RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 HSPBP1Q9NZL4 362 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 THAP10Q9P2Z0 257 aaPredicted RBP11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 NXF1Q9UBU9 619 aaKnown RBP11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 STK17AQ9UEE5 414 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 NUDT5Q9UKK9 219 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 KIF3AQ9Y496 699 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 MYH10P35580 1976 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 CKAP5Q14008 2032 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 FRMD3A2A2Y4 597 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 H0Y8X5 98 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 AP1G2O75843 785 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 FAM163BP0C2L3 166 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 CCDC130P13994 396 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 TNNI1P19237 187 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 PRKCHP24723 683 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 GJB2P29033 226 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 ACSL1P33121 698 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 SEMG2Q02383 582 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 ALCAMQ13740 583 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 PCSK4Q6UW60 755 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 Q6ZNB5 142 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 SV2BQ7L1I2 683 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 GPRIN1Q7Z2K8 1008 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 SORCS1Q8WY21 1168 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 PRCCQ92733 491 aaPredicted RBP11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 CCDC127Q96BQ5 260 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 SMARCD1Q96GM5 515 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 NUP58Q9BVL2 599 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 NMUR1Q9HB89 426 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 TM9SF3Q9HD45 589 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 CYLDQ9NQC7 956 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 PANK4Q9NVE7 773 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 LSM7Q9UK45 103 aaKnown RBP11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 ANKRD6Q9Y2G4 727 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 SLC27A6Q9Y2P4 619 aa11.47□□□□□ -0.57
SMARCC1-205ENST00000483847 KNTC1P50748 2209 aa11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 ATP8B3O60423 1300 aa11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 E9PAM4 449 aa11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 CBX4O00257 560 aa11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 KIAA0391O15091 583 aaKnown RBP11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 CYP26A1O43174 497 aa11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 PCDHGA12O60330 932 aa11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 KLKB1P03952 638 aa11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 ATP5C1P36542 298 aaKnown RBP11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 ORC1Q13415 861 aa11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 ZNF234Q14588 700 aa11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 SNRNP35Q16560 246 aaKnown RBP11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 FYB2Q5VWT5 728 aa11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 RRAGBQ5VZM2 374 aa11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 ACOT1Q86TX2 421 aa11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 TMPRSS12Q86WS5 348 aa11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 RBBP8NLQ8NC74 664 aaPredicted RBP11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 NXPE2Q96DL1 559 aa11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 CGRRF1Q99675 332 aa11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 SDCBP2Q9H190 292 aa11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 TLR8Q9NR97 1041 aaKnown RBP11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 COMMD8Q9NX08 183 aa11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 FTSJ1Q9UET6 329 aa11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 CLEC4EQ9ULY5 219 aa11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.46□□□□□ -0.57
SMARCC1-205ENST00000483847 TP53BP1Q12888 1972 aaPredicted RBP11.46□□□□□ -0.58
SMARCC1-205ENST00000483847 A0A087X0B3 334 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 SYNCRIPO60506 623 aaKnown RBP11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 STC2O76061 302 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 STAU1O95793 577 aaKnown RBP11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 BMP15O95972 392 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 PENKP01210 267 aaPredicted RBP11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 EPHX1P07099 455 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 ACADMP11310 421 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 GRIA4P48058 902 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 CCT8P50990 548 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 ZNF132P52740 706 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 MAP3K7CLP57077 242 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 CYP24A1Q07973 514 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 PSMD6Q15008 389 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 PRAMEF14Q5SWL7 426 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 TMEM215Q68D42 235 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 SCARA5Q6ZMJ2 495 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 LRRC69Q6ZNQ3 347 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 GATAD2AQ86YP4 633 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 LSM14AQ8ND56 463 aaKnown RBP11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 SLC2A14Q8TDB8 520 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 IGSF8Q969P0 613 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 JAKMIP2Q96AA8 810 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 BIRC7Q96CA5 298 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 PIWIL1Q96J94 861 aaKnown RBP11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 CLIC6Q96NY7 704 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 PANK2Q9BZ23 570 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 PCED1AQ9H1Q7 454 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 CSNK1G1Q9HCP0 422 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 CCDC39Q9UFE4 941 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 HMGXB4Q9UGU5 601 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 FBXO2Q9UK22 296 aaPredicted RBP11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 CLIC4Q9Y696 253 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 MYLKQ15746 1914 aa11.45□□□□□ -0.58
SMARCC1-205ENST00000483847 PLXNA2O75051 1894 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 COL5A1P20908 1838 aaPredicted RBP11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 A0A1W2PQH9 124 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 NPC1O15118 1278 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms