RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 C1orf131Q8NDD1 294 aaKnown RBP18.81■□□□□ 0.6
HDAC6-225ENST00000483506 NEK11Q8NG66 645 aa18.81■□□□□ 0.6
HDAC6-225ENST00000483506 EZH1Q92800 747 aaPredicted RBP18.81■□□□□ 0.6
HDAC6-225ENST00000483506 ASNSD1Q9NWL6 643 aa18.81■□□□□ 0.6
HDAC6-225ENST00000483506 NOCTQ9UK39 431 aaKnown RBP18.81■□□□□ 0.6
HDAC6-225ENST00000483506 CEP83Q9Y592 693 aa18.81■□□□□ 0.6
HDAC6-225ENST00000483506 MYO15AQ9UKN7 3530 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 DMDP11532 3685 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 A0A0A0MRY4 1105 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 LAMTOR5O43504 91 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 LSM8O95777 96 aaKnown RBP18.8■□□□□ 0.6
HDAC6-225ENST00000483506 LATS1O95835 1130 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 GLI1P08151 1106 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 TDGF1P13385 188 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 CORO1AP31146 461 aaKnown RBP18.8■□□□□ 0.6
HDAC6-225ENST00000483506 CCR3P51677 355 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 RING1Q06587 406 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 NNTQ13423 1086 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 PTPN20Q4JDL3 420 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 C12orf40Q86WS4 652 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 TMEM25Q86YD3 366 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 PHTF2Q8N3S3 785 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 CPXM2Q8N436 756 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 TMEM35BQ8NCS4 154 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 NELL1Q92832 810 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 SPAG5Q96R06 1193 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 NLRC4Q9NPP4 1024 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 TJP2Q9UDY2 1190 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 SFMBT1Q9UHJ3 866 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 STOML2Q9UJZ1 356 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 AGO1Q9UL18 857 aaKnown RBP18.8■□□□□ 0.6
HDAC6-225ENST00000483506 PIEZO1Q92508 2521 aa18.8■□□□□ 0.6
HDAC6-225ENST00000483506 A0A1W2PQC6 194 aa18.79■□□□□ 0.6
HDAC6-225ENST00000483506 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.79■□□□□ 0.6
HDAC6-225ENST00000483506 CHURC1-FNTBB4DL54 471 aa18.79■□□□□ 0.6
HDAC6-225ENST00000483506 TEX33O43247 280 aa18.79■□□□□ 0.6
HDAC6-225ENST00000483506 GFPT2O94808 682 aa18.79■□□□□ 0.6
HDAC6-225ENST00000483506 SP9P0CG40 484 aa18.79■□□□□ 0.6
HDAC6-225ENST00000483506 NCAM1P13591 858 aa18.79■□□□□ 0.6
HDAC6-225ENST00000483506 NBL1P41271 181 aa18.79■□□□□ 0.6
HDAC6-225ENST00000483506 STAT1P42224 750 aa18.79■□□□□ 0.6
HDAC6-225ENST00000483506 SNX16P57768 344 aa18.79■□□□□ 0.6
HDAC6-225ENST00000483506 LUZP1Q86V48 1076 aa18.79■□□□□ 0.6
HDAC6-225ENST00000483506 DQX1Q8TE96 717 aaKnown RBP18.79■□□□□ 0.6
HDAC6-225ENST00000483506 ATOH1Q92858 354 aaPredicted RBP18.79■□□□□ 0.6
HDAC6-225ENST00000483506 FAM122AQ96E09 287 aa18.79■□□□□ 0.6
HDAC6-225ENST00000483506 POPDC2Q9HBU9 364 aa18.79■□□□□ 0.6
HDAC6-225ENST00000483506 WDR35Q9P2L0 1181 aa18.79■□□□□ 0.6
HDAC6-225ENST00000483506 VPS13AQ96RL7 3174 aa18.78■□□□□ 0.6
HDAC6-225ENST00000483506 MSI1O43347 362 aaKnown RBP18.78■□□□□ 0.6
HDAC6-225ENST00000483506 CACNG3O60359 315 aa18.78■□□□□ 0.6
HDAC6-225ENST00000483506 ERBB2P04626 1255 aa18.78■□□□□ 0.6
HDAC6-225ENST00000483506 HMBSP08397 361 aa18.78■□□□□ 0.6
HDAC6-225ENST00000483506 CHRM1P11229 460 aaPredicted RBP18.78■□□□□ 0.6
HDAC6-225ENST00000483506 CHKAP35790 457 aa18.78■□□□□ 0.6
HDAC6-225ENST00000483506 GABRB2P47870 512 aa18.78■□□□□ 0.6
HDAC6-225ENST00000483506 SLC6A11P48066 632 aa18.78■□□□□ 0.6
HDAC6-225ENST00000483506 YWHAZP63104 245 aaKnown RBP18.78■□□□□ 0.6
HDAC6-225ENST00000483506 CDR2Q01850 454 aa18.78■□□□□ 0.6
HDAC6-225ENST00000483506 FILIP1LQ4L180 1135 aa18.78■□□□□ 0.6
HDAC6-225ENST00000483506 OLFML1Q6UWY5 402 aa18.78■□□□□ 0.6
HDAC6-225ENST00000483506 ZDHHC17Q8IUH5 632 aa18.78■□□□□ 0.6
HDAC6-225ENST00000483506 DENND1CQ8IV53 801 aa18.78■□□□□ 0.6
HDAC6-225ENST00000483506 CCDC26Q8TAB7 109 aa18.78■□□□□ 0.6
HDAC6-225ENST00000483506 IPO4Q8TEX9 1081 aaKnown RBP18.78■□□□□ 0.6
HDAC6-225ENST00000483506 FAM149B1Q96BN6 582 aa18.78■□□□□ 0.6
HDAC6-225ENST00000483506 PIWIL1Q96J94 861 aaKnown RBP18.78■□□□□ 0.6
HDAC6-225ENST00000483506 PCMTD1Q96MG8 357 aaPredicted RBP18.78■□□□□ 0.6
HDAC6-225ENST00000483506 NAP1L5Q96NT1 182 aaPredicted RBP18.78■□□□□ 0.6
HDAC6-225ENST00000483506 SLC2A13Q96QE2 648 aa18.78■□□□□ 0.6
HDAC6-225ENST00000483506 PNKPQ96T60 521 aa18.78■□□□□ 0.6
HDAC6-225ENST00000483506 MYO6Q9UM54 1294 aa18.78■□□□□ 0.6
HDAC6-225ENST00000483506 NAALADL1Q9UQQ1 740 aa18.78■□□□□ 0.6
HDAC6-225ENST00000483506 PROB1E7EW31 1015 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 K7EQS6 105 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 GFRA2O00451 464 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 HSF2BPO75031 334 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 RNF40O75150 1001 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 TULP3O75386 442 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 PENKP01210 267 aaPredicted RBP18.77■□□□□ 0.6
HDAC6-225ENST00000483506 IGLV3-25P01717 112 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 MMEP08473 750 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 SCNN1AP37088 669 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 HARS2P49590 506 aaKnown RBP18.77■□□□□ 0.6
HDAC6-225ENST00000483506 TPM4P67936 248 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 NOMO3P69849 1222 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 MESP2Q0VG99 397 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 EIF4EBP2Q13542 120 aaPredicted RBP18.77■□□□□ 0.6
HDAC6-225ENST00000483506 NR1I3Q14994 352 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 ANO4Q32M45 955 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 PREPLQ4J6C6 727 aaPredicted RBP18.77■□□□□ 0.6
HDAC6-225ENST00000483506 EFHC1Q5JVL4 640 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 TAF3Q5VWG9 929 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 NUGGCQ68CJ6 796 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 FAM183BPQ6ZVS7 135 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 SLC26A9Q7LBE3 791 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 ZNF397Q8NF99 534 aaPredicted RBP18.77■□□□□ 0.6
HDAC6-225ENST00000483506 AZIN2Q96A70 460 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 P2RY11Q96G91 374 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 SLC39A13Q96H72 371 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms