RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 RBM15Q96T37 977 aaKnown RBP eCLIP9.19□□□□□ -0.945e-10■■■□□ 14.7
CDC42SE1-204ENST00000483763 ZNF670Q9BS34 389 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 FAM129AQ9BZQ8 928 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 NRDE2Q9H7Z3 1164 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 POPDC2Q9HBU9 364 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 PSD3Q9NYI0 1048 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 TPX2Q9ULW0 747 aaKnown RBP9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 NOVA2Q9UNW9 492 aaKnown RBP9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 FARP1Q9Y4F1 1045 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 USP3Q9Y6I4 520 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 COL6A3P12111 3177 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 TLDC2A0PJX2 215 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 FOXO6A8MYZ6 492 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 FAM72CH0Y354 149 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 ZBED1O96006 694 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 NCAM1P13591 858 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 CAPN2P17655 700 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 AMPD1P23109 780 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 PBX3P40426 434 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 OR1G1P47890 313 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 IFI35P80217 286 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 YWHAHQ04917 246 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 PLEKHG4Q58EX7 1191 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 FAM72AQ5TYM5 149 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 FAM72DQ6L9T8 149 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 FAM72BQ86X60 149 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 CRIPAKQ8N1N5 446 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 ZCCHC9Q8N567 271 aaKnown RBP9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 RSAD2Q8WXG1 361 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 PRCCQ92733 491 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 DNAI2Q9GZS0 605 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 WDR6Q9NNW5 1121 aaKnown RBP9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 NINJ2Q9NZG7 142 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 FZD10Q9ULW2 581 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 TSC2P49815 1807 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 PRUNE2Q8WUY3 3088 aa9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 ERICH4A6NGS2 130 aa9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 GOLGA6L10A6NI86 522 aa9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 HMGB1P1B2RPK0 211 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 APOL1O14791 398 aa9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 MCF2LO15068 1137 aa9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 TMEM63AO94886 807 aa9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 RBL1P28749 1068 aa9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 MAGOHP61326 146 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 GUCY1A3Q02108 690 aa9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 CAV1Q03135 178 aa9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 RNASELQ05823 741 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 TFDP2Q14188 446 aa9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 LONRF1Q17RB8 773 aa9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 MSS51Q4VC12 460 aa9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 DARS2Q6PI48 645 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 TRMT10CQ7L0Y3 403 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 TP53INP2Q8IXH6 220 aa9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 SLC7A14Q8TBB6 771 aa9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 UROC1Q96N76 676 aa9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 WDR83Q9BRX9 315 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 CNGB3Q9NQW8 809 aa9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 SH3BP1Q9Y3L3 701 aa9.18□□□□□ -0.94
CDC42SE1-204ENST00000483763 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 NR1D1P20393 614 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 CCL23P55773 120 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 EIF3BP55884 814 aaKnown RBP9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 BFSP2Q13515 415 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 FNBP1LQ5T0N5 605 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 EMC10Q5UCC4 262 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 TMEM173Q86WV6 379 aaPredicted RBP9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 METTL23Q86XA0 190 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 NAT8LQ8N9F0 302 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 BBOF1Q8ND07 529 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 CCHCR1Q8TD31 782 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 SPOCK2Q92563 424 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 FRMD8P1Q9BZ68 369 aaPredicted RBP9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 GPR62Q9BZJ7 368 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 TMEM161AQ9NX61 479 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 CTNNAL1Q9UBT7 734 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 ZMYND8Q9ULU4 1186 aaPredicted RBP9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 H7C0C1 242 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 CAPN9O14815 690 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 SHOX2O60902 331 aaPredicted RBP9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 OAZ2O95190 189 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 LTFP02788 710 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 RDXP35241 583 aaKnown RBP9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 MAGEA4P43358 317 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 ATP5OP48047 213 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 ROR1Q01973 937 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 DEUP1Q05D60 604 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 MORF4L2Q15014 288 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 SDHAF4Q5VUM1 108 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 BSPRYQ5W0U4 402 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 NCBP2-AS2Q69YL0 99 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 PM20D1Q6GTS8 502 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 VSIG1Q86XK7 387 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 RELL1Q8IUW5 271 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 TLCD1Q96CP7 247 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 CASD1Q96PB1 797 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 FTHL17Q9BXU8 183 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 CRISPLD2Q9H0B8 497 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 RABEP2Q9H5N1 569 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 SAYSD1Q9NPB0 183 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms