RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 POLD4Q9HCU8 107 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 NMRK2Q9NPI5 230 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 SEPT11Q9NVA2 429 aaKnown RBP8.15□□□□□ -1.1
SNX13-208ENST00000482558 VPS18Q9P253 973 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 CTTNBP2NLQ9P2B4 639 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 NDOR1Q9UHB4 597 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 MTUS1Q9ULD2 1270 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 UTP11Q9Y3A2 253 aaKnown RBP8.15□□□□□ -1.1
SNX13-208ENST00000482558 NOC2LQ9Y3T9 749 aaKnown RBP8.15□□□□□ -1.1
SNX13-208ENST00000482558 PCDHB2Q9Y5E7 798 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 ZNF541Q9H0D2 1346 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 GOLGA6L10A6NI86 522 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 K7ERI5 159 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 PODXLO00592 558 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 BUB1BO60566 1050 aaPredicted RBP8.14□□□□□ -1.11
SNX13-208ENST00000482558 USP2O75604 605 aaPredicted RBP8.14□□□□□ -1.11
SNX13-208ENST00000482558 CYP1A2P05177 515 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 CTNNA2P26232 953 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 CHRNA3P32297 505 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 ARL2P36404 184 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 MAPK9P45984 424 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 RXRGP48443 463 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 YARSP54577 528 aaKnown RBP8.14□□□□□ -1.11
SNX13-208ENST00000482558 IRX3P78415 501 aaPredicted RBP8.14□□□□□ -1.11
SNX13-208ENST00000482558 GUCY2DQ02846 1103 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 PRPF4BQ13523 1007 aaKnown RBP8.14□□□□□ -1.11
SNX13-208ENST00000482558 INAVAQ3KP66 663 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 CCDC92Q53HC0 331 aaPredicted RBP8.14□□□□□ -1.11
SNX13-208ENST00000482558 C1orf220Q5T0J3 134 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 SEL1L2Q5TEA6 688 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 PLA2G4FQ68DD2 849 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 GJB7Q6PEY0 223 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 C16orf54Q6UWD8 224 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 METTL7BQ6UX53 244 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 CHST15Q7LFX5 561 aaPredicted RBP8.14□□□□□ -1.11
SNX13-208ENST00000482558 PLPPR4Q7Z2D5 763 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 SAPCD2Q86UD0 394 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 CBWD2Q8IUF1 395 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 CCDC60Q8IWA6 550 aaPredicted RBP8.14□□□□□ -1.11
SNX13-208ENST00000482558 FAM13CQ8NE31 585 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 SLC7A14Q8TBB6 771 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 PSPC1Q8WXF1 523 aaKnown RBP8.14□□□□□ -1.11
SNX13-208ENST00000482558 SEPT1Q8WYJ6 367 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 KLHL6Q8WZ60 621 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 SEC14L1Q92503 715 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 PSMB7Q99436 277 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 SH3GL2Q99962 352 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 IMPG2Q9BZV3 1241 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 TSPYL1Q9H0U9 437 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 BCAS3Q9H6U6 928 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 EPB41L5Q9HCM4 733 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 HOMER3Q9NSC5 361 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 FEZ2Q9UHY8 353 aaPredicted RBP8.14□□□□□ -1.11
SNX13-208ENST00000482558 NOCTQ9UK39 431 aaKnown RBP8.14□□□□□ -1.11
SNX13-208ENST00000482558 AJAP1Q9UKB5 411 aaPredicted RBP8.14□□□□□ -1.11
SNX13-208ENST00000482558 AGO2Q9UKV8 859 aaKnown RBP8.14□□□□□ -1.11
SNX13-208ENST00000482558 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.14□□□□□ -1.11
SNX13-208ENST00000482558 SSC5DA1L4H1 1573 aa8.14□□□□□ -1.11
SNX13-208ENST00000482558 A0A0G2JLL6 359 aaPredicted RBP8.13□□□□□ -1.11
SNX13-208ENST00000482558 SRRM3A6NNA2 597 aaPredicted RBP8.13□□□□□ -1.11
SNX13-208ENST00000482558 ANKRD63C9JTQ0 380 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 H3BQF6 201 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 NDC80O14777 642 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 ASAP2O43150 1006 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 TLR5O60602 858 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 DNAJA2O60884 412 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 LRRN2O75325 713 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 MAFO75444 373 aaPredicted RBP8.13□□□□□ -1.11
SNX13-208ENST00000482558 SYF2O95926 243 aaKnown RBP8.13□□□□□ -1.11
SNX13-208ENST00000482558 ADRB2P07550 413 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 ZBTB48P10074 688 aaPredicted RBP8.13□□□□□ -1.11
SNX13-208ENST00000482558 FGFR1P11362 822 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 CYP11B1P15538 503 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 RHCEP18577 417 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 ACTN2P35609 894 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 HSPA9P38646 679 aaKnown RBP8.13□□□□□ -1.11
SNX13-208ENST00000482558 USP8P40818 1118 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 GRK6P43250 576 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 STAT5BP51692 787 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 CDR1P51861 262 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 EIF3BP55884 814 aaKnown RBP8.13□□□□□ -1.11
SNX13-208ENST00000482558 PTENP60484 403 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 YWHAEP62258 255 aaKnown RBP8.13□□□□□ -1.11
SNX13-208ENST00000482558 DLG4P78352 724 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 RHDQ02161 417 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 MAP2K1Q02750 393 aaPredicted RBP8.13□□□□□ -1.11
SNX13-208ENST00000482558 PPIL2Q13356 520 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 VGLL4Q14135 290 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 TFDP1Q14186 410 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 KYAT1Q16773 422 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 ZACNQ401N2 412 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 LIN9Q5TKA1 542 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 EMC10Q5UCC4 262 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 ACAD10Q6JQN1 1059 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 C15orf39Q6ZRI6 1047 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 SYDE1Q6ZW31 735 aaPredicted RBP8.13□□□□□ -1.11
SNX13-208ENST00000482558 NLRC3Q7RTR2 1065 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 PRRT2Q7Z6L0 340 aaPredicted RBP8.13□□□□□ -1.11
SNX13-208ENST00000482558 ARHGEF19Q8IW93 802 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 ZBTB8OSQ8IWT0 167 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms