RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 ERVFC1P60507 584 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 COPS2P61201 443 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 CBX2Q14781 532 aaPredicted RBP14.57□□□□□ -0.08
SMAD9-204ENST00000483941 ARL13BQ3SXY8 428 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 PABPC1LQ4VXU2 614 aaKnown RBP14.57□□□□□ -0.08
SMAD9-204ENST00000483941 SEL1L2Q5TEA6 688 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 PLPP4Q5VZY2 271 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 GPRIN1Q7Z2K8 1008 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 PSTKQ8IV42 348 aaKnown RBP14.57□□□□□ -0.08
SMAD9-204ENST00000483941 MAP7D3Q8IWC1 876 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 KATNAL2Q8IYT4 538 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 ZNF276Q8N554 614 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 EFHBQ8N7U6 833 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 STKLD1Q8NE28 680 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 EXD1Q8NHP7 514 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 SCAMP5Q8TAC9 235 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 CLEC4CQ8WTT0 213 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 FAM172AQ8WUF8 416 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 TEKT4Q8WW24 435 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 CENPIQ92674 756 aaPredicted RBP14.57□□□□□ -0.08
SMAD9-204ENST00000483941 ATOH1Q92858 354 aaPredicted RBP14.57□□□□□ -0.08
SMAD9-204ENST00000483941 NT5C3BQ969T7 300 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 PGAP3Q96FM1 320 aaPredicted RBP14.57□□□□□ -0.08
SMAD9-204ENST00000483941 TRMT2BQ96GJ1 504 aaKnown RBP14.57□□□□□ -0.08
SMAD9-204ENST00000483941 MYRFLQ96LU7 910 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 TRIM7Q9C029 511 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 L2HGDHQ9H9P8 463 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 CLEC1BQ9P126 229 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 USP15Q9Y4E8 981 aaPredicted RBP14.57□□□□□ -0.08
SMAD9-204ENST00000483941 YIPF1Q9Y548 306 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 MRFAP1Q9Y605 127 aa14.57□□□□□ -0.08
SMAD9-204ENST00000483941 TGM5O43548 720 aa14.56□□□□□ -0.08
SMAD9-204ENST00000483941 LRCH4O75427 683 aa14.56□□□□□ -0.08
SMAD9-204ENST00000483941 ENDOD1O94919 500 aa14.56□□□□□ -0.08
SMAD9-204ENST00000483941 VNN2O95498 520 aa14.56□□□□□ -0.08
SMAD9-204ENST00000483941 RDXP35241 583 aaKnown RBP14.56□□□□□ -0.08
SMAD9-204ENST00000483941 SULT1E1P49888 294 aa14.56□□□□□ -0.08
SMAD9-204ENST00000483941 KPNA1P52294 538 aaPredicted RBP14.56□□□□□ -0.08
SMAD9-204ENST00000483941 OGDHQ02218 1023 aa14.56□□□□□ -0.08
SMAD9-204ENST00000483941 IFRD2Q12894 506 aaPredicted RBP14.56□□□□□ -0.08
SMAD9-204ENST00000483941 CAMK1Q14012 370 aa14.56□□□□□ -0.08
SMAD9-204ENST00000483941 TAF5Q15542 800 aa14.56□□□□□ -0.08
SMAD9-204ENST00000483941 ACBD5Q5T8D3 534 aaPredicted RBP14.56□□□□□ -0.08
SMAD9-204ENST00000483941 LILRA6Q6PI73 481 aa14.56□□□□□ -0.08
SMAD9-204ENST00000483941 RSRC2Q7L4I2 434 aaKnown RBP14.56□□□□□ -0.08
SMAD9-204ENST00000483941 ADGRD2Q7Z7M1 963 aa14.56□□□□□ -0.08
SMAD9-204ENST00000483941 KREMEN2Q8NCW0 462 aa14.56□□□□□ -0.08
SMAD9-204ENST00000483941 ACTRT1Q8TDG2 376 aa14.56□□□□□ -0.08
SMAD9-204ENST00000483941 AUTS2Q8WXX7 1259 aa14.56□□□□□ -0.08
SMAD9-204ENST00000483941 ZNF512Q96ME7 567 aaPredicted RBP14.56□□□□□ -0.08
SMAD9-204ENST00000483941 CFAP57Q96MR6 1250 aa14.56□□□□□ -0.08
SMAD9-204ENST00000483941 NPY6RQ99463 290 aa14.56□□□□□ -0.08
SMAD9-204ENST00000483941 CDCA3Q99618 268 aaPredicted RBP14.56□□□□□ -0.08
SMAD9-204ENST00000483941 GOLPH3Q9H4A6 298 aa14.56□□□□□ -0.08
SMAD9-204ENST00000483941 TRPM5Q9NZQ8 1165 aa14.56□□□□□ -0.08
SMAD9-204ENST00000483941 FBXW11Q9UKB1 542 aa14.56□□□□□ -0.08
SMAD9-204ENST00000483941 TTC7AQ9ULT0 858 aaPredicted RBP14.56□□□□□ -0.08
SMAD9-204ENST00000483941 USP18Q9UMW8 372 aa14.56□□□□□ -0.08
SMAD9-204ENST00000483941 INSL5Q9Y5Q6 135 aa14.56□□□□□ -0.08
SMAD9-204ENST00000483941 MYH10P35580 1976 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 M0QYT0 321 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 DDX3YO15523 660 aaKnown RBP14.55□□□□□ -0.08
SMAD9-204ENST00000483941 CEP104O60308 925 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 SEC24AO95486 1093 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 SLC2A3P11169 496 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 DNAJB1P25685 340 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 MIPP30301 263 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 PEX5P50542 639 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 ZNF135P52742 658 aaPredicted RBP14.55□□□□□ -0.08
SMAD9-204ENST00000483941 ATP11AP98196 1134 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 DEUP1Q05D60 604 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 ZNF252P-AS1Q0IIN9 211 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 TWF1Q12792 350 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 TAF10Q12962 218 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 PDK2Q15119 407 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 PPP2R5EQ16537 467 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 SNX30Q5VWJ9 437 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 SCYL2Q6P3W7 929 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 VSIG1Q86XK7 387 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 PSMG2Q969U7 264 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 ASIC4Q96FT7 647 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 PIWIL1Q96J94 861 aaKnown RBP14.55□□□□□ -0.08
SMAD9-204ENST00000483941 PHF7Q9BWX1 381 aaPredicted RBP14.55□□□□□ -0.08
SMAD9-204ENST00000483941 CRISPLD1Q9H336 500 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 FAM204AQ9H8W3 233 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 PRDM16Q9HAZ2 1276 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 PACSIN2Q9UNF0 486 aaPredicted RBP14.55□□□□□ -0.08
SMAD9-204ENST00000483941 EFR3BQ9Y2G0 817 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 DMXL1Q9Y485 3027 aa14.55□□□□□ -0.08
SMAD9-204ENST00000483941 PTPRZ1P23471 2315 aaPredicted RBP14.54□□□□□ -0.08
SMAD9-204ENST00000483941 GOLGA6L10A0A0M3HER8 536 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 PGRMC1O00264 195 aaKnown RBP14.54□□□□□ -0.08
SMAD9-204ENST00000483941 MDM4O15151 490 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 FANCGO15287 622 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 GLP2RO95838 553 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 TRUB2O95900 331 aaKnown RBP14.54□□□□□ -0.08
SMAD9-204ENST00000483941 ATF6P18850 670 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 HOXA9P31269 272 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 NRIP1P48552 1158 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 GPR15P49685 360 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms