RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 MAPTP10636 758 aaKnown RBP12.2□□□□□ -0.46
VTI1A-205ENST00000483122 COX4I1P13073 169 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 ZNF23P17027 643 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 ALDH3B2P48448 385 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 SMTNL2Q2TAL5 461 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 FASTKD1Q53R41 847 aaKnown RBP12.2□□□□□ -0.46
VTI1A-205ENST00000483122 PPP6R3Q5H9R7 873 aaPredicted RBP12.2□□□□□ -0.46
VTI1A-205ENST00000483122 CPNE9Q8IYJ1 553 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 ADGRF2Q8IZF7 708 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 ZNF516Q92618 1163 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 CMTM5Q96DZ9 223 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 RANBP9Q96S59 729 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 KCNK16Q96T55 309 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 PKP2Q99959 881 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 ZNF577Q9BSK1 485 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 AGTPBP1Q9UPW5 1226 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 H0YIN7 160 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 GSRP00390 522 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 CFBP00751 764 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 CSH1P0DML2 217 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 CSH2P0DML3 217 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 NPR1P16066 1061 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 GNA15P30679 374 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 SLC1A6P48664 564 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 CLCN2P51788 898 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 MCCD1P59942 119 aaPredicted RBP12.2□□□□□ -0.46
VTI1A-205ENST00000483122 TGFB2P61812 414 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 CYP24A1Q07973 514 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 PDAP1Q13442 181 aaKnown RBP12.2□□□□□ -0.46
VTI1A-205ENST00000483122 ZNF362Q5T0B9 420 aaPredicted RBP12.2□□□□□ -0.46
VTI1A-205ENST00000483122 ENOSF1Q7L5Y1 443 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 VCPIP1Q96JH7 1222 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 COX4I2Q96KJ9 171 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 MFSD14AQ96MC6 490 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 PLAC1Q9HBJ0 212 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 HMX2A2RU54 273 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 FUOMA2VDF0 154 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 TMX2-CTNND1H3BSU7 103 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 WDR46O15213 610 aaKnown RBP12.19□□□□□ -0.46
VTI1A-205ENST00000483122 XPOTO43592 962 aaKnown RBP12.19□□□□□ -0.46
VTI1A-205ENST00000483122 DCXO43602 365 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 ZBED1O96006 694 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 FGF3P11487 239 aaPredicted RBP12.19□□□□□ -0.46
VTI1A-205ENST00000483122 HOXA10P31260 410 aaPredicted RBP12.19□□□□□ -0.46
VTI1A-205ENST00000483122 PHKA2P46019 1235 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 NDST2P52849 883 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 ATXN3P54252 364 aaPredicted RBP12.19□□□□□ -0.46
VTI1A-205ENST00000483122 C1QBPQ07021 282 aaKnown RBP12.19□□□□□ -0.46
VTI1A-205ENST00000483122 KCNT1Q5JUK3 1230 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 MROH9Q5TGP6 573 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 LRRC38Q5VT99 294 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 MBLAC2Q68D91 279 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 TMEM270Q6UE05 265 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 ADCY4Q8NFM4 1077 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 MASTLQ96GX5 879 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 PPP1R10Q96QC0 940 aaKnown RBP12.19□□□□□ -0.46
VTI1A-205ENST00000483122 KLC2Q9H0B6 622 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 EBF1Q9UH73 591 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 COQ6Q9Y2Z9 468 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 PCDHB4Q9Y5E5 795 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 ZBTB14O43829 449 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 PSMC3P17980 439 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 XRCC1P18887 633 aaPredicted RBP12.19□□□□□ -0.46
VTI1A-205ENST00000483122 ACO1P21399 889 aaKnown RBP12.19□□□□□ -0.46
VTI1A-205ENST00000483122 KCNA4P22459 653 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 ARRB2P32121 409 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 CRHR1P34998 444 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 BRDTQ58F21 947 aaPredicted RBP12.19□□□□□ -0.46
VTI1A-205ENST00000483122 STYK1Q6J9G0 422 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 SLC39A4Q6P5W5 647 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 ARCQ7LC44 396 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 CATSPER1Q8NEC5 780 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 TMC2Q8TDI7 906 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 CCDC97Q96F63 343 aaPredicted RBP12.19□□□□□ -0.46
VTI1A-205ENST00000483122 VPS50Q96JG6 964 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 HNRNPABQ99729 332 aaKnown RBP12.19□□□□□ -0.46
VTI1A-205ENST00000483122 HAUS8Q9BT25 410 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 TEKT3Q9BXF9 490 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 ARMC7Q9H6L4 198 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 PNPLA8Q9NP80 782 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 SLC38A7Q9NVC3 462 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 MKS1Q9NXB0 559 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 STK39Q9UEW8 545 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 ARHGAP26Q9UNA1 814 aa12.19□□□□□ -0.46
VTI1A-205ENST00000483122 BRCA1P38398 1863 aaKnown RBP12.18□□□□□ -0.46
VTI1A-205ENST00000483122 FAM189A1O60320 539 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 FUCA1P04066 466 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 EPHA3P29320 983 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 RARRES1P49788 294 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 SLC5A3P53794 718 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 YWHAZP63104 245 aaKnown RBP12.18□□□□□ -0.46
VTI1A-205ENST00000483122 DCUN1D2Q6PH85 259 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 B3GNT9Q6UX72 402 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 TRIM72Q6ZMU5 477 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 SIAH1Q8IUQ4 282 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 CHERPQ8IWX8 916 aaKnown RBP12.18□□□□□ -0.46
VTI1A-205ENST00000483122 KBTBD7Q8WVZ9 684 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 NLRP7Q8WX94 980 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 DCUN1D5Q9BTE7 237 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 DDX56Q9NY93 547 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms