RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 FAM78AQ5JUQ0 283 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 SEL1L2Q5TEA6 688 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 CWF19L1Q69YN2 538 aaKnown RBP7.27□□□□□ -1.25
BRCA1-216ENST00000484087 TANGO2Q6ICL3 276 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 CC2D1AQ6P1N0 951 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-216ENST00000484087 GAREM2Q75VX8 874 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 PHF13Q86YI8 300 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-216ENST00000484087 PASD1Q8IV76 773 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 SCN4BQ8IWT1 228 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 MCOLN2Q8IZK6 566 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 SIX5Q8N196 739 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 SLC44A3Q8N4M1 653 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 UBR7Q8N806 425 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 TTC16Q8NEE8 873 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 FLCNQ8NFG4 579 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 OR6B3Q8NGW1 331 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 CCDC26Q8TAB7 109 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 TTC8Q8TAM2 541 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 RIN3Q8TB24 985 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 CPA5Q8WXQ8 436 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 PBXIP1Q96AQ6 731 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 CYFIP2Q96F07 1278 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 MS4A14Q96JA4 679 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 ZNF512Q96ME7 567 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-216ENST00000484087 TWNKQ96RR1 684 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 MIS12Q9H081 205 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 EPC1Q9H2F5 836 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 SLITRK6Q9H5Y7 841 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 ASAH2Q9NR71 780 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 PARVAQ9NVD7 372 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 GDAP2Q9NXN4 497 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 ANAPC7Q9UJX3 599 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 KIAA1257Q9ULG3 409 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 STRIP2Q9ULQ0 834 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 PCDHGC3Q9UN70 934 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 DUSP12Q9UNI6 340 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-216ENST00000484087 ANHXE9PGG2 379 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 KRIT1O00522 736 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 GABRDO14764 452 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 SCAMP3O14828 347 aaKnown RBP7.26□□□□□ -1.25
BRCA1-216ENST00000484087 PRAMEF12O95522 483 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 HAPLN1P10915 354 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-216ENST00000484087 COMTP21964 271 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 BDNFP23560 247 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 CETN2P41208 172 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 ASPAP45381 313 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 ALDH1A3P47895 512 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 RNASE9P60153 205 aaKnown RBP7.26□□□□□ -1.25
BRCA1-216ENST00000484087 USP46P62068 366 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 VSNL1P62760 191 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 TSPY1Q01534 308 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 STILQ15468 1287 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 LONRF2Q1L5Z9 754 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 MON1BQ7L1V2 547 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 HDXQ7Z353 690 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 MAATS1Q7Z4T9 603 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 DNAJB7Q7Z6W7 309 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-216ENST00000484087 TMEM150AQ86TG1 271 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 ERICH1Q86X53 443 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 IFT20Q8IY31 132 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 THEM5Q8N1Q8 247 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 RASGEF1CQ8N431 466 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 TOP6BLQ8N6T0 577 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 TMEM105Q8N8V8 129 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 PRSS33Q8NF86 280 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 ZSCAN18Q8TBC5 510 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-216ENST00000484087 PCED1BQ96HM7 432 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 ZFYVE19Q96K21 471 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 LRRC3BQ96PB8 259 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 ZSWIM1Q9BR11 485 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 C11orf70Q9BRQ4 267 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 BCO2Q9BYV7 579 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 FOXQ1Q9C009 403 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 ATXN3LQ9H3M9 355 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 GOLPH3Q9H4A6 298 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 IL21Q9HBE4 155 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 PRM3Q9NNZ6 103 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 RBM12Q9NTZ6 932 aaKnown RBP7.26□□□□□ -1.25
BRCA1-216ENST00000484087 FAM86C1Q9NVL1 165 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 TSR3Q9UJK0 312 aaKnown RBP7.26□□□□□ -1.25
BRCA1-216ENST00000484087 FBXL21Q9UKT6 434 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 DSEQ9UL01 958 aa7.26□□□□□ -1.25
BRCA1-216ENST00000484087 TTC7AQ9ULT0 858 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-216ENST00000484087 FAM170AA1A519 330 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 A8MXQ7 604 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 DDX3YO15523 660 aaKnown RBP7.25□□□□□ -1.25
BRCA1-216ENST00000484087 GFRA3O60609 400 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 C1RP00736 705 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 CALCAP01258 141 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 VDRP11473 427 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 CCDC130P13994 396 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 HMGA1P17096 107 aaKnown RBP7.25□□□□□ -1.25
BRCA1-216ENST00000484087 NPR3P17342 541 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 MMP8P22894 467 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 WARSP23381 471 aaKnown RBP7.25□□□□□ -1.25
BRCA1-216ENST00000484087 RRM1P23921 792 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 BRD2P25440 801 aaKnown RBP7.25□□□□□ -1.25
BRCA1-216ENST00000484087 CTNNA2P26232 953 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 EPHB3P54753 998 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms