q9BY84 665 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 INTS2Q9H0H0 1204 aaKnown RBP10.52□□□□□ -0.73
CPSF4-213ENST00000484112 KRT82Q9NSB4 513 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 APEX2Q9UBZ4 518 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 HMGXB4Q9UGU5 601 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 CNTN6Q9UQ52 1028 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 MSRB2Q9Y3D2 182 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 NEUROG3Q9Y4Z2 214 aa10.52□□□□□ -0.73
CPSF4-213ENST00000484112 MYO16Q9Y6X6 1858 aa10.51□□□□□ -0.73
CPSF4-213ENST00000484112 LRRC10BA6NIK2 292 aa10.51□□□□□ -0.73
CPSF4-213ENST00000484112 SMTNL1A8MU46 457 aa10.51□□□□□ -0.73
CPSF4-213ENST00000484112 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.51□□□□□ -0.73
CPSF4-213ENST00000484112 ADAM23O75077 832 aa10.51□□□□□ -0.73
CPSF4-213ENST00000484112 ACO1P21399 889 aaKnown RBP10.51□□□□□ -0.73
CPSF4-213ENST00000484112 YWHAQP27348 245 aa10.51□□□□□ -0.73
CPSF4-213ENST00000484112 RDXP35241 583 aaKnown RBP10.51□□□□□ -0.73
CPSF4-213ENST00000484112 GRIA2P42262 883 aa10.51□□□□□ -0.73
CPSF4-213ENST00000484112 WASP42768 502 aa10.51□□□□□ -0.73
CPSF4-213ENST00000484112 KIR2DL1P43626 348 aaPredicted RBP10.51□□□□□ -0.73
CPSF4-213ENST00000484112 PSEN1P49768 467 aa10.51□□□□□ -0.73
CPSF4-213ENST00000484112 RPL6Q02878 288 aaKnown RBP10.51□□□□□ -0.73
CPSF4-213ENST00000484112 GFPT1Q06210 699 aaPredicted RBP10.51□□□□□ -0.73
CPSF4-213ENST00000484112 ACAP1Q15027 740 aa10.51□□□□□ -0.73
CPSF4-213ENST00000484112 MAP7D1Q3KQU3 841 aa10.51□□□□□ -0.73
CPSF4-213ENST00000484112 HSF5Q4G112 596 aaPredicted RBP10.51□□□□□ -0.73
CPSF4-213ENST00000484112 SGO2Q562F6 1265 aa10.51□□□□□ -0.73
CPSF4-213ENST00000484112 LY6G5CQ5SRR4 150 aa10.51□□□□□ -0.73
CPSF4-213ENST00000484112 CAVIN1Q6NZI2 390 aaKnown RBP10.51□□□□□ -0.73
CPSF4-213ENST00000484112 SLC23A3Q6PIS1 610 aa10.51□□□□□ -0.73
CPSF4-213ENST00000484112 CLEC20AQ6ZU45 233 aa10.51□□□□□ -0.73
CPSF4-213ENST00000484112 CHCHD4Q8N4Q1 142 aa10.51□□□□□ -0.73
CPSF4-213ENST00000484112 C12orf29Q8N999 325 aa10.51□□□□□ -0.73
CPSF4-213ENST00000484112 ANKRD52Q8NB46 1076 aa10.51□□□□□ -0.73
CPSF4-213ENST00000484112 OR2I1PQ8NGU4 316 aa10.51□□□□□ -0.73
CPSF4-213ENST00000484112 ARID3AQ99856 593 aa10.51□□□□□ -0.73
CPSF4-213ENST00000484112 PILRBQ9UKJ0 227 aa10.51□□□□□ -0.73
CPSF4-213ENST00000484112 SLC6A14Q9UN76 642 aa10.51□□□□□ -0.73
CPSF4-213ENST00000484112 KIAA1549LQ6ZVL6 1849 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 CLDN5O00501 218 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 AP5Z1O43299 807 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 OPHN1O60890 802 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 OAS1P00973 400 aaKnown RBP10.5□□□□□ -0.73
CPSF4-213ENST00000484112 ZDHHC11BP0C7U3 371 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 SETSIPP0DME0 302 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 CCDC130P13994 396 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 PON1P27169 355 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 EIF2DP41214 584 aaKnown RBP10.5□□□□□ -0.73
CPSF4-213ENST00000484112 DPP6P42658 865 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 TNFRSF4P43489 277 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 ZNF132P52740 706 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 SLC5A3P53794 718 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 BCAT1P54687 386 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 FAM193AP78312 1265 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 GAD2Q05329 585 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 LRMPQ12912 555 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 SEMA3BQ13214 749 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 DUOXA1Q1HG43 343 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 ANO4Q32M45 955 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 ZNF394Q53GI3 561 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 MIIPQ5JXC2 388 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 PPP1R26Q5T8A7 1209 aaPredicted RBP10.5□□□□□ -0.73
CPSF4-213ENST00000484112 BTBD8Q5XKL5 378 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 TMEM270Q6UE05 265 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 TADA2BQ86TJ2 420 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 ZNF276Q8N554 614 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 ZNF513Q8N8E2 541 aaPredicted RBP10.5□□□□□ -0.73
CPSF4-213ENST00000484112 ELMO3Q96BJ8 720 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms